Os07g0131000

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Revision as of 08:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0131000| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001065364.1 GI:115470460 GeneID:4342331|...")
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Gene Name

Os07g0131000

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001065364.1 GI:115470460 GeneID:4342331

Length

5975 bp

Definition

Oryza sativa Japonica Group Os07g0131000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1654917..1660891

Sequence Coding Region

1654917..1656923,1658757..1658810,1659128..1660891

Expression

GEO Profiles:Os07g0131000

Genome Context

<gbrowseImage1> name=NC_008400:1654917..1660891 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1654917..1660891 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcatctgtccctccttttacccttcatcgccctagccctaaaccttgccatcaccatgagcgaggaccagttcgtctattcgggcttctccggcagaaacctcacccttgatggtgcagcaacagttacagatgatggggttcttgagctgaccaatcgcaccgtccacatcaaaggccatgcgttctacccaactccatggcaattcaggaagacgcccaacgggacggtgcaatccttctcaattaactttgtgtttggcatgattcctgtctactctaatgaaaaatgtaccgatggcatgactttcgtgatctctccaaccagtgatatgtcaagtgctcaggactcccaatacttgggtctactcaacaaaacatcagatggaaaagcaagcaaccacatttttgcagtcgagcttgatagtagccaaaataccgagttccacgacatcgacgacaaccacgttggcatcgacatcaacaatctcacctcagttcaatctcggccagctggtttctatagtgataacaagagtatcttcaacaatttgtccctctgtagctacaagccaatgcaagtatgggttgactacaacgaagacaccacacagatcaaggtgaccatggctcccattgaggtaggcaaaccattgaggccactgttgtcagaaattcataacctctcacttgtgctagaagaaccatcctatatcggcttctcagcttcaactggtccaatcaacacattatattgtgtgctcggattgagcttgggtataaaccgtcctgccccagccattgacttatccaaattaccaaaactacctcgtgttagcccaaaaccacggactaaactactagagatcattctaccaattgccacagcaacattcattctcatagtgggaaccaccattgttcttttggtacggaggcgaatgaggtacgctgagctacatgaagattgggaggctgagtttgggccacaccgcttctcatataaggatctgtttcatgctacagacggatttaagaataggaatctacttggtctaggaggatttgggaaggtgtataaaggtgtgcttccaacttctaagttgcatgttgctgtgaaaagggtgtcccatgattcaaagcaaggaatgaaggagtttatcgctgagattgttagtatcggccgccttcgacatcgcaatctcgtgcagttacttggttattgcaggagaaaaggtgaactattattggtatatgaatatatgccgaatggtagtcttgataagtacttgtactgcgaagatagcaaacctacgcttgattgggctcagaggtttcaaatcatcaaaggtgttgcatctggcttgttttaccttcatgataggtgggaaaaaattgtcatccaccgtgatgttaaagcaagtaatgtgctccttgatggtgaaatgaacggtcgcctaggtgattttggccttgcaaagttatatgaccatggagcagacccgcaaacaacgcatgtagtcggtactatgggatacctagctccagagctcgcacgtaccggtaaggcaacacctctaacagatgtgtatgcttttggcatttttatccttgaggtaacatgtgggcaaagacctattgacaattatgcagatgacaattcacaaatgttaattgattgtgttgttgagcattggcacaaaggatcactcacaaacatgctagacaagcggttacttggtgactatgatgcagatgagttctcttttttcaacacatttacctcttatgcaagggttctgctgttagatcttttcttcttcctcttcatctctaatctttcagctctcgccaccggtgaagaccaattcatatactctggcttcaatggtgctaacctcaccctcgacggcgtggcctcggtaacaccagatggcctgcttaagttgaccaacggaaccttacggctccaaggccatgcctttcacccaactccattcagtttcaagaagaaacccaatggaacagtgaattcctttgctgtctcctacatatttgccatctactgtctccggcctgtcatctgcggccatggcatagcttttgttgtttccgtgagcaaaaacttctcaaccgcaatggcaagccagtaccttggccttataaatgaccacaacaacggcgatccaacaaaccatttcttcgctatcgagctcgacacgaaccaaaatgatgagttcaacgatgtcaataacaaccatgttggaatcgacatcaacagtcttacatcactgaactccagcagcgtgggatactacacagacagtaatggtaacttcaacaacattacactcactagttacaagatgatgcaagtgtggctagaatacaatggggacaacagacagatcaatgtgaccttagctccaataaaaatggccaagcctgttaagccattactctctacctactatgacctctcaacagtgctcacagacatggcatatgttggattctcatcatcaacaggctcattcgttgcgcggcattatgtgcttggctggagttttggcatcaataaacctgcaccagccattgatatcagtaagttgccaaagctaccttatgaaggtgagaaaacccattccaaggtcttggaaatcactctgccaatagccacagcaacatttgttcttgcaatgatagctctcatcattctactcatccgaaggagattaaggtatgctgagatacgagaagattgggaagttgaatttgggccgcatagattctcatataaggatttgttttgtgctacggaaggatttaagaacaagaatctactaggaataggagggtttggaagggtatacaagggactacttccaacgtctaaattggagattgctgtgaagaggatctctcatgactccaaccagggtatgaaggaatttgttgctgagatagtcagtataggtcacctccaacaccgcaatcttgtgcagttacatggctactgccggcgaaaaagtgaacttattttagtgtatgattatatgtccaatggaagtcttgacaagcatttgtatggtcaagagaacaattctactttgacatgggcccaaagattccaaataataaaagatattgcatctggattgctttatctccatgaggaatgggagaaagtaatactccatcgagacatcaagccaagcaatatacttctcgatgacaacatgaatggacgactaggcgattttggcctagcaaggttatatgaccatggaaccgaccctcaaaccacacatgttgttggtaccataggatacctagctcctgagctagcacgaactagcaaagcaactccccttaccgatgtatttgcctttggcatgtttgttcttgaagtcacctgtgggcgaaagccgattgaccacactgcacaagacaatcaactgatgttggtagattgggtgcttcattgttggcaccaaggatttctaaatgatgcagtggatatcaaactccaaggtgtctacaatattgatgaggcgtgcctagctctgaagttaggactgctgtgtgcacaccctttcatcaataaaagacccagcatgaggcatgttacgcagattctcaatagagagatggaactaccagagctaacaccaacacacatgagcttcaacatgctctccttgatgcagaaccaaggttttgatccagagaccatgacaaaccagtttctaatatcaaacagcacactatctgacctctcagaagttagatctcatacatggtctccctatgatatttaa</cdnaseq>

