Os07g0172200

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Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0172200| Description = Conserved hypothetical protein| Version = NM_001065532.1 GI:115470796 GeneID:4342516| Length = 3360 bp| Definition ...")
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Gene Name

Os07g0172200

Description

Conserved hypothetical protein

Version

NM_001065532.1 GI:115470796 GeneID:4342516

Length

3360 bp

Definition

Oryza sativa Japonica Group Os07g0172200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3829497..3832856

Sequence Coding Region

3829518..3829826,3829918..3830028,3830173..3830259,3830359..3830591,3830808..3830886
,3831173..3831316,3831529..3831568,3831667..3831767

Expression

GEO Profiles:Os07g0172200

Genome Context

<gbrowseImage1> name=NC_008400:3829497..3832856 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3829497..3832856 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaagaagaaggaggccggcgatgcggaggccgacgagcggcgccgcctccgctccctcgccttctctaatggcttactccagcgcggggagccggcggcgccgcgctcggcgctcgcgccctccactgccgtgtcgcggctgcagggccgcgacatcgtgcgccgcggcgggcagcgcaagagccgcttcctcttctcattccccggcctcctcgcgcccgcggctgctgcctcgggcggccgcgtcggcgagctcgctgatcttggcaccaaaaatcctctgctctacctcgacttcccacaggggaggatgaagctgttggggacgcatgtgtaccccaagaacaagtatctgacactgcagatgagcaggtccaccaagggcgttgtctgcgaggacgtcttcgagagcctgattgttttttctgaagcctggtggattggaacaaaagaagaaaacccacaagaactgaaactggattttccaaaagagttccagaatgatggggctgttgcagattctgattttaaaggtggagcaggtgcttcctgtgatgaagctgttaccatcaataaaccgccaaaggaaaccaccacaggatccctttccccaaagattgaatctgacattgattcttccgaggattcagaccttaaggacgaggataacacacaaagcactagtcaagcaccttcagttaggcagtctgctagaactgctgggaaagccttgaagtatactgagatatcctctggagacgattcatctgataatgacgatgagattgatgtccctgaggacatggatgagaaggtgaagagtccggcagttaagaatgaatcccaaagtgaagacattaaacctgcagattcatctgcgcagcctatctcagctaagaaggagccactcgttcaggctactctgtctagcatgtttaaaaaagcagaagaaaaaaagagatgtactagaagcccgaaaggatctccagcaacaaaaggacctgctgctaagaagcagcgagcaagtccagaggaaaaacatccaacagggaagaagagtggtaagtgcagtagcaagtctgttgttagaagcatctaa</cdnaseq>

Protein Sequence

<aaseq>MVKKKEAGDAEADERRRLRSLAFSNGLLQRGEPAAPRSALAPST AVSRLQGRDIVRRGGQRKSRFLFSFPGLLAPAAAASGGRVGELADLGTKNPLLYLDFP QGRMKLLGTHVYPKNKYLTLQMSRSTKGVVCEDVFESLIVFSEAWWIGTKEENPQELK LDFPKEFQNDGAVADSDFKGGAGASCDEAVTINKPPKETTTGSLSPKIESDIDSSEDS DLKDEDNTQSTSQAPSVRQSARTAGKALKYTEISSGDDSSDNDDEIDVPEDMDEKVKS PAVKNESQSEDIKPADSSAQPISAKKEPLVQATLSSMFKKAEEKKRCTRSPKGSPATK GPAAKKQRASPEEKHPTGKKSGKCSSKSVVRSI</aaseq>

