Os07g0227400

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Revision as of 08:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0227400| Description = Similar to RNA binding/signal transduction protein QkI-4| Version = NM_001065751.1 GI:115471234 GeneID:4342758| Leng...")
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Gene Name

Os07g0227400

Description

Similar to RNA binding/signal transduction protein QkI-4

Version

NM_001065751.1 GI:115471234 GeneID:4342758

Length

5628 bp

Definition

Oryza sativa Japonica Group Os07g0227400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7152942..7158569

Sequence Coding Region

7152976..7153061,7153222..7153310,7154862..7155013,7155254..7155382,7155465..7155581
,7156353..7156496,7157953..7158096

Expression

GEO Profiles:Os07g0227400

Genome Context

<gbrowseImage1> name=NC_008400:7152942..7158569 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:7152942..7158569 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcaggcggcctctacaaccaccagggtttctccccggcaagaaccctctcgccccagattaggagcaaccccgaggccgatagccagtacttgagcgagctgctcgcggagcatcacaagctggggcctttcatgcaggtgctgccgatatgcagccggctgctcaaccaagaaatcatgcgggtatcaagcatggtcaacgaccatggattcaacgattttgacaggcgtcgttatagaagtccgagtcccatgtcttcgccaattatgagacccaacctacatggcaatggatttgggccttggaatggcatacaccaagagagattaggctttcctcctcctcctcctcctgggacaagtatggactggcaaggcgcaccgccaagtcatggctcttatattgtcaagaagattgtacgcatggaggttccagttgatgcttaccctaatttcaatttcgtgggacgtattctaggaccgaggggtaattctctaaagcgggttgaagcatcaactggttgtcgtgttttcattagagggaagggttctatcaaagatgctgataaggaggagaagctgaaaggaaaacctggctatgagcacctcaatgatccactgcatatcttgattgaagctgagttgccagccaatatcattgatacaagattgaggcaggcacaagaaataatggatgaactgctaaaaccagtggatgagtcgcaagattactataaaagacaacagctgagggaactggcaatgctgaactctactctgagagaggacagtcctcatccaggaagcgtctcccctttcagcaatggtggcatgaaacgtgcaaaaccgagccattag</cdnaseq>

Protein Sequence

<aaseq>MSGGLYNHQGFSPARTLSPQIRSNPEADSQYLSELLAEHHKLGP FMQVLPICSRLLNQEIMRVSSMVNDHGFNDFDRRRYRSPSPMSSPIMRPNLHGNGFGP WNGIHQERLGFPPPPPPGTSMDWQGAPPSHGSYIVKKIVRMEVPVDAYPNFNFVGRIL GPRGNSLKRVEASTGCRVFIRGKGSIKDADKEEKLKGKPGYEHLNDPLHILIEAELPA NIIDTRLRQAQEIMDELLKPVDESQDYYKRQQLRELAMLNSTLREDSPHPGSVSPFSN GGMKRAKPSH</aaseq>

