Os07g0248800

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Revision as of 08:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0248800| Description = Conserved hypothetical protein| Version = NM_001065823.1 GI:115471378 GeneID:4342832| Length = 6810 bp| Definition ...")
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Gene Name

Os07g0248800

Description

Conserved hypothetical protein

Version

NM_001065823.1 GI:115471378 GeneID:4342832

Length

6810 bp

Definition

Oryza sativa Japonica Group Os07g0248800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8296989..8303798

Sequence Coding Region

8297244..8297267,8297728..8297939,8298327..8298449,8298763..8298817,8299940..8300077
,8300187..8300261,8300339..8300398,8301335..8301392,8301948..8302054
,8302484..8302558,8302643..8302838,8303566..8303678

Expression

GEO Profiles:Os07g0248800

Genome Context

<gbrowseImage1> name=NC_008400:8296989..8303798 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:8296989..8303798 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtctcctccttcgccctccgcatcacgcgcagtcgcagtcgagagatcaccggggttcggcttggagccctcctcctcctcctcctcgtcgtcgtcggccccctcaaggaatgagctgctgactatggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgcatcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgtggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaataataatatgaaaatgcatggccatgggttcaacgataacatggaagatccacctcctttttttgtgagaagatgggctcctatgcttgaaaagatcagcaatataaattcagctggagttgattgggagcgttcattctatttgaatttaattgctcacacatcatacactgttacagttgcaatatgcagtgtcagggatcttcgcagccgtgtagagaaaagcaaaccattatcaccagtttataaggtcacaaaaactgtgtatgcatccccaagccgtgtaaattttcatcttgatcgaagaaaggctgtggaaactgtacctgcatatcccaatatttgtttctcagttgatgacttcgatgatacttttgatgctgttgttttgtcagaccccgaacattgctattgtgtgattctcaatgcacatgatggggcagcttttcctgaagacactgaatcgaagaatgccagctcaaatctactaaacactgggagcaaccaagaaaaaccaccaaagagaacactcttctcaggctacgttagctaccaaaatgttcgagaagcctacaatgctggcagatcacaatttgggagcttactctcactcgggcatgaccaaactaaacttgataaactttatatgaggggccctgaaggacgtggggaagttgaagtagctgtttctggaattgcagatcagagccatgagagatcaaagaaagatccaggagatagctttcgagtctttgttcatagggcagcttctgctgcatcaaagctggcaaagcatgcctacgaggctgcatctaccaacaaacgatttgatcatgagcttctgcctctgaaatgttgcttgatgtcggtatctcttccttgggactacattgcacatgacctgctacacaaggaaacccctccgctggacctatga</cdnaseq>

Protein Sequence

<aaseq>MASPPSPSASRAVAVERSPGFGLEPSSSSSSSSSAPSRNELLTM VKKHSHLIGWTVVDAEDDASDVGMDDRFWHEMLDLFFVRGRVSKRREEDDLVFFVNNN MKMHGHGFNDNMEDPPPFFVRRWAPMLEKISNINSAGVDWERSFYLNLIAHTSYTVTV AICSVRDLRSRVEKSKPLSPVYKVTKTVYASPSRVNFHLDRRKAVETVPAYPNICFSV DDFDDTFDAVVLSDPEHCYCVILNAHDGAAFPEDTESKNASSNLLNTGSNQEKPPKRT LFSGYVSYQNVREAYNAGRSQFGSLLSLGHDQTKLDKLYMRGPEGRGEVEVAVSGIAD QSHERSKKDPGDSFRVFVHRAASAASKLAKHAYEAASTNKRFDHELLPLKCCLMSVSL PWDYIAHDLLHKETPPLDL</aaseq>

