Os07g0165000

From RiceWiki
Revision as of 08:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0165000| Description = Similar to Prolyl-tRNA synthetase| Version = NM_001065500.1 GI:115470732 GeneID:4342480| Length = 2780 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0165000

Description

Similar to Prolyl-tRNA synthetase

Version

NM_001065500.1 GI:115470732 GeneID:4342480

Length

2780 bp

Definition

Oryza sativa Japonica Group Os07g0165000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3515245..3518024

Sequence Coding Region

3515466..3515552,3515627..3515740,3515850..3516056,3516291..3516428,3516691..3516852
,3516939..3517138,3517471..3517554,3517644..3517785

Expression

GEO Profiles:Os07g0165000

Genome Context

<gbrowseImage1> name=NC_008400:3515245..3518024 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3515245..3518024 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtaagaccaactagtgagaccatcgtaaaccacatgttcaccaaatggatacagagctaccgcgatcttcctctcatgattaaccagtgggctaatgtcacaagatgggaaatgaggactaagccattcatcagaactcttgaatttctatggcaagaaggtcatacagctcatgccacccttgaagaggcagaaaaggaggcaatgcaaatgattgatgtatatacaaaatttgcatacgagcaagctgcaatccctgttattccgggtcgaaaatcaagagtggaaacgtttgctggtgctaatcggacctacactatagaagctatgatgggtgacaggaaggctttacaggctggaaccagccacaaccttggacagaacttctcccgtgcctttggaacacagtttatggatgaaaatagccaaatcgaacatgtttggcagacttcttgggctattagcactcggtttgttggtgggatcatcatgacccatggtgatgatgctggcttaatgcttccgccaaatattgcacccatccaggtggtaatagtgcctatatggaaaaagggagatgaaaagagtgctgttatggaagctgtgtcttcagttcaaaacacactcaaagaagcaggaattagagtcaaagtggatgactcggagttgcggacaccaggatggaagttcaatttttacgagatgaagggagttcctataagactagaaattggtccccgtgatgtcacaaacaaaagtgttgttatttctaggcgagatatccctggaaaacaaggaaaggagtttggagtgtctatggatccatcaatactggtggaccatataaaaggtcgtctagtggaaatccaagcatcccttctacagaaggccattgcattccgtgatagtaacatagttgatgtaagctcatatggagaactgaaggaggccattgccgagggtaaatgggcgagagggccatggtcagctagcgatgctgatgagctgaaggtgaaagaagagaccagcgccaccatcagatgcttcccgttcgagcagccagagggcgctaagaaatgcttcatgactggcaatccagccgaggaagttgcaatttttgcgaagtcgtattag</cdnaseq>

Protein Sequence

<aaseq>VRPTSETIVNHMFTKWIQSYRDLPLMINQWANVTRWEMRTKPFI RTLEFLWQEGHTAHATLEEAEKEAMQMIDVYTKFAYEQAAIPVIPGRKSRVETFAGAN RTYTIEAMMGDRKALQAGTSHNLGQNFSRAFGTQFMDENSQIEHVWQTSWAISTRFVG GIIMTHGDDAGLMLPPNIAPIQVVIVPIWKKGDEKSAVMEAVSSVQNTLKEAGIRVKV DDSELRTPGWKFNFYEMKGVPIRLEIGPRDVTNKSVVISRRDIPGKQGKEFGVSMDPS ILVDHIKGRLVEIQASLLQKAIAFRDSNIVDVSSYGELKEAIAEGKWARGPWSASDAD ELKVKEETSATIRCFPFEQPEGAKKCFMTGNPAEEVAIFAKSY</aaseq>

