Os07g0158900

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Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0158900| Description = Cyclin-like F-box domain containing protein| Version = NM_001065466.1 GI:115470664 GeneID:4342442| Length = 3420 bp|...")
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Gene Name

Os07g0158900

Description

Cyclin-like F-box domain containing protein

Version

NM_001065466.1 GI:115470664 GeneID:4342442

Length

3420 bp

Definition

Oryza sativa Japonica Group Os07g0158900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3185842..3189261

Sequence Coding Region

3186093..3186509,3187286..3187438,3187541..3188398,3188479..3188541

Expression

GEO Profiles:Os07g0158900

Genome Context

<gbrowseImage1> name=NC_008400:3185842..3189261 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3185842..3189261 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgatgctactacgaccaaaaggaaaagaccagtgattcgtttcaatgacctacctacggatatattgattggtatcatatcccggctgccgataaaagaggcggcaaggacgagtatattatcaagccactggaaaaaaatctggtgttcccatgtaaacttggaattctccttctactcgatgtcgccaagattagcttcgacctcacatgatgcacggcttaggatgaaaatgttcatcgagagagtcagtcaagtctttgcgcaacacagtggtctaagtgttcagaaaatagcaatccaaggtaagttggataatgaacatgcagaccacataaacagatggctcagctttgttagtgctactaaaacgaaagatcttacttttgatttcaaatcccggtatcctagagaggggccctatgatttcccttttaagtttttcggtgctatggacagttcatatttgctgtccatgaggcttagtgctgtttctctgaacccgcctgtggatttcaaagcctttctgaaccttaaaaggctcaagttagaacacacaaatattactgatgaaaacatgcagattttgatctccaactgcaatgccttggagtttcttggtatcgttgattgtgggaagctcacaagattgtcgacatcgcacctttggaaccagcttaaacatttgcatgtcgagagctgccatctgcttaaagagatagagttgaatcttggcctgacgaaacttgggtacaagggcacactgataccgttgtcacctcctgggccattgctgctaacgaatgtctgcatgaagctgcaacacgctcgttcctctcttggatatatcttcaccaatcttccaagcacgctgctccatctcgagacgctgagtttgcaatgttcagaactcgagagggctattttgccagaaaatcatatcaaatttatgtatctaaagcatttgaggttgcaattgagacaccctgtgacggaaaagaagattgatcttcttgactttgcctgcctactggaagctgctcctttactgcaaaagtttgaattacatatgtggatgccccttcaccatcaacggtatcgcgaagaagctcatggcgagctacggagtcttccaccgcagcctcatgcccatctcaggcttgtacacataagtggattcatcggcatgaaagaccaattggagctgtcactgcacattctcagaaattccgccatgatcagggcgatgaaggtcgaccccaagccgctcttcgcccttccttgtatatcgatgctgtcacccttggaagggtttcagtatcttgatgggtatgaggtcgccattgaatatctctgcagagaagaccacaacaatgttgtcgatgtttctgaaattcgtcgcgaggaggtcgaaacgctctcggtttgtgagctggtttatccagattgtgttcgccttacccgtaaggccaattcctcttcctga</cdnaseq>

Protein Sequence

<aaseq>MDDATTTKRKRPVIRFNDLPTDILIGIISRLPIKEAARTSILSS HWKKIWCSHVNLEFSFYSMSPRLASTSHDARLRMKMFIERVSQVFAQHSGLSVQKIAI QGKLDNEHADHINRWLSFVSATKTKDLTFDFKSRYPREGPYDFPFKFFGAMDSSYLLS MRLSAVSLNPPVDFKAFLNLKRLKLEHTNITDENMQILISNCNALEFLGIVDCGKLTR LSTSHLWNQLKHLHVESCHLLKEIELNLGLTKLGYKGTLIPLSPPGPLLLTNVCMKLQ HARSSLGYIFTNLPSTLLHLETLSLQCSELERAILPENHIKFMYLKHLRLQLRHPVTE KKIDLLDFACLLEAAPLLQKFELHMWMPLHHQRYREEAHGELRSLPPQPHAHLRLVHI SGFIGMKDQLELSLHILRNSAMIRAMKVDPKPLFALPCISMLSPLEGFQYLDGYEVAI EYLCREDHNNVVDVSEIRREEVETLSVCELVYPDCVRLTRKANSSS</aaseq>

