Os07g0259700

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Revision as of 08:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0259700| Description = Similar to PRLI-interacting factor G (Fragment)| Version = NM_001065856.1 GI:115471444 GeneID:4342868| Length = 3129...")
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Gene Name

Os07g0259700

Description

Similar to PRLI-interacting factor G (Fragment)

Version

NM_001065856.1 GI:115471444 GeneID:4342868

Length

3129 bp

Definition

Oryza sativa Japonica Group Os07g0259700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9068252..9071380

Sequence Coding Region

9068429..9069355,9070472..9071239

Expression

GEO Profiles:Os07g0259700

Genome Context

<gbrowseImage1> name=NC_008400:9068252..9071380 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:9068252..9071380 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggcggcggggctcagcgccaccaccgcgggcggcgccgaggtgcggcggggtccgccgcgcgaacgccccggggctggtgctgctccttcgctggcgtcccgcagagccccgacctccgccccttccctccctccctcgcgccgccggccacggcggcgtcttcctccccggcgccgggtggtggtgccgggaggaataagctgccgcccaagtccccctcgatctcgtcgttccacagctcgccgacgtcgtcgaggctcgccggcctcggcggcctcatcgacccgcgccgcatcctctcccccggccgcgtctcgcccatcgacctcgatgactccgcgcccccgctcccgctcccgctcccgctcccgccgccgccggtgacgcccgcggcggagacggtggtggtcccggcggagacgtcggcggcggtggcgccgttggtggtggcgtcggcggaggcggatgcggcgggcgacgaggcgctggatctgaggcttttccttcgcgggagggacgggagtacgtgcgtggtgatggagctcgactccggggtgctctgcgacagcagcgccttcttcgccgccatggcgccgccgcgcgggcccgccggtgacggaggagggagcggcaggaggatcgaggtggacggggtggacaatgtggaggcgttccgcgccgccgtcgagctcatgtaccagcctgatccgctgcggtggctcgccgccgctggcgtgtcgcgctccattgatgtgctcgaggtgtcttcatcaatcatgtttgaaagaggagttaaattgtgtttgtcatacatagaagcagttccatggaatgagaacgaggaggagaagctcaagaatctctttgcaagatgtacttttgatgaagcaatatcccaagatgttctggctagattgcggcctcacagctggagcagctcagaagacctcacagtgcatcttatccaatcagtcacgagcagcaccaacagtggtgcaagaaaagatatgcaatctttggtaaatggccttctaagcaaaagttctgtctaccaaaaagacatggcagggctaaacagagagagcctgtataatatctgttatgcctgtttaaattcactagtggatctttatgacgaagcaacagaggctacaaaccacactgctcaagcattagttatcaagggcagtaaaccatttattgagagaatctctcagcagacagagaacctcaactggctcttggacattcttgtgaatattgacatggctgaagagtttgtggagctgtgggcaaagcaagacaggctcatcaggatacatgagcaggcatcacccatgatgaggtatgaactaagccgaatatctgctagtgttttcatcgcactcggcaaaggaaaagttcagtgccgtggagagctgaggagcctcctcttctacggatggttcagcccgatgttgcttgatttcggctggcttcagcgatgctccaaaggtctggatgtaagatctttggaggaaaatctaggacaggccctactaaccctcccactcaagcagcagcagtgtctatttgaggagtggtttcagtgttttgcatccaaaggatcagagtgcccgaaccttactagagctttccaggtatggtggagaaggtccttcgttagatcatcggtagaaggtcagtga</cdnaseq>

Protein Sequence

<aaseq>MEGGGAQRHHRGRRRGAAGSAARTPRGWCCSFAGVPQSPDLRPF PPSLAPPATAASSSPAPGGGAGRNKLPPKSPSISSFHSSPTSSRLAGLGGLIDPRRIL SPGRVSPIDLDDSAPPLPLPLPLPPPPVTPAAETVVVPAETSAAVAPLVVASAEADAA GDEALDLRLFLRGRDGSTCVVMELDSGVLCDSSAFFAAMAPPRGPAGDGGGSGRRIEV DGVDNVEAFRAAVELMYQPDPLRWLAAAGVSRSIDVLEVSSSIMFERGVKLCLSYIEA VPWNENEEEKLKNLFARCTFDEAISQDVLARLRPHSWSSSEDLTVHLIQSVTSSTNSG ARKDMQSLVNGLLSKSSVYQKDMAGLNRESLYNICYACLNSLVDLYDEATEATNHTAQ ALVIKGSKPFIERISQQTENLNWLLDILVNIDMAEEFVELWAKQDRLIRIHEQASPMM RYELSRISASVFIALGKGKVQCRGELRSLLFYGWFSPMLLDFGWLQRCSKGLDVRSLE ENLGQALLTLPLKQQQCLFEEWFQCFASKGSECPNLTRAFQVWWRRSFVRSSVEGQ</aaseq>

