Os07g0162300

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Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0162300| Description = Similar to RIO kinase| Version = NM_001065481.1 GI:115470694 GeneID:4342459| Length = 5078 bp| Definition = Oryza s...")
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Gene Name

Os07g0162300

Description

Similar to RIO kinase

Version

NM_001065481.1 GI:115470694 GeneID:4342459

Length

5078 bp

Definition

Oryza sativa Japonica Group Os07g0162300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3357011..3362088

Sequence Coding Region

3357199..3357250,3357319..3357425,3357841..3357969,3358661..3358753,3358935..3359014
,3359180..3359293,3359530..3359603,3359757..3359833,3360558..3360641
,3360732..3360824,3360901..3361008,3361130..3361204,3361507..3361911

Expression

GEO Profiles:Os07g0162300

Genome Context

<gbrowseImage1> name=NC_008400:3357011..3362088 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3357011..3362088 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagaggagtggtcggactccgacgtggccgatgcgctcgactggctcgacggcgcggaggccgaacgcgcacggcggggtgctgtcccgcccgttccagccgatctccaaccgcacgcagaagctcgcctcgcacatccgcgccacacccctggaggaatgggaaggtagaatgaacgtggggatgtcaaattcagtgacgactgcgataagggacagcataagggagacggcaattgggaaaacaaggaacacagagaaggctgatcgtgctacagtagaacaggctattgatccaagaacacgcatggttctgttcaagatgttaaaccggggggtttttaataccataaatgggtgcatttctacagggaaagaggcaaatgtctatcatgcatcaaaggctgatggccaggagttagcgatcaaagtctataaaacatctgtccttgtttttaaggatagagaccgatatgtccatggagattaccgctttagacatggttactgcaagcataatcctcggaaaatggtgaagacctgggctgaaaaggaaatgagaaatcttttacgagttggagcagctggaatccgatgcccaaaaccattgctcctgaggcttcatgtactggtgatggaatttataggaaaaggaggttgggctgctcctcgtctcaaggatgctgctttatctgatgataagttgcgtgaaagttattttgagttaattacgacaatgcggacactctaccaaaaatgcaaactggtccatggtgatctgagtgaatacaacattctttatttcgagggacacttgtatatcattgatgtttcgcagtccgttgaccttgatcatccttcagcgttggaattcttgaaggaagattgcttgcatgttactgacttctttaaaaaacgtggtgttgctgtcatgtcagtaacagaactatttaattttgtgattgatcaaaatattgctgatgaagatgttgatcattacctggaaaagattcagcaaaagatgttggaaaatggagatatggttgcaaacgacgatgaaatcaccccaacagtcttggttcagacgctggattatgtgaagcaatgcgaagcagatattgtcaacatgtcattgatgcaacgcccatccttcgcgaatgaaccaacagcggataagctttacaaccaaccattgctaggatttgtgcggaataaaaacgagcctaccaaaaaccagcaagtacaatcagaagaacctttggatctgcaaaataagtgctcctcggaacatagtgaatcttgcactagttccgatgaagacggttcatggcatgagattttgaaggtgggacctgaggaaaggaaggctgctcggaaggaaaacaagaagaaagtaaaagcagaaaagagagaagctcgcaaagataagatcccaaaggctgagaagaagaagaggaagaaaatggcaaaagccaagtgcaagcggtag</cdnaseq>

Protein Sequence

<aaseq>MKRSGRTPTWPMRSTGSTARRPNAHGGVLSRPFQPISNRTQKLA SHIRATPLEEWEGRMNVGMSNSVTTAIRDSIRETAIGKTRNTEKADRATVEQAIDPRT RMVLFKMLNRGVFNTINGCISTGKEANVYHASKADGQELAIKVYKTSVLVFKDRDRYV HGDYRFRHGYCKHNPRKMVKTWAEKEMRNLLRVGAAGIRCPKPLLLRLHVLVMEFIGK GGWAAPRLKDAALSDDKLRESYFELITTMRTLYQKCKLVHGDLSEYNILYFEGHLYII DVSQSVDLDHPSALEFLKEDCLHVTDFFKKRGVAVMSVTELFNFVIDQNIADEDVDHY LEKIQQKMLENGDMVANDDEITPTVLVQTLDYVKQCEADIVNMSLMQRPSFANEPTAD KLYNQPLLGFVRNKNEPTKNQQVQSEEPLDLQNKCSSEHSESCTSSDEDGSWHEILKV GPEERKAARKENKKKVKAEKREARKDKIPKAEKKKRKKMAKAKCKR</aaseq>

