Os07g0168600

From RiceWiki
Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0168600| Description = Similar to 3-glucanase| Version = NM_001065519.1 GI:115470770 GeneID:4342501| Length = 3420 bp| Definition = Oryza ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0168600

Description

Similar to 3-glucanase

Version

NM_001065519.1 GI:115470770 GeneID:4342501

Length

3420 bp

Definition

Oryza sativa Japonica Group Os07g0168600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3700989..3704408

Sequence Coding Region

3701208..3701782,3703000..3704101

Expression

GEO Profiles:Os07g0168600

Genome Context

<gbrowseImage1> name=NC_008400:3700989..3704408 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3700989..3704408 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggcgagcgagctacctgtggttagtttccagcttttctgagctgtactgttggtgtgggtgtggtcaatccgtgaaaaatccccaaaatcctgtaaagtttcatcccgaattcgttccagaaatccatccatttcttggatttgatctttgtggaatcgaatcatcaatccaatctcgttgggtcttcacggctccgattggggatttagcggaggtgtgtgttcgagtggtagcaatggcgaggttggtggtggtgattgtggcggtggccatggcggcgtggtgggcggtggcggcggtggaggggttggggataaactgggggacgcaggcgacgcacccgctgccgcccaaggcggtggtgcagctgctcaaggacaacgggatcgccaaggtgaagctgttcgacaccgacttcgccgccatgagcgcgctcgccgggagcggcgtcgaggtgatggtcgccatccccaacaaggacctcgccaccatggccagcgactacggcaacgccaaggactgggtcaagaagaacgtcaagcgcttcgacttcgacggcggcgtcaccatcaagtatgtggccgttggcaatgagcccttcttgaaagcatataatggttcgttcatcaacatcacattgccggcgctgcagaacgtccagaacgcgctgaacgacgccggcattggcgaccggatcaaggccaccgtccctctcaacgccgacgtgtacgaatccacggtgccgtccgccggccgcttccgccccgagatcgccggcctgatgacggacatcgtcaagttcctggccaagaacaacgcgcccttcaccgtcaacatctaccccttcctcagcctgtacctggacgaacacttcccgatcaacttcgccttcttcgacggcggctcaacgccggtgaacgacggcggcatcatgtacaccaacgtgttcgacgccaacttcgacacgctggttgccgcgctcaaggccgtcgggcacggcgacatgccgatcatcgtcggcgaggtcgggtggccgacggacggcgacaagaacgccagggtggacctcgcgcagcggttctacgccgggctgctcaagcggctcgccgctaacgtcggcacaccggcgcggccgaaccagtacatcgagatgtacctgttcgggctggtcgacgaggacatgaagagcgtcgcgccgggcagcttcgagcgccactggggcgtcctccggtacgacggccagcccaagttcgccatggacctcgccgggcagggccggaacacgatgctggtgccggccaagggcatcgagtacctacccaagacgtggtgcgtcatcaacaccaatgccaaggacgtgtccaagctcggcgacaacatcaacttcgcctgcacgtacgccgactgcacgccgctcggcttcggctcgtcgtgcaacggcatggacaccaatggcaacgcgtcctacgccttcaacgcctacttccaggcgcagagccagaaggaggaggcttgcaatttccagggcctcgccgtgcccaccgagaccgaccccaccaccgcgcaatgcaacttcacaatacagatcaagtcgtcggcggcggcggcggcggcggcgccggtggccgccggcgtggtcgtggcggcgctggcacagctcctgcttctgtggtag</cdnaseq>

Protein Sequence

<aaseq>WRASYLWLVSSFSELYCWCGCGQSVKNPQNPVKFHPEFVPEIHP FLGFDLCGIESSIQSRWVFTAPIGDLAEVCVRVVAMARLVVVIVAVAMAAWWAVAAVE GLGINWGTQATHPLPPKAVVQLLKDNGIAKVKLFDTDFAAMSALAGSGVEVMVAIPNK DLATMASDYGNAKDWVKKNVKRFDFDGGVTIKYVAVGNEPFLKAYNGSFINITLPALQ NVQNALNDAGIGDRIKATVPLNADVYESTVPSAGRFRPEIAGLMTDIVKFLAKNNAPF TVNIYPFLSLYLDEHFPINFAFFDGGSTPVNDGGIMYTNVFDANFDTLVAALKAVGHG DMPIIVGEVGWPTDGDKNARVDLAQRFYAGLLKRLAANVGTPARPNQYIEMYLFGLVD EDMKSVAPGSFERHWGVLRYDGQPKFAMDLAGQGRNTMLVPAKGIEYLPKTWCVINTN AKDVSKLGDNINFACTYADCTPLGFGSSCNGMDTNGNASYAFNAYFQAQSQKEEACNF QGLAVPTETDPTTAQCNFTIQIKSSAAAAAAAPVAAGVVVAALAQLLLLW</aaseq>

