Os07g0272400

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Revision as of 08:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0272400| Description = Protein of unknown function DUF500 family protein| Version = NM_001065883.1 GI:115471498 GeneID:4342899| Length = 37...")
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Gene Name

Os07g0272400

Description

Protein of unknown function DUF500 family protein

Version

NM_001065883.1 GI:115471498 GeneID:4342899

Length

3796 bp

Definition

Oryza sativa Japonica Group Os07g0272400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:10096364..10100159

Sequence Coding Region

10097038..10097949,10098074..10098274,10098796..10098991,10099697..10099881

Expression

GEO Profiles:Os07g0272400

Genome Context

<gbrowseImage1> name=NC_008400:10096364..10100159 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:10096364..10100159 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccatggcgacctcgcgagaggttttcaagtatcaccctttgcctacaccgggagtggaaaacagttttaaggatgagatccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtcattcccacagcatgtagaaggagcactgggaacagctggaaacatcatcaattcctttgagtcaaaattggctgagcacaagcaatttgattttggtggcaaaaccaatttttatggctatgattgtgcggacgatggttggggatctgcacccttgaaggcagataagccggtaaaccttagaaatctgctgggtggtttaattgcaatcatcagtcgtggcggcaaaaattctgaaattcaaccgccaaaggacactaagtctagtgtcgcattcttagggtcaggtagcgatggagaaacattcttgcacgcctcagtctatgtgccaagtgctccaccattgcttgacgaagaagctctgaattacaatgtgtatagggttgtgattgaagcagaaccaccagaatggttacctgatagttatgctaactcatgcatgcaatgcgctgcttcttttactgttgttactcgtggaaggcatcattgtcgattttgtggagggatattttgtaggacatgctcaaaaggcagatgtctgttgccagccaagttccgtgagcggaatccgcaaagggtttgtgatgcttgttatgataggcttgatccgttgcagaacttattcattaattctattagcaatgccacacagactgcaaagcatgatgttatggattggactagtaccagggggtggttgaatttgcctattggattaacaatggaacatgagatttacaaggccgcaaattctgtgaggagctatagccagattgcaaggctaaaccccgaaaggtctattcctcatgcagtccttagtggagcaagtgggcttgctatcctgacagttgtaaaagctggtgcacttcttacatacaaacttggaactggcctagtagttgctcgaagatcagatggatcttggtcaccaccatcagcaatcgtttcagttgggttaggatggggagcacaggttggtgctgagctaatggatttcatcatagtgcttcgtggtctggaagctgtcaggacttttagcagccagatgcatttttctgttggggcaggtttaagtgctgcagcagggcctgttggtagagtgctagaggctgacttgagagctggtgataaaggctcaggtgtttgttatacatatagctgcagcaaaggtgcattcattggtgtttcgttggaagggaacttcgttgcaacccgaagggacgcaaatctgcggttttacggcgacccgtatctgacaaccagcgatattctcatgggggatatgcagagaccaaatgctgccaagtttctgtacacagcgttggatggcctgtactctgggctgagtcgttag</cdnaseq>

Protein Sequence

<aaseq>MTMATSREVFKYHPLPTPGVENSFKDEIQSKVLGTIGDVMNSFD PKSFPQHVEGALGTAGNIINSFESKLAEHKQFDFGGKTNFYGYDCADDGWGSAPLKAD KPVNLRNLLGGLIAIISRGGKNSEIQPPKDTKSSVAFLGSGSDGETFLHASVYVPSAP PLLDEEALNYNVYRVVIEAEPPEWLPDSYANSCMQCAASFTVVTRGRHHCRFCGGIFC RTCSKGRCLLPAKFRERNPQRVCDACYDRLDPLQNLFINSISNATQTAKHDVMDWTST RGWLNLPIGLTMEHEIYKAANSVRSYSQIARLNPERSIPHAVLSGASGLAILTVVKAG ALLTYKLGTGLVVARRSDGSWSPPSAIVSVGLGWGAQVGAELMDFIIVLRGLEAVRTF SSQMHFSVGAGLSAAAGPVGRVLEADLRAGDKGSGVCYTYSCSKGAFIGVSLEGNFVA TRRDANLRFYGDPYLTTSDILMGDMQRPNAAKFLYTALDGLYSGLSR</aaseq>