Gene Sequence

<dnaseqindica>6532..6555#5860..6071#5350..5472#4982..5036#3722..3859#3538..3612#3401..3460#2407..2464#1745..1851#1241..1315#961..1156#121..233#gcgggaggaagaagggaatctgattgcttccttcttccttcttcgattcagaatcactttgtttcttctttcttcttctatctatctatctacctgtggagacgagaggagaggaaatctatggcgtctcctccttcgccctccgcatcacgcgcagtcgcagtcgagagatcaccggggttcggcttggagccctcctcctcctcctcctcgtcgtcgtcggccccctcaaggtaatctctatccccatcctaattttggaccccaaccctcgcccccgcccccgcccccgcccccgcccgccaaggaaatttaattttattttcttattatatctctctctctcagctagctttgccccaagtaaccactaactcttttcaatctcactgtttcttctttcctactagttccgcacaaacttcaacttctctagctctacctcctcagatttctgcccaattcattcaaaagaattgcattatgtaaacaagaattgctagtacccatcgtaacgttggattttctatctaggtttacccgtgcctggcatcatattcatggggggagacaccctggacatacactaatctctgcaactcttaatctaacaccccactcgcattctgcactacaactgaacccatcacaacactaagctcaggttgcatgcttaaaccctgctcctgtcttctgtgcttcataagtgctcttcatcccctttctaattaaggaaaacatcactaagaggatcacccttgtcatttccgctcaaaaatatttttcttttcttttttttttcaacaaaaaaaaacactacttcaatcctccactgtaccacataccacccaacaattctggtcgattttgttttgagcctatctccattttctgtaaaagcatatgtccttatatccttttaagcacttctcaaccttttgtttctttttgtcttttcaggaatgagctgctgactatggtgaaaaaacattcccatttgattgggtggacagttgttgatgctgaagatgatgcatcagacgtgggaatggatgatcgattctggcatgaaatgcttgatcttttcttcgtgcgtggtagggtttcaaagaggagggaagaggatgacctcgtcttttttgttaataataatatggtaaacttccaatccttctcagttccccttattttagcttacagtgttatcttgtatgctaactgaggctcaatgctggtgcagaaaatgcatggccatgggttcaacgataacatggaagatccacctcctttttttgtgagaagatgggctcctatggtaaattaaccaagactatcttcgtcaatttcgatcatattaataaatgcatgcttccctttttggtagtagcttcaaggaaacttttcatatgacatactctttccttccattttagaatttttttctgtaatttcctgttgagttattcactttaaaactgtatcaagatgaactgcatcaactattacatattttttcgctcatgtttttttcccctatctatagcatttattattccttgcactagcactagtaagttttgtagtgtatttatggttgccacgatttgatagacttgaatatggtaaattgacttccataagctagtgtttggttcataacatactttctacagaaaagaagtctctgataatacatactaactcttggttttttatttgttctcctttgttttatgtggagcagcttgaaaagatcagcaatataaattcagctggagttgattgggagcgttcattctatttgaatttaattgctcacacatcatacactgttacagttgcaatatgcaggtacgtttctgccagttctgtcaagatattgcaagtttttatctagtatttatactgaatgattggcatgctgttatttatgtcaacaatgaaaagtttttggcatgctgttatttatgtcaacaatgaaaagtttatttggtgatgcacatcctcttgctggtcccaatctgtcagagtaaaacgttacctgtacttttggtctaagttcttatccttccttcactgtaatgcaacacagttgccacatgttgtctgtacttggtgtatgcttctattttctgtttcttgtagcagctgagaactggtctaggttagttcattaactcgcaacaagttagattgatgtactgtatctttcaatattactttggacttcggcctggcatcacagggagggagaagggggggggggggtggtggttctcacagatgtttgggttccaaccaataactattgttgtgcaacctgagcctgagagctcttgttgtatcatctttacctccttagttgatatatctggcaaagttagtttcttacaatctgctctacagtgtcagggatcttcgcagccgtgtagagaaaagcaaaccattatcaccagtttataaggtactgtacaagtaagcatttcacggcactccatcatttaccagtgaatcttattacataggtgcacagacttgtgttgtgtaaggttgagctttgtgtaatgactacttagaattcactatgattaatagtttcagaacattccacaatttctgctgttcaatgactgtaggaagtttcattatatcatggatgcttgtggaaaattggattttcttataactgactttatccagttatatcatgatgtcttagacttgttaatagaactacaaaattaatataagtttcaagcctaacatcttagaggtctatatcccaaaatgttgtagtttgaaactagtcgttattgctttattttctgtcgatctggacagcaattgcagaacacttttaaaccagacctggtcacatggccattttgctggttttcctgtaggaacactgttcgatgatggcaacattttaattttttcaacaaattgatttggaaaactgacagttatttgagttgtttacaagctaatataacctaatattttttcttatgcgtattatagcccaacagtaggcctggtcacttgattccttcctacagttagaaggcaaaggggtttcagttcaaatctccatgttaacaattcctttaaattttgttttttgcctgttttggggctaaacaatccagattgtgaacaagactggaacatgcttctgttgaggcacttctcagtgtgtttaagatcatttctaaagtgtacaactaaggtttcttttcttcctattcttgggtcgaaatgagcctgactagctgtccattttatttaacttcgacttctatatttcattgttgcaatactagttaccctagctaaagtttaacatgttttcggtattaagtaattatgtcttaaactcattgtcttattaaaacaggtcacaaaaactgtgtatgcatccccaagccgtgtaaattttcatcttgatcgaagaaaggtactttttcctggcattttcagtctctcttttgaaagagatgatgtttcagtaaaaattcctgtatctttggacaggctgtggaaactgtacctgcatatcccaatatttgtttctcagttgatgacttcgatgatacttttgatgctgttgtaagttcccatttctcagtattctagcatattgttcatatggatgtatctatgatattgcatcgcttttgtcattatagaatgaaagtgaccatctaaatttgagcaggttttgtcagaccccgaacattgctattgtgtgattctcaatgcacatgatggggcagcttttcctgaagacactgaatcgaagaatgccagctcaaatctactaaacactgggagcaaccaagaaaaaccaccaaaggtcctctgccctcaaatctaccaaaactctctctctctcagaattcagcacttagtaaattctccctgtgtctcaaactataggagcattctgattgtcccaaattatttcgccacctactccctcatctcaaccaatcaaaatcctctcttatttaatttgttcacttacattacatcatctcaaccacaactatcctccatttaattctatgtatttccttaatacctgtgcaacactctaaaggtggctatattttgggacgtagggagtatattctttatcactgttgcaattaaagatcagaagttttaatctgtttttgaaagacttatgtatagttaatctgcagtaatttcttgttttaattagtaattgaatgtcaaatccatcttatctgtgaaactgtgatcatgtatttaaaaccgtaagatatacttcctccgtttcacaatgtaagtcattctagcattttccacattcaaattgatgttaatgaatctagatatatatatatgtttagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtatctgagccccatcgtttggcctaaacagccaaagaataagccaaaatttgaatttttgaacttgattttgaagttgattttgagatgcttttaacataatttttgttagtgttggcttttaagtcgctacgaacaaatctataaaagttttacttataaattaatttttattttctaataagccattttggcttattaggcaaaatgggcaaccgatgggagcctcttgtagttgaacttttgttgttgacaaccgggaaattattgtgttcacactcacaacaatttgagagttcagaccccatactatcagtgtcacagtaagtaatattcattttgcacctcaaccttttctgctgctatagatatataataatttttaaagtagatacgtcctggttttcttcctactggcatcactcttgcttaaaacatagttacactttagcagatatccgcttctgtaacacaactgtatgaagtatatcatagttcatttctcacctacattgcgcttactgtgattattgcagagaacactcttctcaggctacgttagctaccaaaatgttcgagaagcctacaatggtgagtccatccatctatttatctccaaggaaactattgttcagatggtcttataaagtacttatgtcctttcaactttatctgcctggaaactattgtcatgttcgagaaacctattaagtatttatctttctgtcatttttttcttccaaagctaaactcaatagaatcatgtgttttttatgacactgcttttaactgcatcaacactttgctcaactagaggatttcctttttaaaaaatataaattagtaggtacctaccatttcattccttctaggtttacatttcctgatatgtactctgttatagctggcagatcacaatttgggagcttactctcactcgggcatgaccaaactaaacttgataaactttatatgaggggccctgaaggacgtggggaagttgaagtagctgtttctggaattgcaggtcagttatgtttagcctaagtagcgatttactgcgtgggttgactctggaatatgtttcacaagcttcaagttatctcgctgttacatgcatttactgtaatgagtaggatttggggctcagataaaatcgtgatgcacatctgactatggtaaactactctcatatctttattactgttgattgttctaccagtggccactttttgttgcaatgcgtttgcatttagcatttgctatgttaaatgatacaatattaaagtgcttacaaatatcctttctgtacaaccccccaacatgcacattcatgtcttggattaccgtagctgtgatgatgcaagttgttgatccgtcaaactctgacatggaaatgattgtcttttattagatcagagccatgagagatcaaagaaagatccaggagatagctttcgagtctttgttcatagggcagcttctgctgcatcaaagctggcaaagcatgcctacgaggctgcatctaccaacaaacgatttgatcatgagcttctgcctctgaaatgttgcttgatgtcggtatctcttccttgggactacattgcacatgacctgctacacaaggtgaaaaccatcactacttgcaaatgatatgattgttttgatgtctaaaattatttttttgaactgaaatgtctaaaattgttgataactattttcattttcctgcttattttttagtcacagattaccgagtattggctgttgtcaaacaatatagtccacgtgtaaagttgttgataactagtttcattttcttggttatttttatttgtcgcaattatcgtctatgtgctttgatgaaattaatttggttacgttagtccatacatctagaggatgttttcatggacatccttcattttcatggttccatgtgtggaataaatgtagaccttcaaaacataagttatattggctgaataataagtgggctagtttctcaattttgaatgcaatccacttgacagaatagttcaagttgagtatatctagcttacaatatgatcacgctatgtaacaggaaacccctccgctggacctatgagagactgcgaattcccattgtgcaccagaaagaatgatatatgtgcatgattgtgggaaagtttgtgtcccttgggctcgatatagtgtaagaaaacagtgagcagagaagcagtgctgcgatgtacatgtgtactttaaacagactaaaacttgtagaattttcatgtgtgtttgtacaatgttgaaagtaggcgatgaaataatgtaaatatatatttttttggttgtcatgaggaagactcttcactgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0248800, RefSeq:Os07g0248800