Gene Sequence

<dnaseqindica>222..308#383..496#606..812#1047..1184#1447..1608#1695..1894#2227..2310#2400..2541#ttagtccagagcttgcattagttaccattggaggaggaaaggaactagaggaaaagcttgtggtaatacttccctctagtattactgttatattggatatagaaccacgattccgtgatattttccatgggcaatgattataaatacaagatgattgattctgtgattggattgcctctaaagctcaaccttctgcatttccattcttgagggctttgtaggtaagaccaactagtgagaccatcgtaaaccacatgttcaccaaatggatacagagctaccgcgatcttcctctcatgattaaccaggtaactctatctgcatatttgaatcaacatgagtccaatatcatttactgtactgatttttcttgttaccctagtgggctaatgtcacaagatgggaaatgaggactaagccattcatcagaactcttgaatttctatggcaagaaggtcatacagctcatgccacccttgaagaggcagaaaaggaggtttgttgaatgctaatcattgcacaagttccttcatgcacttgataacacaaattggaaagaatggaagattctaatgtaatatcatctgctccatttttctcttcaggcaatgcaaatgattgatgtatatacaaaatttgcatacgagcaagctgcaatccctgttattccgggtcgaaaatcaagagtggaaacgtttgctggtgctaatcggacctacactatagaagctatgatgggtgacaggaaggctttacaggctggaaccagccacaaccttggacagaacttctcccgtgcctttggaacacaggttactgtttggtgtttactatcttcatgttcttgtttgttttgtgtactggaaccattttatgtaccatttttggattcctatgtcatagttgctataatcaattctgcaacaagcctgtaagacagactacttccagagacttgatttggtgtctcacctgcgttatttcttgtttgcattttctttagctacatccatgatcttgaagttcttctcttcctttgcctgcagtttatggatgaaaatagccaaatcgaacatgtttggcagacttcttgggctattagcactcggtttgttggtgggatcatcatgacccatggtgatgatgctggcttaatgcttccgccaaatattgcacccatccaggtctttttccatcgattaattatatatgtgatttcttgtacataaaaactggggcccctctgtcaaactatgtttgccctgatgccctctcctttgtattcaactatggcaatacaatatctactgttcctctggcaatagtggttaaaatgttgactaagattacatgttttttccgcaaatttgctcaattgattttctgctttcagttcccaaaaccatacatatatcagtagaatttaagaatgtctgtttagcacaggtggtaatagtgcctatatggaaaaagggagatgaaaagagtgctgttatggaagctgtgtcttcagttcaaaacacactcaaagaagcaggaattagagtcaaagtggatgactcggagttgcggacaccaggatggaagttcaatttttacgagatgaaggtatagctcatttgctctctgtttctgtttatgcaggcttctttctgaattctgacacttctaccattgtttacaactttcaacagggagttcctataagactagaaattggtccccgtgatgtcacaaacaaaagtgttgttatttctaggcgagatatccctggaaaacaaggaaaggagtttggagtgtctatggatccatcaatactggtggaccatataaaaggtcgtctagtggaaatccaagcatcccttctacagaaggccattgcattccgtgataggtactatctgtttacgctgaacgacttgtcctaaagtatagtttgttctcaattcctatttatgcatttctacatacgcataatagagaacttactcaacttgtcctaaaatactttgctaatttgtcgtgaactgctgattgttttctgaataaaaatgctcttaagtgggggccatcttttgattattttcattgcaagagctcagtagtacagtgcaactgattttttagcaccacctagcaataatcattttagcgtttgtgttcttttaattccttctctttcagacaaacttcctctgaactaaacggtgcactttttactttcagtaacatagttgatgtaagctcatatggagaactgaaggaggccattgccgagggtaaatgggcgagagggccatggtcagctaggtaggtgcagtttaaatgcgctgtttgtccaacagtgttaatgttattttatgtttttgcaaacttgattcatttgtggtatacttcagcgatgctgatgagctgaaggtgaaagaagagaccagcgccaccatcagatgcttcccgttcgagcagccagagggcgctaagaaatgcttcatgactggcaatccagccgaggaagttgcaatttttgcgaagtcgtattagttcatgctttctctaatagtctggttccaaggatcaaagcattttttttccagctatattttctccattttcccagattctctgggatcttttctgatcataaattacccattgaatgcttgtgcttctgatatttctagtgtaaattagcgatcgagtagttaaatctctgtcctgcttgtcgtattaggacaaaactcacaacacggtgcaattgtataatcaaagttctcttactg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0165000, RefSeq:Os07g0165000