Os07g0170300

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Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0170300| Description = YT521-B-like protein family protein| Version = NM_001065526.1 GI:115470784 GeneID:4342510| Length = 4479 bp| Defini...")
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Gene Name

Os07g0170300

Description

YT521-B-like protein family protein

Version

NM_001065526.1 GI:115470784 GeneID:4342510

Length

4479 bp

Definition

Oryza sativa Japonica Group Os07g0170300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3758835..3763313

Sequence Coding Region

3759254..3759490,3759846..3759989,3760135..3760347,3760439..3760990,3761339..3761806
,3761959..3762023,3762133..3762262

Expression

GEO Profiles:Os07g0170300

Genome Context

<gbrowseImage1> name=NC_008400:3758835..3763313 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3758835..3763313 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggctccggcaaatagcgtggcagtggctgatgggaacccaaagacagcgacagagactccgcgggtggaggattacaaggacgctgccatgtactatggaacgtacccggcttatctctatggagcctatggtggctggggggagtactccacatacctgagccatgatggtgcagagacaccaactgctggtgcttatggggatatgtactatggctattctccatatggttattcaacttcaggacatgatagtcagatgtatggatctcagcattaccagtaccaaccgacatacaacaaacaacagaataccactggcaagccttccaacaatggaaaaactgaaaatccggctgcactgccccaaggggatgtctctgctaatggtgttgatagtctgaaaggtcagaaaaagacgaatctgctcccgaaggcaagccagaatacaccaggttccaacggttcctatggccgacctagtgggcgttttggtaactaccagaaccaaactaaccgaacaacttatccatgctacagtagtcaaatcttcaatggcaagcagcaaaaacttcccactggcaatcgttctctgacaacttccaattctaaaagcaagggacagtcaaggaatcagaacacatatcctcatctcatgggtctgcagacacctacttctccgttgggaccaccatcaatttactcggctagtggaatgtatggatacaatgggagttcatatgggtccggcctatggtatggatcacacctgtatggttctggattgtacgggggatggaatgcactgtcggatggcaaatacaatcccagaggaagaggtaatggatcctatggttatatccatggaaatcaggatgggtttaatgagctaagaagagggccaagaagtggtcttttcaataaccaacagggagttggagctactgttgcacctgtgaagggacaagagctttcagccagcgatagctcgctttctgtcatgaaggatcagtataaccgggctgattttgtggaaacatactcagatgctaaattcttcatcatcaaatcatacagtgaggatgatgttcacaagagcattaagtacaatgtttgggctagcacatccaatggtaataaaaagcttgatgctgcttatcaggaggctaaggaaaaatcaagtgattcttctgtgttccttcttttctctgtgaatgcaagtggtcagtttgttggtcttgctgagatggtgggccgtgttgattttaacaagacattggaacactggcaacaggacaagtggactggctgtttccctgtaaagtggcatattgtgaaggatgttccaaacagcttactgaaacacatcattcttgaaaacaatgagaacaaaccagtcacaaattgcagagatactcatgaggtgaaacttgagccagggcttcaagtgcttaagattttcaaggaccatgtctgcaagacgtcgttactggatgactttgatttctatgataatcgtgagaagatgatgcaagagaggaaggcaaagcatcaacaactgaagaaggtcgttgatgagaagctgcttaatgctgtggacactgagaacagcttgttaactgtgaaatccaaattgcaggaaacagctgaggtagagattgatgtcttaaacaaagagcctcatggtaaagcaggacaagttgatgggaaagagaacggtgtgttggccgtttctgtaaatggtgttaccccagaagatgttcagttgacaaacgagaagttggccagtttgagcgtctgttaa</cdnaseq>

