Os07g0173400

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Revision as of 08:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0173400| Description = Conserved hypothetical protein| Version = NM_001065540.1 GI:115470812 GeneID:4342524| Length = 3417 bp| Definition ...")
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Gene Name

Os07g0173400

Description

Conserved hypothetical protein

Version

NM_001065540.1 GI:115470812 GeneID:4342524

Length

3417 bp

Definition

Oryza sativa Japonica Group Os07g0173400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:3896963..3900379

Sequence Coding Region

3896965..3897066,3897908..3898115,3898224..3899422

Expression

GEO Profiles:Os07g0173400

Genome Context

<gbrowseImage1> name=NC_008400:3896963..3900379 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:3896963..3900379 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aggattcatggaactgacttagcagaaatgccattcataggaacaaggggcatatataggcgccaagggatgtgccatcggctactcaatgcaattgaatcggccctttcctccctgaatgttcgaagactagtaatacctgccatacctgaattgcaaaatacctggactactgtttttggttttaaacctgttgaaccttccaagagacaaaaaatcaagtctctgaatatcttgattatccatggcactggtcttctagagaagcggttgcttgcaacaggcactattaaccaagagaacactactgttaatgatatgatggatgctcaaacacatgttgaagcaaccggatcccggacacctgttcatttttcctgtgaattaccagtgggtggtgatcctgatattaagcatcatgatgactctcatcctttagttgggaactccaaaggcttgacacttaatctgccttgtgttcctgaagaaaaaactgcagaattgacatctccagtattagatgttgttcagtgcatgcctgaatctgaaaatactcaagaaatgaaaaatggagaaacagatgcgacactgacttctgaggacataattgcagaacagaagtatgaagataaatctaattccagtcttacagattcatctgctattcccatgacagtggatccaggctcatgttcatccaatgagactgtgaaaggagaacatcacacatctagtgaaccttctgttgaagctattctagtaagagacaaacctgaaccttccatctcttgcaacgttaccaaccaagaagacaaaaactcttccatggttcctgttgatacgacagttcatttagccactatagttgggaatcatgatattcagaattcagtggaagtcaaaggtatggaacataatacagctaaggatcaaacttttgttagtgctgtagctaataatgttgctactactgaagatcccagtgattctgtagctgactgtgaagtgccaatagtgaggtctattcagcagaaggatgaggttatcgcagacaaaaatgcttgcgcaactatagatcaaactgctgttgacgatgtagctaataattttgttgctaccactgaaaatgacactgattctacagctgaacttggagtgtcaatggagagatgtatccagcaaaaggttgaggttatcaaagacaaaagtgattcaccattgagaacttctataagcaaagttatgttggagaaatcggatcaaatgaagtctactgaaagtgatagtgttaaaatgaaggacatggcgattgaggtgaaagtcacagttgagaacttcagtgaagcaggtaaaccagcttcagcgcttgtcatgtcaaatgacattaatggtgaagttatggctaagcctaatctaacttgtggggatgatcaacttcatggaggggatgggacatacaaaaatagcatggaagatgacctagcttccagagaacctgttaatgcatga</cdnaseq>

Protein Sequence

<aaseq>RIHGTDLAEMPFIGTRGIYRRQGMCHRLLNAIESALSSLNVRRL VIPAIPELQNTWTTVFGFKPVEPSKRQKIKSLNILIIHGTGLLEKRLLATGTINQENT TVNDMMDAQTHVEATGSRTPVHFSCELPVGGDPDIKHHDDSHPLVGNSKGLTLNLPCV PEEKTAELTSPVLDVVQCMPESENTQEMKNGETDATLTSEDIIAEQKYEDKSNSSLTD SSAIPMTVDPGSCSSNETVKGEHHTSSEPSVEAILVRDKPEPSISCNVTNQEDKNSSM VPVDTTVHLATIVGNHDIQNSVEVKGMEHNTAKDQTFVSAVANNVATTEDPSDSVADC EVPIVRSIQQKDEVIADKNACATIDQTAVDDVANNFVATTENDTDSTAELGVSMERCI QQKVEVIKDKSDSPLRTSISKVMLEKSDQMKSTESDSVKMKDMAIEVKVTVENFSEAG KPASALVMSNDINGEVMAKPNLTCGDDQLHGGDGTYKNSMEDDLASREPVNA</aaseq>