Protein Sequence

<aaseq>MEHLSLLLPFIALALNLAITMSEDQFVYSGFSGRNLTLDGAATV TDDGVLELTNRTVHIKGHAFYPTPWQFRKTPNGTVQSFSINFVFGMIPVYSNEKCTDG MTFVISPTSDMSSAQDSQYLGLLNKTSDGKASNHIFAVELDSSQNTEFHDIDDNHVGI DINNLTSVQSRPAGFYSDNKSIFNNLSLCSYKPMQVWVDYNEDTTQIKVTMAPIEVGK PLRPLLSEIHNLSLVLEEPSYIGFSASTGPINTLYCVLGLSLGINRPAPAIDLSKLPK LPRVSPKPRTKLLEIILPIATATFILIVGTTIVLLVRRRMRYAELHEDWEAEFGPHRF SYKDLFHATDGFKNRNLLGLGGFGKVYKGVLPTSKLHVAVKRVSHDSKQGMKEFIAEI VSIGRLRHRNLVQLLGYCRRKGELLLVYEYMPNGSLDKYLYCEDSKPTLDWAQRFQII KGVASGLFYLHDRWEKIVIHRDVKASNVLLDGEMNGRLGDFGLAKLYDHGADPQTTHV VGTMGYLAPELARTGKATPLTDVYAFGIFILEVTCGQRPIDNYADDNSQMLIDCVVEH WHKGSLTNMLDKRLLGDYDADEFSFFNTFTSYARVLLLDLFFFLFISNLSALATGEDQ FIYSGFNGANLTLDGVASVTPDGLLKLTNGTLRLQGHAFHPTPFSFKKKPNGTVNSFA VSYIFAIYCLRPVICGHGIAFVVSVSKNFSTAMASQYLGLINDHNNGDPTNHFFAIEL DTNQNDEFNDVNNNHVGIDINSLTSLNSSSVGYYTDSNGNFNNITLTSYKMMQVWLEY NGDNRQINVTLAPIKMAKPVKPLLSTYYDLSTVLTDMAYVGFSSSTGSFVARHYVLGW SFGINKPAPAIDISKLPKLPYEGEKTHSKVLEITLPIATATFVLAMIALIILLIRRRL RYAEIREDWEVEFGPHRFSYKDLFCATEGFKNKNLLGIGGFGRVYKGLLPTSKLEIAV KRISHDSNQGMKEFVAEIVSIGHLQHRNLVQLHGYCRRKSELILVYDYMSNGSLDKHL YGQENNSTLTWAQRFQIIKDIASGLLYLHEEWEKVILHRDIKPSNILLDDNMNGRLGD FGLARLYDHGTDPQTTHVVGTIGYLAPELARTSKATPLTDVFAFGMFVLEVTCGRKPI DHTAQDNQLMLVDWVLHCWHQGFLNDAVDIKLQGVYNIDEACLALKLGLLCAHPFINK RPSMRHVTQILNREMELPELTPTHMSFNMLSLMQNQGFDPETMTNQFLISNSTLSDLS EVRSHTWSPYDI</aaseq>