Protein Sequence

<aaseq>MEAPANSVAVADGNPKTATETPRVEDYKDAAMYYGTYPAYLYGA YGGWGEYSTYLSHDGAETPTAGAYGDMYYGYSPYGYSTSGHDSQMYGSQHYQYQPTYN KQQNTTGKPSNNGKTENPAALPQGDVSANGVDSLKGQKKTNLLPKASQNTPGSNGSYG RPSGRFGNYQNQTNRTTYPCYSSQIFNGKQQKLPTGNRSLTTSNSKSKGQSRNQNTYP HLMGLQTPTSPLGPPSIYSASGMYGYNGSSYGSGLWYGSHLYGSGLYGGWNALSDGKY NPRGRGNGSYGYIHGNQDGFNELRRGPRSGLFNNQQGVGATVAPVKGQELSASDSSLS VMKDQYNRADFVETYSDAKFFIIKSYSEDDVHKSIKYNVWASTSNGNKKLDAAYQEAK EKSSDSSVFLLFSVNASGQFVGLAEMVGRVDFNKTLEHWQQDKWTGCFPVKWHIVKDV PNSLLKHIILENNENKPVTNCRDTHEVKLEPGLQVLKIFKDHVCKTSLLDDFDFYDNR EKMMQERKAKHQQLKKVVDEKLLNAVDTENSLLTVKSKLQETAEVEIDVLNKEPHGKA GQVDGKENGVLAVSVNGVTPEDVQLTNEKLASLSVC</aaseq>

