Os07g0260000

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Revision as of 08:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0260000| Description = Protein prenyltransferase domain containing protein| Version = NM_001065857.1 GI:115471446 GeneID:4342870| Length = ...")
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Gene Name

Os07g0260000

Description

Protein prenyltransferase domain containing protein

Version

NM_001065857.1 GI:115471446 GeneID:4342870

Length

5935 bp

Definition

Oryza sativa Japonica Group Os07g0260000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9104013..9109947

Sequence Coding Region

9104013..9104138,9104293..9104467,9105134..9105183,9105271..9105297,9107490..9107535
,9107679..9107734,9108070..9108365,9108471..9109947

Expression

GEO Profiles:Os07g0260000

Genome Context

<gbrowseImage1> name=NC_008400:9104013..9109947 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:9104013..9109947 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcaagcgctgctccgaatcctccgaaccctcggctccaccgcccacctcacgcaggcccacgcccgtctcctcgccgccggcctcgccgccagcccgcgcctcctcccggcgctcgtcgccgcggccttctccgcccactcccctcgctacgccgccgccgcgctccgcgccgccggccccgccgcctccaccgtctcccacaacaccctcgtcgagcgcctcgccggggccaggccgcgcggccgccgccccgcccccgcacccgcccccgccgatgccctcgccgcctacgccgccatgcgcgcccagggcgtcccgcccaacgggttcaccttcaccttcctgctccgggcgtgcgcgctcctggggctcccgcggccgtgcggctgcgtccatggccagatcgtcaggtgcgggttcgggagcgacgttttcgtccagaacgcgctcatggatgtgtaccacaggtgcggtggcggtggcggtggcggtgttggggccgctcggcaggtgttcgacgaaatggttgacagggatgtggtctcgtggaactccattgttggggtgtacatgtcgagtggggacgctacgggagcaatggggttcttcgaggcgatgcctgagaggaatgttgtctcctggaacactgttgttgccgggtttgcaaggatgggtgacatggtgacagcgcgggctgtgtttgacaggatgccttctaggaatgccgtttcttggaatttgatgatttcgggttatgcgatgagtggtgatgtggaggctgcacgttccgtgtttgatcggatggaccaaaaggatgtggtttcgtggactgctatggtttctgcttatgccaagattggggatctagatacagtgaatgagttgttcgatcatatgcctgtgaagaacctggtttcatggaatgcaatgataactggatacaatcacaactcgcgatacgatgaggcattgcgcacatttcagctgatgatgcttgaaggacggttcagacctgatgaggcgacattagtgagtgttgtctcggcatgtgctcaattgggcagtgttgaatactgcaactggatcagttctttcattggtaaaagcaacatccatctcactgttgcactaggaaatgctctcatagacatgtttgcaaagtgtggggatgtaggaagggcagagtcaattttttataaaatggaaacaagatgtatcattacatggacaacaatgatttctggctttgcttttaatggtctttgtagagacgctcttttggtctacaataatatgtgcagagaaggagttcaactggatgacacagtttttattgctgcactcgctgcttgcgctcatggaggtttgttgcaagaaggttggagtatatttaatgaaatggttgagcgatataacattcaaccaagaatggagcactatgggtgcatggtggatttacttggtcgagcagagcttatagaatatgtcagtaagaagataactgaactagaaccatttaattctagttatcaagtcctggtttctaattgtagtgctttggaaggaaggtgggatggtgtgatcgatgcacgcacaagcatgcgtaattggggaattgagaaagtgcctggaagtagctcaatccaggtaggcagtgaggttcatgagtttttggctaaagatacaaggcataagaggaggaaagagatatatgaaacagttgacggtttaatggccctcatgagacatacagagcaagcacattgggacctttttgtggctaggtactggggctattcaatgcttgatagggcaacaactgttaacatgggtaaaggggatcttcctattgttctacaactgtatcaggaagatcatcgaagttttgatcaccaggctgctgtccgaggattaaaactaatcagtccttcaaattcgtgccagcgctgggagcaaggacaaccattggacaaattggtggtcacaactcacaagagccatcatcatcctggggtttatagaaaccagagatctccacacaaagcattgatcagaagtatactggcctactgggataccagaaacacatggaaccattttcaccttgtgcattcagagacctgtcccgccctgtctcccctgctccccaaagctggagcagggggaatgaagctgggcgattgttgcttggaggggccgaggattcgctggtggctcaattatcctggagttcattctgaaatctga</cdnaseq>