Gene Sequence

<dnaseqindica>3969..5975#2082..2135#1..1764#atggagcatctgtccctccttttacccttcatcgccctagccctaaaccttgccatcaccatgagcgaggaccagttcgtctattcgggcttctccggcagaaacctcacccttgatggtgcagcaacagttacagatgatggggttcttgagctgaccaatcgcaccgtccacatcaaaggccatgcgttctacccaactccatggcaattcaggaagacgcccaacgggacggtgcaatccttctcaattaactttgtgtttggcatgattcctgtctactctaatgaaaaatgtaccgatggcatgactttcgtgatctctccaaccagtgatatgtcaagtgctcaggactcccaatacttgggtctactcaacaaaacatcagatggaaaagcaagcaaccacatttttgcagtcgagcttgatagtagccaaaataccgagttccacgacatcgacgacaaccacgttggcatcgacatcaacaatctcacctcagttcaatctcggccagctggtttctatagtgataacaagagtatcttcaacaatttgtccctctgtagctacaagccaatgcaagtatgggttgactacaacgaagacaccacacagatcaaggtgaccatggctcccattgaggtaggcaaaccattgaggccactgttgtcagaaattcataacctctcacttgtgctagaagaaccatcctatatcggcttctcagcttcaactggtccaatcaacacattatattgtgtgctcggattgagcttgggtataaaccgtcctgccccagccattgacttatccaaattaccaaaactacctcgtgttagcccaaaaccacggactaaactactagagatcattctaccaattgccacagcaacattcattctcatagtgggaaccaccattgttcttttggtacggaggcgaatgaggtacgctgagctacatgaagattgggaggctgagtttgggccacaccgcttctcatataaggatctgtttcatgctacagacggatttaagaataggaatctacttggtctaggaggatttgggaaggtgtataaaggtgtgcttccaacttctaagttgcatgttgctgtgaaaagggtgtcccatgattcaaagcaaggaatgaaggagtttatcgctgagattgttagtatcggccgccttcgacatcgcaatctcgtgcagttacttggttattgcaggagaaaaggtgaactattattggtatatgaatatatgccgaatggtagtcttgataagtacttgtactgcgaagatagcaaacctacgcttgattgggctcagaggtttcaaatcatcaaaggtgttgcatctggcttgttttaccttcatgataggtgggaaaaaattgtcatccaccgtgatgttaaagcaagtaatgtgctccttgatggtgaaatgaacggtcgcctaggtgattttggccttgcaaagttatatgaccatggagcagacccgcaaacaacgcatgtagtcggtactatgggatacctagctccagagctcgcacgtaccggtaaggcaacacctctaacagatgtgtatgcttttggcatttttatccttgaggtaacatgtgggcaaagacctattgacaattatgcagatgacaattcacaaatgttaattgattgtgttgttgagcattggcacaaaggatcactcacaaacatgctagacaagcggttacttggtgactatgatgcagatgaggtatgtcttgtgttaaagctgggtttactgtgtgcacatccattttgcaaatcaaggcccagtatgcggcaagtcatgcaataccttgatggtgacaaaccactcccagagttgatgccaacaaacttgagttacagcatgttggctgtaatgcagaacaaaggtttcgagcaatatacatcattgccttccatagcaagcagcagtgacataacatctagcatctcaagtggaagatagcatatatagttggagtctccaagggccatgcaaacaacacatattacattcaccaattctctgtttttttttatcagttctcttttttcaacacatttacctcttatgcaagggttctgctgttagatcttgtaagtacttcctacttgtatatatttcaagttcaagtactactaggtaaactgcaaatcttatatccttatgtgcactgcagatgcagatatatgagatattaatcagatatataatgctgtgattcatattttcaactaaatatatactactgtaacgtccctactctctctctctctctctctctctctctagattatgataatattgttgctctctctgcctgctccactggggtaaaaaatcaaagtgtatattttcagcactctgaactctgaaaatcatcaatctggagagctaatgggtttcagtgggcatgtatgcagcacaatactgcatccctgatgcctgctgattcagatatcactttggcatatcaaagaactcccagcttgtaggtgaattcagctcttcacttcctggatattacatctaaaaccatgtctgtgtaattcagaatattgacatcctgaagatatttctacataactgaatattgatatattggtaaaaaaactgaatatagacatagttttagcctagcttaaacttgtcaaatttaaacatacaaaatttaaaaagtgcttctctaaagattcataactagacatgtaagttttttttttaaaaaaaaaaaagactatacatgcggttacatgtaattaatagaaaaaaaaccaaagatttaattgaaagtcatcagtctttgggaccaaatgaaaacccattgcagacgcaatgggcaaacagactaaattaacttcgatccttagatccctctgccttgggtaattaaacttgggtcaattcagtcaagactatatgagcatgatgatgttactacagattgtttaagaggtcaatatccctgtcaaagatgctgtcacaatttaatttggtagcacagacaacacttgtgataactagcctacacatcaggttccttgaatcctaggcaagcttcaacagtcataactaagaaatatttgttcatacactcaacatagcattcattaatcatgttcttatttggtaggcctgaggtcgaagaagccgtccacaacagcattaataataaaacttttattgctgttcattatttgcccttcttttaataaatgaatgggaaaattctcctattttgagttcagccctttgcttacgataccagcctttctcaatcaaatggctcaaaattaataacagtttcaaggaggccccctgatgcaagtgcctagactggtctgaaaaagatgcagagatgaaaaggagagaggcagctaattttaagtagtagaaagtgttccttttgcaacaggttctttatttttttattttataaggcaattaactactgagggagcaatacatcattgaatgaaaacaaacttgaaaaataagagcaagcatgcagtacaatttattcagaaaatccagttcgagaatggttaaaaaaaatgtgagtgacaggaaacattaaaggcaataacctgaatttcccctgaaattattagtactctattaattttggacgctctgcaacctgtagataattattcttgttcagacttcagaggatcctttaggagaccctgtccaaacaaatttcgttttcagtatacctaattacttgtcccagatcataacacctatgggaaaaagcagatagtagacgactcccataaaaccaagccatacctacggcctaggcaaatgcaaaatataaagtgccaaatggagagcaagattcagtactagtgaagcttttcttgcattttcattgggtcactgaagctcatgctgccatgaatcatttatcctatcttctacagttcttcttcctcttcatctctaatctttcagctctcgccaccggtgaagaccaattcatatactctggcttcaatggtgctaacctcaccctcgacggcgtggcctcggtaacaccagatggcctgcttaagttgaccaacggaaccttacggctccaaggccatgcctttcacccaactccattcagtttcaagaagaaacccaatggaacagtgaattcctttgctgtctcctacatatttgccatctactgtctccggcctgtcatctgcggccatggcatagcttttgttgtttccgtgagcaaaaacttctcaaccgcaatggcaagccagtaccttggccttataaatgaccacaacaacggcgatccaacaaaccatttcttcgctatcgagctcgacacgaaccaaaatgatgagttcaacgatgtcaataacaaccatgttggaatcgacatcaacagtcttacatcactgaactccagcagcgtgggatactacacagacagtaatggtaacttcaacaacattacactcactagttacaagatgatgcaagtgtggctagaatacaatggggacaacagacagatcaatgtgaccttagctccaataaaaatggccaagcctgttaagccattactctctacctactatgacctctcaacagtgctcacagacatggcatatgttggattctcatcatcaacaggctcattcgttgcgcggcattatgtgcttggctggagttttggcatcaataaacctgcaccagccattgatatcagtaagttgccaaagctaccttatgaaggtgagaaaacccattccaaggtcttggaaatcactctgccaatagccacagcaacatttgttcttgcaatgatagctctcatcattctactcatccgaaggagattaaggtatgctgagatacgagaagattgggaagttgaatttgggccgcatagattctcatataaggatttgttttgtgctacggaaggatttaagaacaagaatctactaggaataggagggtttggaagggtatacaagggactacttccaacgtctaaattggagattgctgtgaagaggatctctcatgactccaaccagggtatgaaggaatttgttgctgagatagtcagtataggtcacctccaacaccgcaatcttgtgcagttacatggctactgccggcgaaaaagtgaacttattttagtgtatgattatatgtccaatggaagtcttgacaagcatttgtatggtcaagagaacaattctactttgacatgggcccaaagattccaaataataaaagatattgcatctggattgctttatctccatgaggaatgggagaaagtaatactccatcgagacatcaagccaagcaatatacttctcgatgacaacatgaatggacgactaggcgattttggcctagcaaggttatatgaccatggaaccgaccctcaaaccacacatgttgttggtaccataggatacctagctcctgagctagcacgaactagcaaagcaactccccttaccgatgtatttgcctttggcatgtttgttcttgaagtcacctgtgggcgaaagccgattgaccacactgcacaagacaatcaactgatgttggtagattgggtgcttcattgttggcaccaaggatttctaaatgatgcagtggatatcaaactccaaggtgtctacaatattgatgaggcgtgcctagctctgaagttaggactgctgtgtgcacaccctttcatcaataaaagacccagcatgaggcatgttacgcagattctcaatagagagatggaactaccagagctaacaccaacacacatgagcttcaacatgctctccttgatgcagaaccaaggttttgatccagagaccatgacaaaccagtttctaatatcaaacagcacactatctgacctctcagaagttagatctcatacatggtctccctatgatatttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0131000, RefSeq:Os07g0131000