Os07g0131400

From RiceWiki
Revision as of 08:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0131400| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001188109.1 GI:297725348 GeneID:9269147|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0131400

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001188109.1 GI:297725348 GeneID:9269147

Length

4128 bp

Definition

Oryza sativa Japonica Group Os07g0131400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1676981..1681108

Sequence Coding Region

1676981..1677003,1679344..1681108

Expression

GEO Profiles:Os07g0131400

Genome Context

<gbrowseImage1> name=NC_008400:1676981..1681108 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1676981..1681108 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcatttagcctgcttcctcctcttcctaacatccttcaccacggtcagtattggacaggaccagttcatctacaacggcttctccggcagcaaccttatccttgatggcacagccatggtaacaccaaacggaatccttgagcttaccaatggcgcaagtacctacgaaacaagctacgccctctacccgactccatggcaatttctgaaggtaccattacagtccttctcagtcaactttgtgctcttcatggctccttctattagatgtcccgacagcatggctttcatgatatttccgagcaagggcctcaagaatgatcagagggagagcaatcttgcagttaattttttaagttgccaagacaaaaggtttctggagaacaacgagaacgacatcagcatttctatcaacagtagtttcagcagaccgctagagacccatcctgctggcttctatgatgacaagaacggcattttcaatgacttgccccttgttggcggcaaggcagtgcaaatatgggtggactatgatggagaggccacacagatgaatgtgaccatagctcctctcaagctaaccaaacctttgagaccaacgctgtcagcaatcctcaacatctcaacaattttagatgaaggtgtatcatatattggcttctcttccggtgctaataatgtcggtgcattgaattatgttcttggctggagctttggaatgaacagtcctgctccgacaatagatatcatcaagttaccaaagttacctcgatttggcccaaaagtccggtctaaaactttgaagatagtcctaccgatagtcatcaccacagtcatcctacttgtgggagcagcagtcacagcattagtgtggaggcgaaagaggtatgctgaactatatgaagattgggaggttgaatttgggccatatcgcttctcgtacaaatatttatttgatgcaactgaaggatttaacaatgagaaaattctaggtgttggaggatttgggaaggtgtataaaggtgtgcttccagactctaaattggaggttgctatcaagagggtgtctcatgaatcgaagcaaggaataaaggagtttatcgctgaaattgttagtatcggccgcatccgacaccgcaatcttgttcaattacttggctattgcagaagaaaagatgaactcttattggtctatgactatatgccaaatggaagcctagacaagtatttacactgtaaagagggcaagtacacgctagattgggccaaaagatttcaaatcattagaggtgttgcatctggattattctatctccatgagaagtgggagaaagttgtcatccaccgagatatcaaagcaagcaatgtgcttcttgatgctgaaatgaacggtcatctaggagactttggccttgcaagactatatgagcatggcaatgacccacaaacaacacatgtggctggtacctttggatatatagcaccagagatggcgcgcaccggtaaggcatcccctctaacagacgtatatgcatttgccatttttgttcttgaggtaacatgtgggcgaagacctattaacaattacacgcatgatagcccgacaatattagttgattgggttgttgagcattggcaaaaaggatcactgacaagcacactggacgtcagattacaaggagaccacaatgcagatgaggtcaatcttgttttaaagctagggctgttgtgtgcaaatccaatttgtaccagaaggcccgaatacccaatgggtgccagttag</cdnaseq>

Protein Sequence

<aaseq>MEHLACFLLFLTSFTTVSIGQDQFIYNGFSGSNLILDGTAMVTP NGILELTNGASTYETSYALYPTPWQFLKVPLQSFSVNFVLFMAPSIRCPDSMAFMIFP SKGLKNDQRESNLAVNFLSCQDKRFLENNENDISISINSSFSRPLETHPAGFYDDKNG IFNDLPLVGGKAVQIWVDYDGEATQMNVTIAPLKLTKPLRPTLSAILNISTILDEGVS YIGFSSGANNVGALNYVLGWSFGMNSPAPTIDIIKLPKLPRFGPKVRSKTLKIVLPIV ITTVILLVGAAVTALVWRRKRYAELYEDWEVEFGPYRFSYKYLFDATEGFNNEKILGV GGFGKVYKGVLPDSKLEVAIKRVSHESKQGIKEFIAEIVSIGRIRHRNLVQLLGYCRR KDELLLVYDYMPNGSLDKYLHCKEGKYTLDWAKRFQIIRGVASGLFYLHEKWEKVVIH RDIKASNVLLDAEMNGHLGDFGLARLYEHGNDPQTTHVAGTFGYIAPEMARTGKASPL TDVYAFAIFVLEVTCGRRPINNYTHDSPTILVDWVVEHWQKGSLTSTLDVRLQGDHNA DEVNLVLKLGLLCANPICTRRPEYPMGAS</aaseq>

