Os07g0210000

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Revision as of 08:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0210000| Description = Exo70 exocyst complex subunit family protein| Version = NM_001065705.1 GI:115471142 GeneID:4342707| Length = 4480 bp...")
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Gene Name

Os07g0210000

Description

Exo70 exocyst complex subunit family protein

Version

NM_001065705.1 GI:115471142 GeneID:4342707

Length

4480 bp

Definition

Oryza sativa Japonica Group Os07g0210000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:6004291..6008770

Sequence Coding Region

6004370..6004559,6005089..6005207,6005411..6005520,6005645..6005654,6005733..6005749
,6007156..6008650

Expression

GEO Profiles:Os07g0210000

Genome Context

<gbrowseImage1> name=NC_008400:6004291..6008770 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:6004291..6008770 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatggaagaagacggcggcggcggcaaggtggtgtacgtggcggtcagcggcaacaggaacaaggcgctgccgacgctgcggtgggcgctgcgtcgccacgccccggcgccggaggggaggaagaagaccgcgctgctggtgctcgtgtatgtgcaccggccagccaccatgatcccaatcttcagagcaaaggtgccttcaattgttctcaaggatgaaatagtcacttcttaccggcagcaagagaggaggattactgaaaaatttctccaacaatacctggacatctgcacatctgaaaaggttcaagctgaggcattcatgattgcgaatgacaacattgcgcatggcctcataggggcaattcaagagcataagatcagcacactcatcatgggagctggcatatatgggaaaacaagcaatctattctccatcaggcccaggactacaagcatccccatctctgtgaatagtgatgttcctactatggcaggttctcacataccttggttcagcttcattcctccttggcaccatgatgaccgcagcagcgtcacatcttcttccttcctcaccgactcgcaaaccatgaccgacaatgggcttgatccagaaaatctagaccaccaattcttcgaaaatgcgatgcccatgttcgattatgacagcttcagccttatcagacatgaatccctccatggcctaaatgagatagctagccagatcatactgtctggccattcacagtacttgcgccagttgaatttcgatgtaagctgcaatgaggaagtaagaaaccgccagttcattcacggtatcgactcgatcctcggagtcgattcgatgaaccttgaggaggtgtactggaaggcctacatggaggacaagacaatcaagtggatttatctactggagtacatccataagattgtatcagtctcactgaagcaaatccaggagcagcatgatggtgcctctagtggcctgacacttgaaggcctctcagatgctgcaaccaagcctatcaatcgattgctcacatttgcgtcgacggtcagtaaggtgaatggttcgccggagaagctcttccatacgttgcagatgcacaaggcattgtcagaagcttctccgatgatccaacaagccctcttgggagaacagaaagagttcttcgtcagagagcttcacagaattcttgacacgctggaggactctgcaagggaaatacttggtaagctgaaagtccagattcaatcacatgattcaccgatcataccaggaggcagtgtacacttggttacaacatacctcatgagatatatcacattgttggcacataacaccagctcactgaacaccattctaggtcatgatcatagtgaccatctgttggcagctgacggaatcaacttgctgttgccaagccacctaatttctggcttgatattcgatcttggctcgatgcttcagaagcagtctaagctgtacaaacctgaaggattgcagtacctgttccttatgaacaatgagcattttattcttcagcactttgagcgggaagacataaaacttatgataggaactgagtggattcaaaagtactgtcataacatcaaccgatacaaagtgaaatatatagaagcaacatgggctactgtggtatcttgtttggacaagaagatcagcatttcactaaattttctgcaaccttcacccttgaaagaatttatttcctctttcgaaacagagtatagactccagatgcactggaaggtccctgatccaaagctccgtattgagctgagacaaactgtctgtgactatgttctgccagcctattgtgaattcatggagaagcatccaaatttagagaaatcaggggacaatcttgaagatatcaggaacaaattaaatgaactgtttgaaggatga</cdnaseq>