Gene Sequence

<dnaseqindica>22..330#422..532#677..763#863..1095#1312..1390#1677..1820#2033..2072#2171..2271#aagaaggaggagggaggagggatggtgaagaagaaggaggccggcgatgcggaggccgacgagcggcgccgcctccgctccctcgccttctctaatggcttactccagcgcggggagccggcggcgccgcgctcggcgctcgcgccctccactgccgtgtcgcggctgcagggccgcgacatcgtgcgccgcggcgggcagcgcaagagccgcttcctcttctcattccccggcctcctcgcgcccgcggctgctgcctcgggcggccgcgtcggcgagctcgctgatcttggcaccaaaaatcctctgctctacctcgacttcccacaggtatcctatatctatctatctatctatctattccgtcaggtaggtgagatggtatgatatgtatgttgtgggtgggtaatgaatgtttcaggggaggatgaagctgttggggacgcatgtgtaccccaagaacaagtatctgacactgcagatgagcaggtccaccaagggcgttgtctgcgaggacgtcttcgagagcctggttacttcaaacttcacatctttgctctgcctgccctgtatctatcttggaagtggaacttgcatccgcagaattgctgctatgctcgtcccttttctctggggtgttattggtaactacttatgctgctgttttatttggcagattgttttttctgaagcctggtggattggaacaaaagaagaaaacccacaagaactgaaactggattttccaaaagagttccagaatgtgcgtgtgctctccatccatatatgttcttaattttcgcttcttctacgacgctactgtgcctctcatctcatgtgcttcttcatttcaaactggtaggatggggctgttgcagattctgattttaaaggtggagcaggtgcttcctgtgatgaagctgttaccatcaataaaccgccaaaggaaaccaccacaggatccctttccccaaagattgaatctgacattgattcttccgaggattcagaccttaaggacgaggataacacacaaagcactagtcaagcaccttcagttaggcagtctgctagaactgctgggaaagccttgaagtaagtcagtttcacccttttctgttgctctctcggataaacagaaaagcacacggactctagttgttgcttagcagctgaaagattgcctactacctgtatttatttggcttaacggctaatgtttctaaaaacaaatatattcatctcccacccacccaaaaaaaggcaaagaataaaaaggtatacttgatagatccctcgctctttatgcaggtatactgagatatcctctggagacgattcatctgataatgacgatgagattgatgtccctgaggacatggatgagaaggtagtgataccgaatttaatttcccacgcttttgttgcatataacgtaaaagtagcagcatataatgtaaaagttgcagttttgtgaaaatttcccacgctattgttgcaggaaactgaaacatgtcgcttatgttgcagcaaactgatagttttgtcactaaagttgcagttttctgaaatttactcaattttataagattcaaatatatgaatcaatgtctatcaagcttttatcttttgtaaataattttattgtgtttatttgctttcttcgtttgaagcaggtgaagagtccggcagttaagaatgaatcccaaagtgaagacattaaacctgcagattcatctgcgcagcctatctcagctaagaaggagccactcgttcaggctactctgtctagcatgtttaaaaaagcagaagaaaaaaaggtggaaattcatacctgttattataatagtttctctccttgtgatagtgggcagttatacccttaacttcgatataatgtttgcttgatgcattaattgaaccaacttcacaacatacctcttttttcgtatgtgtgttttgaacattatctgttttcatgcctggtacaaataaattagttaagcatctgacaaaaggatttctatttcagagatgtactagaagcccgaaaggatctccagcaacaaaaggttcttcatatttacgcaattctaggtttcttgtgttttcctttattacacaacgaaaattccttttgattggacttgtgattggcattgttctacaggacctgctgctaagaagcagcgagcaagtccagaggaaaaacatccaacagggaagaagagtggtaagtgcagtagcaagtctgttgttagaagcatctaatagaccttggtgcgattacatttgttttaagcctctgaaggccttcttcaatggagaagacttgttctaaaataatccaaaggctttgggaggcttacttgagaagctttcagcttttgtctatgtaaggggcatttaaaatattaatccatttcatgaagctttaggaccatctcaagcctgtcgaatcggaataaatgatggaattaacatctattgtggtggctctatactaaatatgctatttgaattttacaagacttgatattgctgggtaaaagctgtgatgcatggggggaaacaaatgcattttagtggctcttagtgcaatgtgcaacgatctatcagcttttctttaactgagtacatcagtacatgttagtgttcttcatatgaagctgacaattgtatttacatggatgtagctggcagaagtcagaaaaagagaaaaacacaggtactttacttagcaacaatgatcagggattttaatttgaatgtcgcccattgtttactttgctgattgcctttgccctcatttttctgtcacaggtagaagatgacgaaattgaagtgctctcaagttcctcccaggtgattgtttttctgatagctacagtgtagtagattggtacattatggccattgttcttgttgttgttgttgttgttatgaggttgtgccttcctcccagctaatcctaacagcatatgacaggataacaatgtggacgatgatagcgatgaagactgggctgagtgatgtgcagctgaagttgaaaggaatgtagcactcggtgatgaagagtgaaggatgcaagattgtgggcaattgttttcttttggggcaatatcacaattgatgtgtttgaggagcttaggttctgacctgaccattgatgagatatatcatcatagtcttttcatcgtactggtgaaattgaaaaccgagaagtgtgatctgttagcactagatttattatttatttgacttgttgtaatgtaacataaacaagagctgataaatcattgttagggtctgcaatgcaaattagtacggcaattgcagatataaactataccattgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0172200, RefSeq:Os07g0172200