Protein Sequence

<aaseq>MEQALLRILRTLGSTAHLTQAHARLLAAGLAASPRLLPALVAAA FSAHSPRYAAAALRAAGPAASTVSHNTLVERLAGARPRGRRPAPAPAPADALAAYAAM RAQGVPPNGFTFTFLLRACALLGLPRPCGCVHGQIVRCGFGSDVFVQNALMDVYHRCG GGGGGGVGAARQVFDEMVDRDVVSWNSIVGVYMSSGDATGAMGFFEAMPERNVVSWNT VVAGFARMGDMVTARAVFDRMPSRNAVSWNLMISGYAMSGDVEAARSVFDRMDQKDVV SWTAMVSAYAKIGDLDTVNELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMML EGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHLTVALGNALIDMFAKCGD VGRAESIFYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMCREGVQLDDTVFIAAL AACAHGGLLQEGWSIFNEMVERYNIQPRMEHYGCMVDLLGRAELIEYVSKKITELEPF NSSYQVLVSNCSALEGRWDGVIDARTSMRNWGIEKVPGSSSIQVGSEVHEFLAKDTRH KRRKEIYETVDGLMALMRHTEQAHWDLFVARYWGYSMLDRATTVNMGKGDLPIVLQLY QEDHRSFDHQAAVRGLKLISPSNSCQRWEQGQPLDKLVVTTHKSHHHPGVYRNQRSPH KALIRSILAYWDTRNTWNHFHLVHSETCPALSPLLPKAGAGGMKLGDCCLEGPRIRWW LNYPGVHSEI</aaseq>

