Os07g0134000

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Revision as of 08:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0134000| Description = Similar to Amino acid permease-like protein (Fragment)| Version = NM_001065374.1 GI:115470480 GeneID:4342343| Length...")
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Gene Name

Os07g0134000

Description

Similar to Amino acid permease-like protein (Fragment)

Version

NM_001065374.1 GI:115470480 GeneID:4342343

Length

5689 bp

Definition

Oryza sativa Japonica Group Os07g0134000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1821028..1826716

Sequence Coding Region

1821340..1821996,1823619..1823761,1824239..1824453,1825956..1826049,1826152..1826385
,1826504..1826624

Expression

GEO Profiles:Os07g0134000

Genome Context

<gbrowseImage1> name=NC_008400:1821028..1826716 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:1821028..1826716 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatggagaggccgcaagagaaggtggccaccaccaccaccgccgccttcaacctcgccgagtccggctacgccgaccgccccgacctcgacgacgacggccgcgagaagcgcacagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgggtgatcgggccggccgtgctggtggcgttctcggtcataacctggttctgctccagcctcctcgccgactgctaccgatctcccgaccccgtccatggcaagcgcaactacacctacggccaagccgtcagggccaacctaggtgtggccaagtacaggctctgctcggtggcacagtacgtcaatctcgtcggcgtcaccattggctacaccatcactacggccatcagcatgggtgcgatcaaacggtccaactggttccatcgcaacggccacgacgcagcctgcttggcatctgacacgaccaacatgatcatatttgctggcatccaaatcctcctctcgcagctgccgaattttcacaaaatttggtggctctccattgtcgctgctgtcatgtcactggcctactcaaccattggccttggcctctccattgcaaaaattgcaggtggggcccaccccgaggcaaccctcacaggggtgactgttggagtggatgtgtctgcaagtgagaaaatctggagaacttttcagtcacttggtgacattgcctttgcatactcctactccaatgtcctcatagaaattcaggacacgctgcggtcgagcccggcggagaacgaggtgatgaagaaggcgtcgttcatcggagtctcgacgacgacgacgttctacatgctgtgcggcgtgctcggctacgcggcgttcggcaaccgcgcgccggggaacttcctcaccggcttcggcttctacgagcccttctggctcgtcgacgtcggcaacgtctgcatcgtcgtccacctcgtcggcgcctaccaggtcttctgccagcccatctaccagttcgccgaggcctgggcgcgctcgcggtggccggacagcgccttcgtcaacggcgagcgcgtgctccggctgccgctcggcgccggcgacttccccgtcagcgcgctccgcctcgtctggcgcacggcctacgtcgtgctcaccgccgtcgccgccatggcgttccccttcttcaacgacttcctcggcctcatcggcgccgtctccttctggccgctcaccgtctacttccccgtccagatgtacatgtctcaggccaaggtccggcgattctcgccgacgtggacgtggatgaacgtgctcagcctcgcctgcctcgtcgtctccctcctcgccgccgccggctccatccagggcctcatcaaatccgtcgcacattacaagccattcagcgtctcctcatga</cdnaseq>

Protein Sequence

<aaseq>MGMERPQEKVATTTTAAFNLAESGYADRPDLDDDGREKRTGTLV TASAHIITAVIGSGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSLLADCYRSPDPV HGKRNYTYGQAVRANLGVAKYRLCSVAQYVNLVGVTIGYTITTAISMGAIKRSNWFHR NGHDAACLASDTTNMIIFAGIQILLSQLPNFHKIWWLSIVAAVMSLAYSTIGLGLSIA KIAGGAHPEATLTGVTVGVDVSASEKIWRTFQSLGDIAFAYSYSNVLIEIQDTLRSSP AENEVMKKASFIGVSTTTTFYMLCGVLGYAAFGNRAPGNFLTGFGFYEPFWLVDVGNV CIVVHLVGAYQVFCQPIYQFAEAWARSRWPDSAFVNGERVLRLPLGAGDFPVSALRLV WRTAYVVLTAVAAMAFPFFNDFLGLIGAVSFWPLTVYFPVQMYMSQAKVRRFSPTWTW MNVLSLACLVVSLLAAAGSIQGLIKSVAHYKPFSVSS</aaseq>