Gene Sequence

<dnaseqindica>4106..4128#1..1765#atggagcatttagcctgcttcctcctcttcctaacatccttcaccacggtcagtattggacaggaccagttcatctacaacggcttctccggcagcaaccttatccttgatggcacagccatggtaacaccaaacggaatccttgagcttaccaatggcgcaagtacctacgaaacaagctacgccctctacccgactccatggcaatttctgaaggtaccattacagtccttctcagtcaactttgtgctcttcatggctccttctattagatgtcccgacagcatggctttcatgatatttccgagcaagggcctcaagaatgatcagagggagagcaatcttgcagttaattttttaagttgccaagacaaaaggtttctggagaacaacgagaacgacatcagcatttctatcaacagtagtttcagcagaccgctagagacccatcctgctggcttctatgatgacaagaacggcattttcaatgacttgccccttgttggcggcaaggcagtgcaaatatgggtggactatgatggagaggccacacagatgaatgtgaccatagctcctctcaagctaaccaaacctttgagaccaacgctgtcagcaatcctcaacatctcaacaattttagatgaaggtgtatcatatattggcttctcttccggtgctaataatgtcggtgcattgaattatgttcttggctggagctttggaatgaacagtcctgctccgacaatagatatcatcaagttaccaaagttacctcgatttggcccaaaagtccggtctaaaactttgaagatagtcctaccgatagtcatcaccacagtcatcctacttgtgggagcagcagtcacagcattagtgtggaggcgaaagaggtatgctgaactatatgaagattgggaggttgaatttgggccatatcgcttctcgtacaaatatttatttgatgcaactgaaggatttaacaatgagaaaattctaggtgttggaggatttgggaaggtgtataaaggtgtgcttccagactctaaattggaggttgctatcaagagggtgtctcatgaatcgaagcaaggaataaaggagtttatcgctgaaattgttagtatcggccgcatccgacaccgcaatcttgttcaattacttggctattgcagaagaaaagatgaactcttattggtctatgactatatgccaaatggaagcctagacaagtatttacactgtaaagagggcaagtacacgctagattgggccaaaagatttcaaatcattagaggtgttgcatctggattattctatctccatgagaagtgggagaaagttgtcatccaccgagatatcaaagcaagcaatgtgcttcttgatgctgaaatgaacggtcatctaggagactttggccttgcaagactatatgagcatggcaatgacccacaaacaacacatgtggctggtacctttggatatatagcaccagagatggcgcgcaccggtaaggcatcccctctaacagacgtatatgcatttgccatttttgttcttgaggtaacatgtgggcgaagacctattaacaattacacgcatgatagcccgacaatattagttgattgggttgttgagcattggcaaaaaggatcactgacaagcacactggacgtcagattacaaggagaccacaatgcagatgaggtcaatcttgttttaaagctagggctgttgtgtgcaaatccaatttgtaccagaaggcccggtatgcgtcaagtcatgcaatacctcgacaatgagatgccacttcctcggttgatgcccacaaacttgagttatagcatgttgggatatttgcaaaacgacggtttcgaccagtacaaatctgtgccatctacagtttgcagcaacaacctgacatcgagcctcacgagtggaagatgatacaaatggatgggattcccagtagtgattgtctacttgtatgaacatattgtagctttattgtaagctggtgttcccagccttgtagtaatgttgctttcttaacaaaatcaggacccagaaggtttttttcaaatttgtggatgctcactgtaaattatttattattctatgaaacggggaaggaaaagtaaatattagctaaccaaaaaacgaaatcaacatccttgttcactccatatttctgttcttgtgctgttttagttgtcttgaagtttcctttcatgcatattacttggccagttcaaccaaaattatgttaaatctgttactgtggctgaactgattttagtcgaacgtgggatggccacgtttgcatgtaatttcccctagttttgggtatgaatagaaggagaagagaatcccggaaaagctgcagcgagatcgccgaacaaactgtctttgattctctgtttttacttcagcttcgtcagagttagcctttgtcggtccgacaatgtgcagagagcgtgtgagctttagaattcaagcattttcagattgtgttccttatttatttctcacaactatcagagttgatacttgattgttgtaactgcaggcaaccactcaataaagcacaacctttggtgaaaattaaaagattatacttttccgaggaaaataatatgggatattggttagattactaccagccattagccatattataagaaccacatattagagtcctcgtcgaggcaaatacaaggcaggtattgattgcattggcaactggcaacctctgtcaagcacacataagaaatcttgcacataatttgatagataggattctccaaatgcagagtaaaacaaccacaattaactttgctttcttaaatttctataacaatttttaccttagtttcttgtctcacagtcatgtttcttgcatgctaggtagcactatttcacatataaacagttggaggtaactcatggtacttttgataaaatagtacctcgaatttatcaaaatggagggaattaatttggtttataatggaaaataaatctgtatatgatttgatagtatgattaataaaaacctaattcaacaaattcagttatttagtgtgtcttagtgcttgtgccaaagatctcaattaaatctctccctatgaccatcccaatctcgatccaaaaattaccatcgaaatgaaaatcactagtttcgaattataaaatcggtgtatccctcctaagttgctcacagaattcctttgaaattctaattcaaaatctagtttaaaatcccaaaatttttccctaaactcagtttttaaattttcaaatcaaattcaaaattgcctttgaaatttcttttcctaccaaaattgtttttctccaaaaatcaaaattcctgaattttctaaaatctgaatatcgtcaaaaactttaagacattctttctggaatttacccttagttcctggaattcaaagttaaaatttgaattcctaattcaaatcctagcctgatatcaatattattaaggagggtgagcatatgtcttggagagtcgaacacgcactgcaagcgaggacgctgaccacacaggagaacaccatgaactgatgaaggagcaaagaggtgatcaatccaggggcatggtatcgtaggggttgctccatatatatcgtgctcatgaggttttggatttcgggagagatgccaggtgctatagtacttgagcaggtccggccggccgtcatcatggaaggatatactgtagtctgttttgccttgttcggtgcttgtttatccactttcttttcttttcttttctttttttgctgagttgtgcatgctttggttgttttgttgttatgtgaatgattgtgtgggtgaggcatcactgtctcagcctcttggtgtgttgctctccttgcacctccaccctctggtctcctctccttccaactgtttagagttattttttttctctttataataattttgtatctcgtcacaaatagagctttcatgaatgctatatctaggccttcatgcaaatagttagcatatttagaatgctgcatatattcatttagttcgttctatgacaactcaaagtcaaattaatatatcactactgcagaatacccaatgggtgccagttag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0131400, RefSeq:Os07g0131400