Gene Sequence

<dnaseqindica>35..120#281..369#1921..2072#2313..2441#2524..2640#3412..3555#5012..5155#cctcctcctcctctcctcgctcgtggccgccaccatgtcaggcggcctctacaaccaccagggtttctccccggcaagaaccctctcgccccagattaggagcaaccccgaggccgataggtacggcctcgcccgcttccgccgccgccgtggattgctactgtgtttcttgctgattctttgatccaaggattgcttcttgctcttggttgcgtgcccttttttcgatttgtttaggtgattggttgtgcgatttcttgggttttgtttctttttgcagccagtacttgagcgagctgctcgcggagcatcacaagctggggcctttcatgcaggtgctgccgatatgcagccggctgctcaaccaaggtgagatcttttcttttttttgattgattgattgattgatctctcgcttactgtttgtcacggattggtgggggttgtgtttgtttcgtgtgaggaagaggggggatttgtggtgttagttttgcaatcgggatttgggaatcgggtggctccaatgcgtggaatgatgctgctgattttgcctgcagcttatgtttggatagagttgccgagttgccctcttgttctttctcgggaatttttcgttgccaatcgagataagattgttagaatattttgggggttatatgcacaacacaacagagatgaccgagtgtaatggtataatacagcatgcgaatcaaggcttgttgcgctgttttggtgattgccattgaatttttgccttcaaataatgtagatgtttcgatgtattgagacttgttgagaactgaagatcaatgatgaaaaataaagtggtgatgagaactagtagttgtcaagatttatgtgtagagttgcaatcatttgtccattgcatcagcagcagacaatggtatgcgcattgtggatacaggatgattactgatctgttaggtgcggctagcagcaagtagccaacaagatgtcctggctgctatgtcgctacccaggcaggcaaggtgggcacctaagtgagctataggtggctgcctctcttctagaacagtgggcgtgaatgcatcagcaaatttttgcgcttcaccgtgtgctgttgataggcttacttgataaaagaaactgttgaatttaatatatgaagatgttttgaatgtgtaagaattgcatgaatagttagctcatattggagaaatttgcattcttcttgtgggctgggaacttcggatgttgagtatgttgcctttatttttagtgaatagcttcagactgcatttgatcaggttctatttttagctgcattagtgggaagtcaaattttttgcctcaatttctcactgcaccttttagtgtttataaagtggtctacggcctgttttcatggatttactacatgtaatttagatttgcaatttttcttttatagatgagcaaggcgggcatttaatttatgtttactataggctggaaaatagagcaagtatccacaaataaatacatcctttttttgtcatatactgagagcatgtctctctgtttatctaaaacccactccacggttcaacccaagtaaatgggttggataactatcgataaggacactctttcctggtttaaccctttaactgaccattttcgagaattcaaactgaaatatgtaagtaatatatttgttgttatgaattatgctatggattcaaacctgcttctaattgtagcatatatttgcaccatgtaatatctatttatcttgatgtgcttcttgatttcacttctaccttaaatgcttctcatagggaagttatgatttgatcatagctatcatctaactcttgcattccaaaaaagtataaactcctacttctaagtaataaccttatttattcctccttttccaatctttgtgttgtttagaaatcatgcgggtatcaagcatggtcaacgaccatggattcaacgattttgacaggcgtcgttatagaagtccgagtcccatgtcttcgccaattatgagacccaacctacatggcaatggatttgggccttggaatggcatacaccaagaggtatgtataatgaattaattactgaaaagtgcaaaaggaaaacaagcttttaattactacaagaatcttcttgtctatacatttactcattgttttcaacttctgattctgaagaaattttcttcaattgtatatagaaggtcatcaaaactctgtaccattgattcttatgttctttggctggcgtacattaggttgtgtctttgtgagcaatactaataagatttgtttatatgacagagattaggctttcctcctcctcctcctcctgggacaagtatggactggcaaggcgcaccgccaagtcatggctcttatattgtcaagaagattgtacgcatggaggttccagttgatgcttaccctaatgtatgtgttcctcttatgcgatttatcatccagcagataaaatgtcttgtttttaatgtctgctattttcgctttgctccagttcaatttcgtgggacgtattctaggaccgaggggtaattctctaaagcgggttgaagcatcaactggttgtcgtgttttcattagagggaagggttctatcaaagatgctgataaggtaacaaacgtttgtaaatgttaattactttacatttatatactcatataacatgcgttatataaattaaaactaagtattacagctagctaggatgataaacttctttgttatgtttaatttaatatcctttgtagaaatcttggaaatccttcattgtactcttccctgattagtaaatcctaactatccattattggtgtgaccatttctgccatggtctatagtatttctgaattctggtcttcaaacttcgtcctaaattgatctgaaacacgaagaaacatgggaaacacacaaaaagaactgtttaaaaaattgtttttatggagtattgtgtgcctcaaggcagattttatattgcctgctcatcagtttgcttaccatataaaccttgtaacaataataagttagtaacattgagtaacgtatttgcttacatgtattggacaaatgtattgttctagtatttcaattttctatttattttttgggttcatgatatatggtggtgagttttattgcatctttgtagaacatatgttagtattttgtactactatattcccatatgggtttctatcttgtcttctgggaatctgtcttgccccttaaacccattaacatgttacatcaataatgtgatagtactctgtctcatatattaatcttgattgctgaaagattccagattgctccttgtccatattttttcccctcatatatcctccaaatatacacagttacacatctttgttttctattttataggaggagaagctgaaaggaaaacctggctatgagcacctcaatgatccactgcatatcttgattgaagctgagttgccagccaatatcattgatacaagattgaggcaggcacaagaaataatggatgaactgctaaaaccagtggtattaatttatatgactttatgtattaatttattctgaaatttggataataccacttcacaatttagaatttagaaatgtgctaccataaagtctaccatacaggctaatggcacaaacttttcaccggttatgtttttttatcttttttttttttgcatgactgaactgaaaaggaattttacatctccatgcttattggagtagttacagctatttgcatctctgtggttttgttgacataaaatttagaggtaccaccccatacaagtcatggtaacttcacctctccctctcattcgcagcccagtggcagcacttttcattggtcctgatgtcctcattgttgcaactggttagtgtggtatgggtgcagatctaggctggagacagtcctcagcgctagtcgctaggacaggaatagtttcctttctctgattgtggttctgcatgtgaccctgtgggcatcaagagggccatatataatgaaataaaactgatatccagtaatattaattggagttaatgacccttaagatattcaatgatgatctaaattgtaaacttagtctactgccaatactatatctagagtgttgcagtacaaacttagtaaatctaccctttcaggaatataacattcaccatagtaacaaaacagatgcaacttgagggccaaaagagtactagtcagacctgcagctttcctcagctaagggcatgtttggttattttcctgggaaaatgagcagtgatctatgcgggaaaatgtctgtttccccacaaaaagagagaaagaaataggtctttggtacttgccaagaaagcacagaaatgaatcatgttgtatcaaatcataaaattaaaattaagtacaaaacaaagtttcttccataaatcccaagtcattacttccattccatgcttcattgttgtccataatgaatattttgttgctgcaaatcattgttaagtggatgcggtatgtctatacatctggcactgtggtactcatcgtcccaaattgcagtggatctgcaatgttaagtttatgatgaagggcccaaaggtgatgagaaggcaagggtttaagttttgggtgccagcccgaatcctgctaacctacagacttggctgctttccgtttcatacccctggaccatttttttgtttgtgtttcgaagcttatgcatatgatgccacagaactagcctttctcatgttgtctcacattgtagctttgctatttatttgagatattttccaacagctcttcttgagtagtaatttatttttatttcatatacaatgtttcttctccccctcacttattctttccctaagttgtcattctatgatagttattcctgcagtgtttttctgtgaaccatgttctgtaggttgcttacagctatgaccgccgttcatagctgacctcttttgttcgtctttgcaggatgagtcgcaagattactataaaagacaacagctgagggaactggcaatgctgaactctactctgagagaggacagtcctcatccaggaagcgtctcccctttcagcaatggtggcatgaaacgtgcaaaaccgagccattagcaaatatggttcgacctcaccgctttcatcaaggtcaaggagctcctacacggctatgcccctaggcatgccgtcgagcttgagtggttcgttgtatgggctattgtgtaaaaaacagtatgccttttactggatgattagtctggtaccaaatggttctctcctctggatgaggagatcgatggttaaagctgcctcaaatcttttggccggtccagatgtgttgttgtaacttgtaaggttcacattcattttgttctttatcgactgttaaccctgctagcttgtgatgctaagataggtggttttcccttttttcaggagagattagagaagtcttggtaatgtaagatttcagtttagaagttgagttagattgcatcatatttgcctgaacatcatggagttgcaaaatgcagatcatgaccgtgttatgcaatagtttgatgggaaaaatctttgaattaaccatg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0227400, RefSeq:Os07g0227400