Gene Sequence

<dnaseqindica>5810..5935#5481..5655#4765..4814#4651..4677#2413..2458#2214..2269#1583..1878#1..1477#atggagcaagcgctgctccgaatcctccgaaccctcggctccaccgcccacctcacgcaggcccacgcccgtctcctcgccgccggcctcgccgccagcccgcgcctcctcccggcgctcgtcgccgcggccttctccgcccactcccctcgctacgccgccgccgcgctccgcgccgccggccccgccgcctccaccgtctcccacaacaccctcgtcgagcgcctcgccggggccaggccgcgcggccgccgccccgcccccgcacccgcccccgccgatgccctcgccgcctacgccgccatgcgcgcccagggcgtcccgcccaacgggttcaccttcaccttcctgctccgggcgtgcgcgctcctggggctcccgcggccgtgcggctgcgtccatggccagatcgtcaggtgcgggttcgggagcgacgttttcgtccagaacgcgctcatggatgtgtaccacaggtgcggtggcggtggcggtggcggtgttggggccgctcggcaggtgttcgacgaaatggttgacagggatgtggtctcgtggaactccattgttggggtgtacatgtcgagtggggacgctacgggagcaatggggttcttcgaggcgatgcctgagaggaatgttgtctcctggaacactgttgttgccgggtttgcaaggatgggtgacatggtgacagcgcgggctgtgtttgacaggatgccttctaggaatgccgtttcttggaatttgatgatttcgggttatgcgatgagtggtgatgtggaggctgcacgttccgtgtttgatcggatggaccaaaaggatgtggtttcgtggactgctatggtttctgcttatgccaagattggggatctagatacagtgaatgagttgttcgatcatatgcctgtgaagaacctggtttcatggaatgcaatgataactggatacaatcacaactcgcgatacgatgaggcattgcgcacatttcagctgatgatgcttgaaggacggttcagacctgatgaggcgacattagtgagtgttgtctcggcatgtgctcaattgggcagtgttgaatactgcaactggatcagttctttcattggtaaaagcaacatccatctcactgttgcactaggaaatgctctcatagacatgtttgcaaagtgtggggatgtaggaagggcagagtcaattttttataaaatggaaacaagatgtatcattacatggacaacaatgatttctggctttgcttttaatggtctttgtagagacgctcttttggtctacaataatatgtgcagagaaggagttcaactggatgacacagtttttattgctgcactcgctgcttgcgctcatggaggtttgttgcaagaaggttggagtatatttaatgaaatggttgagcgatataacattcaaccaagaatggagcactatgggtgcatggtggatttacttggtcgagcaggtaacttacaggaggcgattttatttattgaaagcatgcctcttgaacctagtgttgtcatatgggtcacgttgctttgttcttgtgttgcacatggtaatgcagagcttatagaatatgtcagtaagaagataactgaactagaaccatttaattctagttatcaagtcctggtttctaattgtagtgctttggaaggaaggtgggatggtgtgatcgatgcacgcacaagcatgcgtaattggggaattgagaaagtgcctggaagtagctcaatccaggtaggcagtgaggttcatgagtttttggctaaagatacaaggcataagaggaggaaagagatatatgaaacagttgacggtttaatggccctcatgagacatacagagcaagcacattgggtaagataatgtagaacactgcagcatcagaagtgcttagttgagtgttgctcgtcctacatgtgcaaaataaatactagattaccatttgaacaggatggactggtaagttgtatagcagagagagagagagagagagagagagagagagagatcagcagttgatgatttgattgaatgcatgaatcatagaggacaccccctttgattgcttaaagaaattgcacaccgcttaactattgaagatcttgcctgcttgtctgtcttgtgcagctcatgtgtaaaggttgagagttgggaccctaggaccttatgtccttgagtccttgtggcaggacctttttgtggctaggtactggggctattcaatgcttgatagggcaacaactgtgtaagatacagctagtttttgctgacattgcttcactgtgattatgggagaagttaatcgctggagtgctcttttacagccgttttccaagtgtaactgaaaaagtctaattcagttcatcaggtgttgtgaataatctgcagtaacatgggtaaaggggatcttcctattgttctacaactgtatcaggtttgctaataatcttctttctggatcaaactggagagcatcacttttggtaaatagaaggcagagagttttgctgcaattggcatgaaccaagctctggttctgtcaccactcaccaggagcaaatagctgcgtactatctcagatataagtagacgtcacttattctctgggcagttgagtcttctttactatcaatgcatatttgaggaagctgctttagctagcagcagaagtgctccatacggtctttttgggtgatcaccccaacccattgcattttgattaatctggtgaatcatattgagatcctgtcttcaaactactgaaatcacaaattgggagcacacgacttatctgtttctttgactagcatggcatatttgttacaaatagtaagtatagaaatttctttcccagttttatgtgttgtacattattctcaaacatcttatttgaaagaagaacacttttcaatattagtacactggtaagtgcaactggttttaggcctttacatagttttctgatcttacttcaattttagcttctagcaatcttgactttggctgaggaacatagctgcaagcaacttgcagctaggaaactaggatgggattgggttgatacttgatagaaatccattagccacttcgatttattttgttaaaatttgagtttttgttattctcttgttggcgctatacggttcaaaatcgctgaatcatgttccatctattgcctggctatttcaaggtgcattggcctttacaccacatgtcatcatgacagcaacaaccagttaataaatgccctactggcagtttatagttctggaccatgctgattacatagctgccagtctgtgaccttcatctagatcaatagtcgtatatgttcaatcctcttccatctattatgaatttatgatatggtaaattttttttcaccaagcttgtttacaaggtaaaatttttctgctcttattttgttacaagcatgaatgtaaaattaatagtgaactaccatccatttaaagaagaaatttctttttcaagaaacaaaacctccactgagaatttgcattgcaggcagaagttgctgtgctcatgtcaagatgtagttttacagtgacaactcataccaggatgaacttcacatttgattgtggtgtgttccgcttcttcctcagtacagacatactgtctgactgtctcctgggtcattagagctataggaacatacattttttcttaatgatatatgggtactttgtgttgtctgatttctcatattttcactgtggaaatttatctttagttttggctggattattcagcaaattttatgcttgagtactcattgtcgacttgaacactatttatgattgaattaaattaagacaacaaattacctggatttacagtagtgattctcttctgtaatacatttaggagatatttgttgtggagaataaaaaaagagcagggacacgaatgttaagtgcaaaatcttataataatttccatgtgaatataagacaacattggagtgataaattgattgaattttttatatatgctactgaaagttgtcattagcaaagagaatatttgttgtttatttatgtctgaggttaagcagcattacccaaagagatgatattgatatggaaaatcacaaaatagatgaagataatatgacatagaaagctgatggacactctggactctatttctcaggaatttccctgatttagggaattgaactttttcctgtaaaattcgtttaatgccgtgtgctccatttcatcatttttcctatctttacctttttattaccctaatgtttacagtgtcaaggttattctttaacaaaaaggacacctaatgctaagagatgactaagtgaccaattaatttatgaagtactagtagaagtctaaccgatctaattttgaatcttcatgttgtccgatgaggctttcctgacattttaattcacattctgtaagactgtgacatgcttttgcattctttgaacttttgtaaggaagggtgtgaacaaattttgaaacatcagttcaggacttcttttttcaaggctaatctcaagatattgttgctttagtttatagagactagaagatctgattggcttatattgtaacttttctgttttccatcattcaggaagatcatcgaagttttgatcaccaggtcattctgactctccagcccttctttcctttttacctttgtcactccaatcatgactcatgataagttattttaatttgctttcaggctgctgtccgaggattaaaactaatcagtccttcaaattcgtgccagcggtaattttgtgcttcctgactcctgagttggatgatttcacatatctagtacttttttttttatgattttaaagatctccaggtcgatagcatcacattactgaaacacaaggaaatcataggtttaggcatatcaaaaacctaggtactacagcataacttggagtctagtttggtccaaaagaatattatttatttgcattttttgcatacattagattctcctctgtggaagccttatctgcatcacatttatctgacatgcaatttgatgccatctattatgcttcccgtacaaaacttttactactttaagaatacccgatgttgtatcagtggacaaactattgtgaggaaatcgatcgcataactggtccttctctttactatctagtaggagtatttgcaacttacaccttatctgctagtaaagtgaatgctcagtgttccagttgattttgatattcccaactgaaataagcagtcctattgttgtcgatattttcattcaatagtaataataatataattattgccccttgaaccataaatactggtaaaatacatgctggaacttggaagtatcgcacagagctcaattattcgtagtactacagtactgggttctcaactaattgactactttctcatgctcttcatgtgcagctgggagcaaggacaaccattggacaaattggtggtcacaactcacaagagccatcatcatcctggggtttatagaaaccagagatctccacacaaagcattgatcagaagtatactggcctactgggataccagaaacacatggaaccattttcaccttgtgcattcagagaccgtgagttattctgccacgcaatcgcaagcgaaaaatgggcgattcttccatgtgagcattcatggccctgccaggggttctaggacaccaagaggacgttccttgttcatcttttgctcagcatggactaatgcaatttcattttctgttccagtgtcccgccctgtctcccctgctccccaaagctggagcagggggaatgaagctgggcgattgttgcttggaggggccgaggattcgctggtggctcaattatcctggagttcattctgaaatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0260000, RefSeq:Os07g0260000