Gene Sequence

<dnaseqindica>2753..3169#1824..1976#864..1721#721..783#tcacttctccacggtttcaccctccctctctgagaggggggggggggggggggaatcattgagtgatgactgccctatccctgagcagacgagccccaggcggcgggccggcgacctagccccacgccacgccggatccggctgtccgttgccggcggcgctatgcctgcctcttgctgaaagttgactatcggttcagtgttcgtttcggattagagttggaggtcaagtcggtgctcatcatcttctaatatatatatatatatatatatatatacaaatcatcatcttcttcttcatccaaacggctgcgccgccgcttccgtgctctgcatcttcctctgccgcgggtacgaatcctgccgatcgaccaaatctcaggtattcacccccccccccctcccaaccccttcaaaatttcttcttttgcccgtacagggaatttgcatcttccagagacagtacccgatcgatctagaacagggcaatcaatcgatccctgcatcagatgcgctttctttttcttgcttacatccgactgttatttggtttccggcgaacaagcctcatagtagttcctaagattcaagccattaattttgttactagctaggtcaacgtgttggtgttgctgctgtgggcagcagtttggtggctacgagaaagacaaaacgaagcttgaaacggattggaactaatacaaccaaaaaagaagaagacatggatgatgctactacgaccaaaaggaaaagaccagtgattcgtttcaatgacctacctacggtatgatcaattgataattcattcatcaacaacatgctgatttgtttgtacagttgacaccattgttctcctcgttgcaggatatattgattggtatcatatcccggctgccgataaaagaggcggcaaggacgagtatattatcaagccactggaaaaaaatctggtgttcccatgtaaacttggaattctccttctactcgatgtcgccaagattagcttcgacctcacatgatgcacggcttaggatgaaaatgttcatcgagagagtcagtcaagtctttgcgcaacacagtggtctaagtgttcagaaaatagcaatccaaggtaagttggataatgaacatgcagaccacataaacagatggctcagctttgttagtgctactaaaacgaaagatcttacttttgatttcaaatcccggtatcctagagaggggccctatgatttcccttttaagtttttcggtgctatggacagttcatatttgctgtccatgaggcttagtgctgtttctctgaacccgcctgtggatttcaaagcctttctgaaccttaaaaggctcaagttagaacacacaaatattactgatgaaaacatgcagattttgatctccaactgcaatgccttggagtttcttggtatcgttgattgtgggaagctcacaagattgtcgacatcgcacctttggaaccagcttaaacatttgcatgtcgagagctgccatctgcttaaagagatagagttgaatcttggcctgacgaaacttgggtacaagggcacactgataccgttgtcacctcctgggccattgctgctaacgaatgtctgcatgaagctgcaacacgctcgttcctctcttggatatatcttcaccaatcttccaagcacgctgctccatctcgagacgctgagtttgcaatgttcagaactcgaggtttggtcatgaactcagttcttctgcattcaaatattcttgctcatcattccctatgtgagattgattgtgttatgtctcttctcttcttgtgcgtatcagagggctattttgccagaaaatcatatcaaatttatgtatctaaagcatttgaggttgcaattgagacaccctgtgacggaaaagaagattgatcttcttgactttgcctgcctactggaagctgctcctttactgcaaaagtttgaattacatgtaagtctgtcttttggagatttggattacgcaattcacttatgtaaaccgatcaatcttcttcaaactgaatactgtcttagtggcttttacatgagatttttttcgttatgtgggtacagatggtcactcactttatattgtttattgaacactattttctgtttctagcagaactgcttttatattatgttagattatatctgcttggacatttcctttacttgcttgactctgacttcagtttcaactgaaacacaaccacacaacctaatcctgttttggactaaagtccatactatgaacattcttctgagcaacaaaataatatagttctgatagagcttttaactctcttattatgcaacacttttttacttttgtatagatctagagtggcatgcatgtaacttgcaattacagtgagaaatgagctaatcgttaatattctagctagtctgaaaaaaagccccatcctatatatacaattaaaccaccaaatcagtagtgctggcctgagttaaatggcctgccttgcctatatgctttctgttctctatattcatgtagatatacctataataacaccaccatgtttcccacaatgctgatatttatcattttttatgctgatatttatcatttttctaaaaagacgcgaatattagggaatgacctaaaatcaaataattagaaggggtgagacttacgcccacaaccttgtggagctatccggaagacccctggacgtttctcatttatcattttttttctagatgtggatgccccttcaccatcaacggtatcgcgaagaagctcatggcgagctacggagtcttccaccgcagcctcatgcccatctcaggcttgtacacataagtggattcatcggcatgaaagaccaattggagctgtcactgcacattctcagaaattccgccatgatcagggcgatgaaggtcgaccccaagccgctcttcgcccttccttgtatatcgatgctgtcacccttggaagggtttcagtatcttgatgggtatgaggtcgccattgaatatctctgcagagaagaccacaacaatgttgtcgatgtttctgaaattcgtcgcgaggaggtcgaaacgctctcggtttgtgagctggtttatccagattgtgttcgccttacccgtaaggccaattcctcttcctgattaagatttgagccactctgaaggtattgttcatgccagtcaagctctacacaatttggacgactttggagtttggagcagctaagtcagccctgattagtttggttttggtttttggacaacttaggattgtgaatttgaagaacaactcgtatgtgttttagttccttgacggtaacttatttaacttccttttctgtatgatggttgcttcagaaaatttcatcactggaaagtgtttttgtgattgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0158900, RefSeq:Os07g0158900