Gene Sequence

<dnaseqindica>3824..4060#3325..3468#2967..3179#2324..2875#1508..1975#1291..1355#1052..1181#ctcgcagctcaaaaaccctagccgccactccgccatttcggtaaggtttgctgcgactccgccgcgacgcatcttgcgccgccagccgccgccgccgcgcgcctcctcccccgtcgacctcggctgacgcgcggcgccctcgagctcgcgtcgcgtcgcgtcgtgtccctctcggtgagctgctgcatcctggcgctttctctcgttgctctgtgggggagaaaaaccccgtggtttctggtgatctctgcttggttagctagcgttcgttttggatggcgatctttagttggttagatgctgtttggggttgtgatctctgcttgtttaactgttgggttgggtgtggtgatctcttctagttggttgtgattccctgtttgtttagttgatattggggtgttttggtctcagctttttgtgttgctgcttcggatggcggttttccctaaattcctgtgtgggtgtgaacttggatgttgcatccatgaactgctgttgttatccttatgctgatttttgggtgtttggttggtggaagttgatgtttttttatgggtggaggagaggaggaagttgattgctggatgggaacttacaggatggtgatttctctggtgggtgcggatgtgagtttgagtgagatgtgaaaactaggaacacaatatcatctttaagattggaagaaaaaattgagaagaggagtcgcatgactcaagccaaacagtaggaagaaactacaaatcacgcaacacatgagaaaatagaaaacttaaagcccaatagcccaaagtggggctaaagccgtagcaatcaaataccatgccttccctaactcagagcgccgcatgtcctcctttatttgttcttgttctcctgctgtacaggaaaagcattgaccccttcaccattcagtacttactacttggggtgttgcgcaaatcagtcagccatctggtggacatgcatatgcacaaagaacacaattttatggaaaagatcccgcaaggagtaaaaaaaatgttttaacttttcatttgtcttgcagttgatggaggctccggcaaatagcgtggcagtggctgatgggaacccaaagacagcgacagagactccgcgggtggaggattacaaggacgctgccatgtactatggaacgtacccggcttatctctatggaggtgatgcattgctgagttttttcattgttctgttcataccgttgtagttatatgttttgcaaaactgctaggtcaaagttttgaatgatctgtgtttgtgtaaatgtagcctatggtggctggggggagtactccacatacctgagccatgatggtgcagagacaccaactgctgtgagttttccttactgtgcttcacctccatcagtaaatacttttatcctattctgatacattgttcaggatgtgatataaatactgatggtttccatacgcgttggagttgatccattttgtgaatgataatgttctattgcttatttcagggtgcttatggggatatgtactatggctattctccatatggttattcaacttcaggacatgatagtcagatgtatggatctcagcattaccagtaccaaccgacatacaacaaacaacagaataccactggcaagccttccaacaatggaaaaactgaaaatccggctgcactgccccaaggggatgtctctgctaatggtgttgatagtctgaaaggtcagaaaaagacgaatctgctcccgaaggcaagccagaatacaccaggttccaacggttcctatggccgacctagtgggcgttttggtaactaccagaaccaaactaaccgaacaacttatccatgctacagtagtcaaatcttcaatggcaagcagcaaaaacttcccactggcaatcgttctctgacaacttccaattctaaaagcaagggacagtcaaggaatcagaacacatatcctcatctcatggtgagttttactgtccttaatgtttaatggatatattttagttcaattacttgagtcattttttgttgatgttgcatatcttgtttttttggttcaaatgcttgctcaccacaatctgtctatttgtagcattatttggtagccatgtctcttattttctaaaaagtatgtttttgttttatggcgaatgtttgcattgatctgttatttagcatcatattatagcgggacattgtgttattacttatttccattgtttactgtttggcttgtcccctattattaagataacccagatacttacagggttaggatttgcttatctaacttttggagtatctcttttagggtctgcagacacctacttctccgttgggaccaccatcaatttactcggctagtggaatgtatggatacaatgggagttcatatgggtccggcctatggtatggatcacacctgtatggttctggattgtacgggggatggaatgcactgtcggatggcaaatacaatcccagaggaagaggtaatggatcctatggttatatccatggaaatcaggatgggtttaatgagctaagaagagggccaagaagtggtcttttcaataaccaacagggagttggagctactgttgcacctgtgaagggacaagagctttcagccagcgatagctcgctttctgtcatgaaggatcagtataaccgggctgattttgtggaaacatactcagatgctaaattcttcatcatcaaatcatacagtgaggatgatgttcacaagagcattaagtacaatgtttgggctagcacatccaatggtaataaaaagcttgatgctgcttatcaggaggctaaggaaaaatcaagtgattcttctgtgttccttcttttctctgtaagttttatcagttcatttgtgttttcttacagtaggtcatgatgattttccctgtttcttatgctggctgtttattttcatttcccaggtgaatgcaagtggtcagtttgttggtcttgctgagatggtgggccgtgttgattttaacaagacattggaacactggcaacaggacaagtggactggctgtttccctgtaaagtggcatattgtgaaggatgttccaaacagcttactgaaacacatcattcttgaaaacaatgagaacaaaccagtcacaaattgcagagatactcatgaggtattatttttgtttctaacccagtcttttgttcgttggcccttagggcttctaatggtatggcaaattggtactccattttgccgtgaattattggaacaaaaatgcttaataaggatttttgcaccttttgtggcggccacaggtgaaacttgagccagggcttcaagtgcttaagattttcaaggaccatgtctgcaagacgtcgttactggatgactttgatttctatgataatcgtgagaagatgatgcaagagaggaaggcaaagcatcaacaactgaagaaggtatggaacttggctcttgcatttgttttctgctattctgttgtggtgtttaaacatagtgctgattgtttttgtatggccatacattgcatgtttatttgtgatataagtctatggcatataaaatgcttccactatttgcagtgagtaatagagcatgcagctagagtttttctctccttccaggacgggaatgaaaatgttaaattacttatttgtgatttttgtggtagtctaatttaccaaatttgttaagaccatgtttaatagttaagccatctcttatatgaaagcctttgattagctctcggctttcttgagcacttatcacaggtgctatatgtttgtgctgtaggtcgttgatgagaagctgcttaatgctgtggacactgagaacagcttgttaactgtgaaatccaaattgcaggaaacagctgaggtagagattgatgtcttaaacaaagagcctcatggtaaagcaggacaagttgatgggaaagagaacggtgtgttggccgtttctgtaaatggtgttaccccagaagatgttcagttgacaaacgagaagttggccagtttgagcgtctgttaagttttttctcatcatttcagccattgaggggtggtgtaaggtgaagggctatataggttgggaaggcagcaatcaaggcaattcaagatccatttgagtttccttgtgagtttctccgttgcttttggttaggacttggaggtggtttcataggagagctagaagtttagctgattgtgtctggtgagatgtgcggatagcagtagaggttttttggacttttggttttcaatgatggatcattggtttgcgcagttccttttcttttatattctgttctcttttgcgttgggcaggtgtagctttttttagtatgtttggtgtctgaacctgaaagcatgtcaagagtgtttaaacctgggaattcaattaagaaatttactcttttgttccaatgcttattttctgatattgctttg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0170300, RefSeq:Os07g0170300