Protein Sequence

<aaseq>MEMEEDGGGGKVVYVAVSGNRNKALPTLRWALRRHAPAPEGRKK TALLVLVYVHRPATMIPIFRAKVPSIVLKDEIVTSYRQQERRITEKFLQQYLDICTSE KVQAEAFMIANDNIAHGLIGAIQEHKISTLIMGAGIYGKTSNLFSIRPRTTSIPISVN SDVPTMAGSHIPWFSFIPPWHHDDRSSVTSSSFLTDSQTMTDNGLDPENLDHQFFENA MPMFDYDSFSLIRHESLHGLNEIASQIILSGHSQYLRQLNFDVSCNEEVRNRQFIHGI DSILGVDSMNLEEVYWKAYMEDKTIKWIYLLEYIHKIVSVSLKQIQEQHDGASSGLTL EGLSDAATKPINRLLTFASTVSKVNGSPEKLFHTLQMHKALSEASPMIQQALLGEQKE FFVRELHRILDTLEDSAREILGKLKVQIQSHDSPIIPGGSVHLVTTYLMRYITLLAHN TSSLNTILGHDHSDHLLAADGINLLLPSHLISGLIFDLGSMLQKQSKLYKPEGLQYLF LMNNEHFILQHFEREDIKLMIGTEWIQKYCHNINRYKVKYIEATWATVVSCLDKKISI SLNFLQPSPLKEFISSFETEYRLQMHWKVPDPKLRIELRQTVCDYVLPAYCEFMEKHP NLEKSGDNLEDIRNKLNELFEG</aaseq>