Gene Sequence

<dnaseqindica>220..794#2012..3113#ccataccacgatacactccactcctactcttttcttttcaagtttttgaatgctccgcttgctctcgcctcgtctcctcctcgattctcgtgtcgctgctgctgctgctgctgctgttgagcagagcaatctctcgctcgtctgcttggtgtttgctcgatattgagatcgaataggaagtagagttagagcgagtgaagtgattgctcctttcattgatggcgagcgagctacctgtggttagtttccagcttttctgagctgtactgttggtgtgggtgtggtcaatccgtgaaaaatccccaaaatcctgtaaagtttcatcccgaattcgttccagaaatccatccatttcttggatttgatctttgtggaatcgaatcatcaatccaatctcgttgggtcttcacggctccgattggggatttagcggaggtgtgtgttcgagtggtagcaatggcgaggttggtggtggtgattgtggcggtggccatggcggcgtggtgggcggtggcggcggtggaggggttggggataaactgggggacgcaggcgacgcacccgctgccgcccaaggcggtggtgcagctgctcaaggacaacgggatcgccaaggtgaagctgttcgacaccgacttcgccgccatgagcgcgctcgccgggagcggcgtcgaggtgatggtcgccatccccaacaaggacctcgccaccatggccagcgactacggcaacgccaaggactgggtcaagaagaacgtcaagcgcttcgacttcgacggcggcgtcaccatcaagtgagtcctctcctcctcgccgccgccgccatcgccatggccacctacctctatctaaccaaattatccatgatcatatttgattagatcttcaattcttgcgtcttttagcaaaattttagtttctttttcaacttgcaaaacatggaattgtggttttgggatgaggatttgtgtggatcattgatggatggatagaatcatggagggggaggcagaggacagtggaggaggttggtggcgatggcacattggcacgtttggttggtcgtgcaagccacagataatgtcgttgttgaatggcccatgtttgctgcagcatggataacgatatggtgcttgtcaatgtttgacaacgagtttaatttatacctaaacagggtatcaaccaaattaaaaattggttttgggggggaccggttctatctatggtgtggacacatgggaatattacttgttcttgttctcccattggctttgaaaagacataagagaacgggagcaattattcagcattgttatccatgcatatcctacttcctaacctgattgattggtatatgggtggttgctagtaagtgctaaccatatatgagagattttttgttatttatttctgaaagtaaatgtcgaagttgtgagttttggtaggataatgcttaggcagtgagagtaaatataaagctaccacgggggaccaaaatgctactcatgtctagatttattaacatatatatatgaacgtggacaatactagaaagttttattatatgaaacggaggaagtaactctttttggatgatatctcatacttctttaaactccttttgtgtgtgagagataatactctacattgttaaggcaaagctaaatatttcacactgttcctcatacaaatagaaaattacactgtttgattctcaacacaaaaagcaaaaagaaaagaagaactaattcactgatttgttagctagctccctgttcagtaaccagttgcttctgcatctgaatttctcaattagcagtgactttcaaacaagaattaactgtacattgtactactgattcgctcactgcattcgtcaaaacatgctccagtgcaaattcagaacagaacaacagggttttcttcagtttttacatgctttgccaaattaccatttcaccatttgccagtaaaaacacagaactgataaagcagcttcttcttctttcaggtatgtggccgttggcaatgagcccttcttgaaagcatataatggttcgttcatcaacatcacattgccggcgctgcagaacgtccagaacgcgctgaacgacgccggcattggcgaccggatcaaggccaccgtccctctcaacgccgacgtgtacgaatccacggtgccgtccgccggccgcttccgccccgagatcgccggcctgatgacggacatcgtcaagttcctggccaagaacaacgcgcccttcaccgtcaacatctaccccttcctcagcctgtacctggacgaacacttcccgatcaacttcgccttcttcgacggcggctcaacgccggtgaacgacggcggcatcatgtacaccaacgtgttcgacgccaacttcgacacgctggttgccgcgctcaaggccgtcgggcacggcgacatgccgatcatcgtcggcgaggtcgggtggccgacggacggcgacaagaacgccagggtggacctcgcgcagcggttctacgccgggctgctcaagcggctcgccgctaacgtcggcacaccggcgcggccgaaccagtacatcgagatgtacctgttcgggctggtcgacgaggacatgaagagcgtcgcgccgggcagcttcgagcgccactggggcgtcctccggtacgacggccagcccaagttcgccatggacctcgccgggcagggccggaacacgatgctggtgccggccaagggcatcgagtacctacccaagacgtggtgcgtcatcaacaccaatgccaaggacgtgtccaagctcggcgacaacatcaacttcgcctgcacgtacgccgactgcacgccgctcggcttcggctcgtcgtgcaacggcatggacaccaatggcaacgcgtcctacgccttcaacgcctacttccaggcgcagagccagaaggaggaggcttgcaatttccagggcctcgccgtgcccaccgagaccgaccccaccaccgcgcaatgcaacttcacaatacagatcaagtcgtcggcggcggcggcggcggcggcgccggtggccgccggcgtggtcgtggcggcgctggcacagctcctgcttctgtggtagcattgagatcagtgtgcattgttgatttgttgcattctttggagattttaccctttggattagaagcctgtgatgtgattcaggtgctttttatttgaagaaatagaggaggtggttaatttgttgtgtaattagttgatttgagtacagtttatctgatgacattagcttaaattggtgctttgtttttttttttgctcatatccgtccaatgtccaatgtcgattatctaatattcagaaagttcatctgacaggggaaaaaaactacgctttattctctcaaaataaattaatcattgtactgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0168600, RefSeq:Os07g0168600