Gene Sequence

<dnaseqindica>2026..2952#142..909#gtcccgtgttgttccactcatcacacctctccctcctcccctctcatggccgccgcctccgaaccctagctctctctctctctctctctctctctctctctctctcgcgccccacccagatctgcgccggcgacggcaaggatggaaggcggcggggctcagcgccaccaccgcgggcggcgccgaggtgcggcggggtccgccgcgcgaacgccccggggctggtgctgctccttcgctggcgtcccgcagagccccgacctccgccccttccctccctccctcgcgccgccggccacggcggcgtcttcctccccggcgccgggtggtggtgccgggaggaataagctgccgcccaagtccccctcgatctcgtcgttccacagctcgccgacgtcgtcgaggctcgccggcctcggcggcctcatcgacccgcgccgcatcctctcccccggccgcgtctcgcccatcgacctcgatgactccgcgcccccgctcccgctcccgctcccgctcccgccgccgccggtgacgcccgcggcggagacggtggtggtcccggcggagacgtcggcggcggtggcgccgttggtggtggcgtcggcggaggcggatgcggcgggcgacgaggcgctggatctgaggcttttccttcgcgggagggacgggagtacgtgcgtggtgatggagctcgactccggggtgctctgcgacagcagcgccttcttcgccgccatggcgccgccgcgcgggcccgccggtgacggaggagggagcggcaggaggatcgaggtggacggggtggacaatgtggaggcgttccgcgccgccgtcgagctcatgtaccagcctgatccgctgcggtggctcgccgccgctggcgtgtcgcgctccattgatgtgctcgaggtgagggaaacgaattaagcttaagcagcttctcttaattgattttgtgttactagtagcatgatgtggttgcaaaagaagtagtactacttgcaataatggatggcattttgttacccacaacagggcaggaaatttagtgggcattgcaaccaaacaatcattcacggtacattgatgttgtgttccttatatgttcattttccgaagccattttggtggtagatatccagtgtggtgttaccaaaatactcattttcacatttttttttgataggcgcacaagttagagccccagcgtttgcctttcagcttataagccactgccaaaatttaatttggaaacttaatttttgaattgattatgaggtttttttcattgtagtttatgtttccagcattggcttttaaatcgctaactagttcacatatataaagttttacgaacggaatattttttgatcgctgataagccgttacggcttataatcagcatatgccaaacaacgatagctctagcattcgagtgaaactaatatgatatgattgtgtgagaagcatttgacctgggatattagtgatttaatatcatctaatgcttttattaaaccattgctttcatgtaagttatgcaaagtgatatgtaagtatataattataaccatattagatgttgtagatcactcactttctatgtgaattgtttgcatgctggtattgtttgtttaatatgttaaatcatggattagataataatacaatcactataagtcttgtaaccatacacattctatggcttgatgtccattagatcacattctacagctatgaaagtcagctacaaatgcatttagtggtttgaatgcatctaggcccgcaattaaaagcaagtattcctgttgcccataattgctatctagtgatccaaataaagcagccaccattgctgtccaatatctttgtaacatcttttcaattctagcatgtatatttctcaagtggggatttacagaataatatgttattaaatgcttctttcttgcattggtaatgagtttattaaatgccaactaattaatcacgtacataatttgtttattaatgctttaattgcaggtgtcttcatcaatcatgtttgaaagaggagttaaattgtgtttgtcatacatagaagcagttccatggaatgagaacgaggaggagaagctcaagaatctctttgcaagatgtacttttgatgaagcaatatcccaagatgttctggctagattgcggcctcacagctggagcagctcagaagacctcacagtgcatcttatccaatcagtcacgagcagcaccaacagtggtgcaagaaaagatatgcaatctttggtaaatggccttctaagcaaaagttctgtctaccaaaaagacatggcagggctaaacagagagagcctgtataatatctgttatgcctgtttaaattcactagtggatctttatgacgaagcaacagaggctacaaaccacactgctcaagcattagttatcaagggcagtaaaccatttattgagagaatctctcagcagacagagaacctcaactggctcttggacattcttgtgaatattgacatggctgaagagtttgtggagctgtgggcaaagcaagacaggctcatcaggatacatgagcaggcatcacccatgatgaggtatgaactaagccgaatatctgctagtgttttcatcgcactcggcaaaggaaaagttcagtgccgtggagagctgaggagcctcctcttctacggatggttcagcccgatgttgcttgatttcggctggcttcagcgatgctccaaaggtctggatgtaagatctttggaggaaaatctaggacaggccctactaaccctcccactcaagcagcagcagtgtctatttgaggagtggtttcagtgttttgcatccaaaggatcagagtgcccgaaccttactagagctttccaggtatggtggagaaggtccttcgttagatcatcggtagaaggtcagtgataatgtttttactactagtatatgctgtctgtaccacttgtaaaattgcaattgttggaataactagtaggggtgatcaggtgaatgatgtctaccgtagtttagccctttcgattgtatgtgcataagcttgttaaatttattttgaggaatggatggctttggtgtgtgtatgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0259700, RefSeq:Os07g0259700