Gene Sequence

<dnaseqindica>80..269#799..917#1121..1230#1355..1364#1443..1459#2866..4360#ggacgtgccgctggtgccagtgccaacgacggcggccgacgacgacgcggcggcggggtcgccgtcgccgtcgccggagatggagatggaagaagacggcggcggcggcaaggtggtgtacgtggcggtcagcggcaacaggaacaaggcgctgccgacgctgcggtgggcgctgcgtcgccacgccccggcgccggaggggaggaagaagaccgcgctgctggtgctcgtgtatgtgcaccggccagccaccatgatcccaatcttcagtgaggcttcccattgtttaatttctcttgttttttttttctttcaaggaaatggtgatgattcagtgcatataagtttcctgtgtcgtaatgagggttttgaattttgaaacatgggtttttgccggtggggaccgaaagaaccgaaattttgtttttttaaaagaattttaacatattttaactgaatttaaataaattttaatcaaatttacaaatatttgataaaaacaagtaattttggggagatttttgcttgccagtgggggccgaaattaccaaaattttcgaaccgaaatttcaacccatggtcgtaaaacaccttgtagaaaagaaaaaaaacctttcgtaaatagcgtaccatgaactcaggactttagggtgctagtcaggtcacttaaaccactagcctatatagcttttcgcaaggcgtctttgttgtgatgttggtgggtggtggccgaatttgtggggagaaaaaaaaagagatacttgagattaagatcctcccaattttgtattccagcaggagcaaaggtgccttcaattgttctcaaggatgaaatagtcacttcttaccggcagcaagagaggaggattactgaaaaatttctccaacaatacctggacatctgcacatctgaaaaggtggaaaatcaagctcattatacatatcactgaataaaattccttcttctgttggttgttggtgtctctgcaatctgcatttccctctagcttttgtgtacagaatgtctctagagaaccacctcaccacctcattttgtcgatattttgctacagagaatgtctctagcaaaccacctcattttgccgatatttcattacaggttcaagctgaggcattcatgattgcgaatgacaacattgcgcatggcctcataggggcaattcaagagcataagatcagcacactcatcatgggagctggcatatatgggtatccagccctcccaaagttatttatttttatcacttcaatttccatttctaacaaaattctccgaactgatcggtgctcttgtaacaatgtgatgcattattgcaccttttcttcttggcaggaaaacaagcacccaaaggacaaagctagcaatcaccatggagaaggaagctgatccatcttgtaagattttgtttgtccacaagggaaatctattctccatcaggtagttgttctttgaggagcactcagtattcatggcttcttttctttctaagacaatacaagaaaaattctggcatctacacctgtagatagacataacagttacattacataaatgcgacaatctgccaaatctttatctattatatactataaaagtccattaaacatcctacaaacgctcttaagccgccacgtggtactcctacaaatactcctataacgcctcgtggcactctaatatattaaagaaattgctataaattgtaagaataaagtaaaacatctagccttcagttttcatttaattcggcgggcctgttattttgatccatcagatcaaatcacatgctaatctccatggccccacccctagcctgtatgtaatccagtttgtgcttccgcatcacgtatgcatactcccgtccgctccttcacgccctccaatttcctttcaattcccaatttatgttagttagaaaacataatttataataaaaattaaaaacatctaaatcatagagataatttttcatctgcttatgtatcactaatttacatggtaaaaactcatatttaattatattttaacttgcaaaaaagaaatttgttagcgttgggttgtaacaattataagaaaatatgaaaataataattgtatagtagtagattttagagattaccatcgtacatcacctcataataattaaattagatctataattgtaaaaataaaaatgaacctagttatgagtgatattctaaaaaactattccctccattatgaaattattacaagtcaaaataacattattgtatttatcatgaaaactactttcatatggatgcatacttttcatatttacactaatacatttttaatatgtttcctactctctccatcccaaaatataagggattttggatggatgtgacacatcctagtactatgaatctgaacatgatatgtcacatccacctaaaataccttatagtttgggatggagggagtaggaaaaataccttacttttaatttacgcttaatttttttagtcattgttttaaataaacaatttcctatagggatgaattaaatattttataatataaaggtaacaaatagcttagaaaaattatctaagcaattctagtaaataaaatttatggagaaatagtatacttttaaagcgtggtagatatcctccggttgatggtccacatttataagttctttaaacatagcctacgaccctatgctcgcgtatttgggcgggctaccttgttgataaaatgaatgtataactagctacagcaactcaataattccaaccatgttcatggttttttgccttgtactttttaaaatggaaaatgctgtcaacaaccagagatgcaatgttttgcaggcccaggactacaagcatccccatctctgtgaatagtgatgttcctactatggcaggttctcacataccttggttcagcttcattcctccttggcaccatgatgaccgcagcagcgtcacatcttcttccttcctcaccgactcgcaaaccatgaccgacaatgggcttgatccagaaaatctagaccaccaattcttcgaaaatgcgatgcccatgttcgattatgacagcttcagccttatcagacatgaatccctccatggcctaaatgagatagctagccagatcatactgtctggccattcacagtacttgcgccagttgaatttcgatgtaagctgcaatgaggaagtaagaaaccgccagttcattcacggtatcgactcgatcctcggagtcgattcgatgaaccttgaggaggtgtactggaaggcctacatggaggacaagacaatcaagtggatttatctactggagtacatccataagattgtatcagtctcactgaagcaaatccaggagcagcatgatggtgcctctagtggcctgacacttgaaggcctctcagatgctgcaaccaagcctatcaatcgattgctcacatttgcgtcgacggtcagtaaggtgaatggttcgccggagaagctcttccatacgttgcagatgcacaaggcattgtcagaagcttctccgatgatccaacaagccctcttgggagaacagaaagagttcttcgtcagagagcttcacagaattcttgacacgctggaggactctgcaagggaaatacttggtaagctgaaagtccagattcaatcacatgattcaccgatcataccaggaggcagtgtacacttggttacaacatacctcatgagatatatcacattgttggcacataacaccagctcactgaacaccattctaggtcatgatcatagtgaccatctgttggcagctgacggaatcaacttgctgttgccaagccacctaatttctggcttgatattcgatcttggctcgatgcttcagaagcagtctaagctgtacaaacctgaaggattgcagtacctgttccttatgaacaatgagcattttattcttcagcactttgagcgggaagacataaaacttatgataggaactgagtggattcaaaagtactgtcataacatcaaccgatacaaagtgaaatatatagaagcaacatgggctactgtggtatcttgtttggacaagaagatcagcatttcactaaattttctgcaaccttcacccttgaaagaatttatttcctctttcgaaacagagtatagactccagatgcactggaaggtccctgatccaaagctccgtattgagctgagacaaactgtctgtgactatgttctgccagcctattgtgaattcatggagaagcatccaaatttagagaaatcaggggacaatcttgaagatatcaggaacaaattaaatgaactgtttgaaggatgagttgatacttttatgattacaaaaacaaattcttacttgttctcttgttccttcaattcatgcaaggaaaattgtaacacatactaattcaatgattgttaaattaacttttcattatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0210000, RefSeq:Os07g0210000