Gene Sequence

<dnaseqindica>3..104#946..1153#1262..2460#tcaggattcatggaactgacttagcagaaatgccattcataggaacaaggggcatatataggcgccaagggatgtgccatcggctactcaatgcaattgaatcggtaatatggcgtttcttttcttcttttttctgtttggagctgtgtaaaagctggtttgttccaccaactactaaagatttcttgtttcatcatttccaaagatttcacatgtaggtgtaatactattggaagtatgtgtcccaattttttctagaattttttgtgacatttgctacttggtgtgcacggagtgtgcacgggaagcttgtgtgcataggatatattcccttatcccccttataatagttccaaatccccagtttaactgtatgattgttgctgggaactggcgatcctgctgtcactgggaaatgcttttttcttagagacctcccattttagatgttttcaattttttactctatttgctttgtatgtcgaaatctgttgaaattgtaactaaaaacgagaaaataaaatgaaatgtgacaaggactgagcttggtaactgcctcctaccaggccctgtcccaagaaacttgtcctgaaggggccttgctgtcttgaaaacttgttctaggtgaacatcattatatttgttgtaactgttatgtacgtgcaaaactatatatgtattctcttatgtcttttaaggtaaatgaggtgttgtagaaaggtatgaagtattacttcagttttagctgatgatgataaagtgatacttcgtacttagttgtttacttttcacttgaagctttagcttcatgtttgagttgtacaaactagattttgatattgttgagcaatatttttccttgtttgttttgatgtaccagtgttttctttgtttcattttcggacgagtttctaatattttcatgggtaatttattgttttgtaggccctttcctccctgaatgttcgaagactagtaatacctgccatacctgaattgcaaaatacctggactactgtttttggttttaaacctgttgaaccttccaagagacaaaaaatcaagtctctgaatatcttgattatccatggcactggtcttctagagaagcggttgcttgcaacaggcactattaaccaagagaacactactggtacaggctaccataccaaattatcatgagaatattccttgaattctcttgttaagattattgtaacaattcaattttatatctcaaacactctttgtgtttatgcagttaatgatatgatggatgctcaaacacatgttgaagcaaccggatcccggacacctgttcatttttcctgtgaattaccagtgggtggtgatcctgatattaagcatcatgatgactctcatcctttagttgggaactccaaaggcttgacacttaatctgccttgtgttcctgaagaaaaaactgcagaattgacatctccagtattagatgttgttcagtgcatgcctgaatctgaaaatactcaagaaatgaaaaatggagaaacagatgcgacactgacttctgaggacataattgcagaacagaagtatgaagataaatctaattccagtcttacagattcatctgctattcccatgacagtggatccaggctcatgttcatccaatgagactgtgaaaggagaacatcacacatctagtgaaccttctgttgaagctattctagtaagagacaaacctgaaccttccatctcttgcaacgttaccaaccaagaagacaaaaactcttccatggttcctgttgatacgacagttcatttagccactatagttgggaatcatgatattcagaattcagtggaagtcaaaggtatggaacataatacagctaaggatcaaacttttgttagtgctgtagctaataatgttgctactactgaagatcccagtgattctgtagctgactgtgaagtgccaatagtgaggtctattcagcagaaggatgaggttatcgcagacaaaaatgcttgcgcaactatagatcaaactgctgttgacgatgtagctaataattttgttgctaccactgaaaatgacactgattctacagctgaacttggagtgtcaatggagagatgtatccagcaaaaggttgaggttatcaaagacaaaagtgattcaccattgagaacttctataagcaaagttatgttggagaaatcggatcaaatgaagtctactgaaagtgatagtgttaaaatgaaggacatggcgattgaggtgaaagtcacagttgagaacttcagtgaagcaggtaaaccagcttcagcgcttgtcatgtcaaatgacattaatggtgaagttatggctaagcctaatctaacttgtggggatgatcaacttcatggaggggatgggacatacaaaaatagcatggaagatgacctagcttccagagaacctgttaatgcatgactttgcatttcctgctacaaaatgtttaaggtatcccatatcctagaatttgagctcatcgtttgataatcatattattcacatactaaattattccctgccctttttttgctgttctctctctcccccccccccacccctcccctccaaatggtaatgattttcttgacaataacctacttcaagctacaggcatgatagttttaagaatgctccaaatcattcaaaattagctgtagaacttgtaatataacatcaaagaattgatccatgatcatttgcaatgcttatgttccatgcgaatttactatcatttattctgatatattgatagatttctttagtggcctaataattcctaggagaaaaggactaaaaagaaatcctgctagaaaaccccatatctagttttagtttccttaacatggacaataacaaaaacttgaacataggaaatccattggtaatttctaattccatggcagttctctctttttttagttatattccccacttgttccattatcaaaaggaactttattgaatttgttttgaatccgtaatttctggactaagaactttgtcttacctttttatgcttacagtgagcagagcaatgggagggacgatctagttttctgcaagtagctgcctcagctcgttctccatggctacaacgaagtgtttagagttgcattttgcagcaatgaaatgctgatgtttcagaattttggtagtctgtcgatcatgggggctttttgttggtttagtaggcataagtagttcacaccgtaggacctcttatacaaaccccaaaaagtgggccaaatttttggtgtaaatacatgtgggaaattgctgttggcattttggtgcacctgaaatgttgtctgaagattgtcgatgaaaacagacttgcaggtagtgcctgtacagatataaaaatccatcctcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0173400, RefSeq:Os07g0173400