Gene Sequence

<dnaseqindica>4721..5377#2956..3098#2264..2478#668..761#332..565#93..213#atcgccattaacccattaccacctccacctcgcgcactcagtctgtactacctgtacgtacgtggccgccgctagctaagctaggaattgaaatggggatggagaggccgcaagagaaggtggccaccaccaccaccgccgccttcaacctcgccgagtccggctacgccgaccgccccgacctcgacgacgacggccgcgagaagcgcacaggtgggtgtatgtccggtgtccatggatgaggtagctagagctaagctaattaagcaagctaatgggttggtaataacaatggcggcggccggacgaacacttggatgcatatatgcagggacgctggtgacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatagcgcagctggggtgggtgatcgggccggccgtgctggtggcgttctcggtcataacctggttctgctccagcctcctcgccgactgctaccgatctcccgaccccgtccatggcaagcgcaactacacctacggccaagccgtcagggccaacctaggtaaatttaattaatcactacaattactgctaattaatactgtaataattactgtacttagcttgttactaatatggagatggagatattttgtgggtgcaggtgtggccaagtacaggctctgctcggtggcacagtacgtcaatctcgtcggcgtcaccattggctacaccatcactacggccatcagcatggggtacctactgtctactatgactaattactctagtaaatttgggcagtaagcttttagctatgaatcagtataacttatgtactcttgattgtggtttagactgtgtacaccttctgaggtgtagaggccgggttaatataatccattatctaaaaagtataagtagcagagtctgtttaaatttatatgcgttattgttattgtattttaggatggagagagctagcacgtacatagtagagtgtggagtaagcttaatccttgattaggacacttcactaacccattcttcacgttactgctactgagagctgtagactgtagagtgagtagcagtagatgagaaaattcagtcaatttaattagccgtgcaagcatgcatgatgatgcatgtgtacaagtacatgtcctccatcatatatctctgcatgcagcctgcccctctgttaatttgtttgtttgtaactatatatctaggtggtaggataatgttttgcatgtcccaaattccgtttagctttcgtcagcttcttaatttagtttctggagcgcaaatatatatctcatttccataattccacgtgcctttacttacaggcggcacgcccgcggcccgaccacctcaaaaagaaaaaaaaaatactccctccgtattttaatgtataacgtcgttgacttttcgaccaacgtttgatcattcattttattcaaaagttttgtgtaaatatgaaaatatttatgtcatgcttaaagaacatttgatgattcatcaagtcacaataaaataaataataattacataaattttttgaataagatgaatggtcaaacgttggacaaaaagtcaacggcgtcatacattaggaggtagtatatgttttggccatttgcaaaaattgttgtcatagtgaatgcgtcgccatgtttaattaggtttgacagtatgattaggacaacataggtaagaggctactcataattctcaaaagcaaagcaaattgtaattaaagcattcattcattctctgaaatgtcgcatggctgctatgacagtcaaattaattaggttgagtacgttaggtggtcttcttgaggatccaacaaaggcaaaaaaaagcagagtatatagtgggagagaaaaagttggggaagataacattactggacagttcaaaagtagttggaaaatattcagattctagtgagtatccaaaactttttccactgaaaaagaaacagcgagctaaaaaggagtggttcttgctctgctctgcatattggcatggctatggagaagaatcttattcgtgataagcatctactagactactaccactaatgattgataaacaaaaaaatcagacacttttaccttgattcctacctttcatttcattttcagtacactcctttttctttctgatatgattttcgtcagtgttactctgaatttctctgaatactaacatatggttaatttacaaatctgttgatgatatgcagtgcgatcaaacggtccaactggttccatcgcaacggccacgacgcagcctgcttggcatctgacacgaccaacatgatcatatttgctggcatccaaatcctcctctcgcagctgccgaattttcacaaaatttggtggctctccattgtcgctgctgtcatgtcactggcctactcaaccattggccttggcctctccattgcaaaaattgcaggtaaatatataccatctgatatatatggatgacaaaaacaaatttgtgtggctatcttattcttaggattgcaagaaatatttttttctggttctcgccgcacatagaactgaaactggttcctgtgaaaatccgacaaaattcttgtaaaaccgctactttccaaaggagagacccaagtcctcctcggtccaaaaatggagaccaagtctttaatttacttcatctattctgttcccgtgtacacatcatgcaattaattcacaagggaaatggacaaaacaaagaagatatgatgctgatattataaatatacatttttggtagggcagaaacaaaattgaggcgtgcaaaaatgtatatacatagcctgggacacttgacatgttggtttttgtttgtatcatccatgttgggggggggggggggccatgatgcagtgcatttgtatgattgaattcatgtggttctctgcaggtggggcccaccccgaggcaaccctcacaggggtgactgttggagtggatgtgtctgcaagtgagaaaatctggagaacttttcagtcacttggtgacattgcctttgcatactcctactccaatgtcctcatagaaattcaggtaaattaattttaattaacctttgcttatatttctcttgatacaaacatgagcgataagctatctttttcagtgaaacaaatttagacaagtataaaatgagaaaagtaaattgatgtagtactctctccgtctaaaagaaaaaaattaaactctaaggatgaatctatgtgtccaaatttatccctaatatttaattctttttaggagggaggaaatagtacattaggaaaagtgagagaaaaaaataggaggaaaattttggggatgttccgtatgcccgtgatcttttgagctctgtcaaagaggacagatttctgaaagatagcagtatgggtgaaccctacaagaggacagattttgcagtttcctgcacatgaaaaatactctgaaaaatacagatatattccttttcagaatcttggtcatactggtcaacatagagtctctgttcttcattgaaaccactggttttgccatgaaatttgcaagtagatagcgatatatcccttattatacttaacctgtcggccatcaaatttcagatcatgaatcggcagtcagaaattcagagttcacatgcaagaacatttctgaaaatgactacctaatctaattactaataccatttctgaaaatgactgcctaacctaattactaagagcaagtttaatggtatagcatagtactagctccaaattttctatagccaatggaatagccaattcatacaataattacttgctatactagtaatacctggtcccacctgtcacacacattacgtcttggagtccgtgctgcagctggctacagatctgtagcccgctgcttttctctctcttcttttatctctttaaaatatgtttatagctagcttatagcctgttattgtacctgctctaatactatatgagcttcaaatcttgaaatgtctttgtcctcaatcaaaatactgtcctttcctttggcgttttgatggatgacaaaaatgagacaagtctcgaggcaatacatttcactgcatttattgcacatttacgtctcacgcaaatctcaacgcaactctagtggtacttctcctagctaggtcaatattgcaatcaaacacaaatttttacactaatttgtatgaagtagtgagaaaataatttgatgcgttttgagagcatctcatgattgggtaattttatcatccgataccgataggtgagttaccgataggtgagtatcttcaagtaatatgcatgtatctagagatattaaaatatactattattttataaaatttagatatctcgagttaatgtactgtaattttttttctatccttaaaaatatcgggaagtataaaacttggtatcttctgatactatgtattctgatataccaaaatttttagtctaaatctcgaactaccttttcatttcaagaaccgtaaaatctttcctatcctttttcttaaaaagatatcgggaagtataaaacttaatatctcctgatactatgtattttatgtattttgagataccaaaatttttagtctaaatctcaatgtactttaatttttcaagaactgtaaaatttctcgaaatgacaaaaatgtgtgcgtaaacgtgcaggacacgctgcggtcgagcccggcggagaacgaggtgatgaagaaggcgtcgttcatcggagtctcgacgacgacgacgttctacatgctgtgcggcgtgctcggctacgcggcgttcggcaaccgcgcgccggggaacttcctcaccggcttcggcttctacgagcccttctggctcgtcgacgtcggcaacgtctgcatcgtcgtccacctcgtcggcgcctaccaggtcttctgccagcccatctaccagttcgccgaggcctgggcgcgctcgcggtggccggacagcgccttcgtcaacggcgagcgcgtgctccggctgccgctcggcgccggcgacttccccgtcagcgcgctccgcctcgtctggcgcacggcctacgtcgtgctcaccgccgtcgccgccatggcgttccccttcttcaacgacttcctcggcctcatcggcgccgtctccttctggccgctcaccgtctacttccccgtccagatgtacatgtctcaggccaaggtccggcgattctcgccgacgtggacgtggatgaacgtgctcagcctcgcctgcctcgtcgtctccctcctcgccgccgccggctccatccagggcctcatcaaatccgtcgcacattacaagccattcagcgtctcctcatgatcaaattaataattatttgttaatactgatgatgatgatgatatgatccatcgatcgatgaagaacaaatatatatatatagcgagatcgatcgatcgatcaagatcgtgaatgatatatataatacatagttaatcaatcagatgttaattaagtcgtgttcgtgcgtgtctttcagagttcagatcgacaggttgatttgagatgagtgctcaagtgtttcgtcagatgtaattaactatgtaagtggtaaatttagcctgatgatgatgatgatcagtctgaatggatgtcatgtaagtggtaaatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0134000, RefSeq:Os07g0134000