Gene Sequence

<dnaseqindica>189..240#309..415#831..959#1651..1743#1925..2004#2170..2283#2520..2593#2747..2823#3548..3631#3722..3814#3891..3998#4120..4194#4497..4901#cgtgttgccacgaccgttccagggttttgcttcaaccatggcgaccgccgccgccgccgccgccgtgtaccttcccgaggtggatagccgcttcgccgacgccgacgaggaggaggaggaggaagcgacggtgaggccagtcgaggtggccgagagtaaggatcaggaggaggtggaggaggaggaggatgaagaggagtggtcggactccgacgtggccgatgcgctcgactggctcgacgccgcggagggccccgacggctccggccggccagcggccgccttcacggcggcaggaggcgccgccgcggcgcggaggccgaacgcgcacggcggggtgctgtcccgcccgttccagccgatctccaaccgcacgcagaagctcgcctcgcacatccgcgccacacccctggaggtatgcagcttccaactcctctctctctcgcctcgtagtagtcggtgcctcgtgctttgtgttggttgcacactccaatttttcactgggcctgcttatgtgatgatcccatgtttgcgtaatttcactttgcaagcgattagtgtatgcaattacgttataaattttggagtatattgttttgttttggaatttagacaatccattcatcctagaaccccgtattgttcaacttgatttcatgtaactttgcagtaaaaaaaaaactgcggtgcttagccctgtagcaaatcggagtgcttacctgtgtgcgtgtgcgcgttgtgcgagtgtgaggaatgcttgttcacctgtgtgttgtggtactttgtgaagttgtgctgaaatgcaatgtggtgaattttgaattgtccaggaatgggaaggtagaatgaacgtggggatgtcaaattcagtgacgactgcgataagggacagcataagggagacggcaattgggaaaacaaggaacacagagaaggctgatcgtgctacagtagaacaggtatacacattttcttagtaggttgtatccatttcactcttgtgcttcttaaatttactatgtgctgcctgcacttctgcccccttttgtgtttaatagcaaactaaaaaagcatccatctctgttcatccgagtttgctcttattatgtgtacaccaactccgtgtgttatatattatataatgccttgtttagctgtaccgcatggacaataatttggactgtatcattcaagaaaatcgctctagtgcaattgactgctttggtaggaagttcctaagatgtattttttttatggcctgttgtgttcacaaggttggtaggcagtagtttttaatataagcttgaacaacactgacttaatgcctagtgcatttgctataatgttgttaactagcatattatctcatattttcatttctcctttatatgtcatccattaatacttataatctttgtgtgcttgatatccataagaatgctctcttagccatgtgattttcttatttttgaggttatgattcaatgaaattttcagtggttatagctgcagcatctatctcttgtatcctatctagagaaagttatgatcttctagaaaagtgataacatgttttgacttatatgattgatgatatttttgtgaaatgatttttgacaactagacgggattttgtttgttcacatgcaggctattgatccaagaacacgcatggttctgttcaagatgttaaaccggggggtttttaataccataaatgggtgcatttctacagggaaagaggtatttttttagttcaactgcatatcttattgacattgctttctgctatttgcaatttactttcgtatgtggataagaaagcatgttgagaatatatacatagtatagagcactttagctgtatacaaaagatacagaatctggcctggactgcaagtgcaattttcttttctctatgcaggcaaatgtctatcatgcatcaaaggctgatggccaggagttagcgatcaaagtctataaaacatctgtccttgtttttaagtaaggcatagatctatctacgtattcttttgtaacagggtactttttgacagctactgcagatatgttgattatggatatgttctgtgttttctagttttactaaaacaacttgttctaaaaataacttgcatgtgaacaaactacattattctcttcttgcagggatagagaccgatatgtccatggagattaccgctttagacatggttactgcaagcataatcctcggaaaatggtgaagacctgggctgaaaaggaaatgagaaatcttttacggtgagattcttctcatttttgcatcattcatgctttactcagtaaattttcttctttcaacgggattcttctgttgcctgaattattttttgtgttataaagggatgcaattagagacaaacttatttctgttttggtttagccaaatgttttcaattgttcaacaggaacaatcctatgcaaatacaatagttgattatttgaatttcatatgcttattgttaccattgtttcagagttggagcagctggaatccgatgcccaaaaccattgctcctgaggcttcatgtactggtgatggaatttataggtaaaacttgtgttttaacatttgtcaattggatgcttgtcaacttctctatctataaaaagggtaaaatttggatgcttgttaacatttgtcaattctatggaattatcaataattcagtacatcttgtaattcgatttggttttccttcaggaaaaggaggttgggctgctcctcgtctcaaggatgctgctttatctgatgataagttgcgtgaaagttattttgaggtacatgacgtatcttgtgaagataaagataatattgtagttcatattaattgtaaatctgtaatagatccatctgctctatattacattgcttcttacccaggatagaaaacttgctgtatccatgtacaacacgcagtggctgtcatcaattgtgtctgatgacgcattgacattgaattcttcacatcctatcataatgtcatgtagaaaggattgtttgtatctatttacagataataaatacgcactaatgtgaatgcaatgtgacagctgaagacaaggccgtattttcctcagttcctagaaatctggaaaggtttaagtgggtagtagggccgtggatctaggagagtctctattagcaacatgttcagcattgttttttgggtttgaacctaattaaatgcccacttcattttgatgtgctatcatgcaaaatgtgtggtgataatgttcatgcatgaaaactcttttgcatagtttttcccctgatatccaagcagtagcatatatccttcatttgctcatgcccatggacactattgtatctttactgtcaagtattcagaaaagttcggcagattaaggtgttgcctctagaacaatgggagcataagtactcctgcaatatgcacttattgttttttcgtaagggaactgtttagtgtattttttatgtgtataacaccttcagttttcccatatgcaacttctttttcagttaattacgacaatgcggacactctaccaaaaatgcaaactggtccatggtgatctgagtgaatacaacattctttatttcgaggtagttgaactctgtttattatattttttaacatcattttttttttcagatcaatggctctgattcccaccatttattctccttgtgcagggacacttgtatatcattgatgtttcgcagtccgttgaccttgatcatccttcagcgttggaattcttgaaggaagattgcttgcatgttactgtgagtagaagttgaattgacactgcatagacattcgtaggttgtgatattcaaatgtgtgtgatgctatttgcaggacttctttaaaaaacgtggtgttgctgtcatgtcagtaacagaactatttaattttgtgattgatcaaaatattgctgatgaagatgttgatcattacctggaaaaggtattttctcaatgtcacctttcagtctttctatagccactgagttctagatgtgccctgatcatgttgctttatgatgggcagaatgtctgatggattaacaattttgttgtgatgttagattcagcaaaagatgttggaaaatggagatatggttgcaaacgacgatgaaatcaccccaacagtcttggttcaggtaagataatgaataagttaatatcattgtttgcacagtttgccaaaaaatctctatttactaaacattatgttactcatcaatcatggataattcaatatttaactctacatttattttgttggttctacatgcttttgctctacagtatatataggccgtgatctttgctagatctatgacttacactattttgtaattacgttgtgttcattttgtttcgtttgtaatgtttgtgctgcatgctgtatgatggcgtatgtttgaattactgatgcttgattgttaattctatttcatagacgctggattatgtgaagcaatgcgaagcagatattgtcaacatgtcattgatgcaacgcccatccttcgcgaatgaaccaacagcggataagctttacaaccaaccattgctaggatttgtgcggaataaaaacgagcctaccaaaaaccagcaagtacaatcagaagaacctttggatctgcaaaataagtgctcctcggaacatagtgaatcttgcactagttccgatgaagacggttcatggcatgagattttgaaggtgggacctgaggaaaggaaggctgctcggaaggaaaacaagaagaaagtaaaagcagaaaagagagaagctcgcaaagataagatcccaaaggctgagaagaagaagaggaagaaaatggcaaaagccaagtgcaagcggtagtcaatctgtgtgtcgcaccaacaatggtcaatatcatcaaagctaaattagctataaaaatctactaaagttatcatatacttttcagtagattacaaatgtgagatggcctttatgaatgtaatgcaattggaagatgatttttaaattgagtataatcccttgcagcatggaact</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0162300, RefSeq:Os07g0162300