Gene Sequence

<dnaseqindica>675..1586#1711..1911#2433..2628#3334..3518#ggttgggcttaaacaacaagcgagccttcgcacgccttcgttggccgatcgatctccccgtggacggacggagggacccacccatccacgtcgccgctattttcgcggcgcgcgcgccgccgatctccgatcaccggcggctgggtgcgagccccgcaaccgcaaggcgtccctgctgctactcccgcccgcatcctccctgcgcccaactccaatctcttctccgcctccaactccaggaggtcgctctcctcctcgctaatttcgcccgcctccgccgatttcctcggggggaggggagcagcggtaggtgccgtacgtctccggtgagctcccgtgccgacgcgcatcctctttctttcgatttcgccttagcctgtaataacatgtagatctggaacctaggtttttctctttttcttaatatatagaagtatatatatatataaaaaaaaaactgtgggttcaaccagaggtatccccatgcccacgttaggttcaaccctgttcgcagaatacgtggaaattttgtgtacagctgagattgttttgttctgaatatgagtagttattaccatttggttgttatttagataaattgtattccagcatattttgattattttctcttttcgtgttttactctttcagtaacttttgtgtggtagtaatttatgaccatggcgacctcgcgagaggttttcaagtatcaccctttgcctacaccgggagtggaaaacagttttaaggatgagatccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtcattcccacagcatgtagaaggagcactgggaacagctggaaacatcatcaattcctttgagtcaaaattggctgagcacaagcaatttgattttggtggcaaaaccaatttttatggctatgattgtgcggacgatggttggggatctgcacccttgaaggcagataagccggtaaaccttagaaatctgctgggtggtttaattgcaatcatcagtcgtggcggcaaaaattctgaaattcaaccgccaaaggacactaagtctagtgtcgcattcttagggtcaggtagcgatggagaaacattcttgcacgcctcagtctatgtgccaagtgctccaccattgcttgacgaagaagctctgaattacaatgtgtatagggttgtgattgaagcagaaccaccagaatggttacctgatagttatgctaactcatgcatgcaatgcgctgcttcttttactgttgttactcgtggaaggcatcattgtcgattttgtggagggatattttgtaggacatgctcaaaaggcagatgtctgttgccagccaagttccgtgagcggaatccgcaaagggtttgtgatgcttgttatgataggcttgatccgttgcagaacttattcattaattctattagcaatgccacacagactgcaaagcatgatgttatggattggactagtaccagggggtggttgaatttgcctattggattaacaatggaacatgagatttacaaggccgcaaattctgtgaggagctatagccaggtttgaggttactgattttgatttcttatcgcctccttacatatttaatcgccactctcatacatgtttaattgcaatatttaggatatacccctactaatgaatcatacaaattttaatgcagattgcaaggctaaaccccgaaaggtctattcctcatgcagtccttagtggagcaagtgggcttgctatcctgacagttgtaaaagctggtgcacttcttacatacaaacttggaactggcctagtagttgctcgaagatcagatggatcttggtcaccaccatcagcaatcgtttcagttgggttaggatggggagcacaggtattaactacattgctaatttcatctctgtctttgatatggacaatttgttgtccatcaatttatgaaatgcgttttttttgtgttgttacacttaatacagtttgcttaattgctctagctttccttgtggtgtagaaattatccacatgcattgcccattatttgtctttgggtaaaaaagtaatgtaatggacattttttgtatttcctgatggaaaatagtacagagtgtgcatgcctgcacaagagctcgtaatatttaagtgcttgttgtggcactcaatttacctttaggtaaaaatagtttttttttggatatgaacatcaggaggaaactgcttccttttgttgtgaatgttacgtgattactggcattaacaaacgaaattatgttttatgtttacttgatgagtaaaaatatgttaatatgatttcagccataattcaggaggtttcctaatatttactttttacatgttatactcttgtatgttgtattcttatgtttgatcatacaggttggtgctgagctaatggatttcatcatagtgcttcgtggtctggaagctgtcaggacttttagcagccagatgcatttttctgttggggcaggtttaagtgctgcagcagggcctgttggtagagtgctagaggctgacttgagagctggtgataaaggctcaggtgtttgttatacatatagctgcagcaaaggtaatctttccatctgatcgtagttcttaagcctccctagttgcattgaagtcagtctctgtttctattggagtgtataaattcgtaggaagaaaatatgttgcgtcacatgcataggaaaatacatggatatgaagtcctctatatgacagctttgctgatttagatccatggaaatcatttaggtaaaaacctcgaaatttagtttaaggtggaacagaaatttcggtatatatagagattaatatgctggactttgaagatatggcttcaaaaagaaattatgttcccttgattgcagaaaccttttttctgatgcagtaaatgatgattatatatataatgcagtaaatgatgatgtgttgttaactcgtaatcttaacaagcgcttaacatcttagtgatgttctttttttttcggaagaagggcaggtgggccctcttaggctcttattaaagagaaggaataaaagcaaaagttctaccagtccaacatcttattgatgatcattttaaaaaaccctgaactttttataagcaaccttgcttcccacttttttttttctcaaatattccgaaatacaacgaaccatttcagaaacccagcatctttgtgtgttcttgttcctaatgtttcataatgaccatgcatggatgtgtggctataactattctttgtgtggttgattcgtgatgactctgcaggtgcattcattggtgtttcgttggaagggaacttcgttgcaacccgaagggacgcaaatctgcggttttacggcgacccgtatctgacaaccagcgatattctcatgggggatatgcagagaccaaatgctgccaagtttctgtacacagcgttggatggcctgtactctgggctgagtcgttaggacgatgtaaatctcaactgtacatatttgctctgattcttctggctgtaggcgtttttagctaggcttattgattcttctaagtgcttgccattgtagctaggtccactgctatcagtcaagttccagatggcaagtcaaaacctctatagtttacatgtaaatatatcttcctatgatacatacaccgcattgttcgaagtttatcatcggatatttgtggtggtatgcaactatagaagctgttacatgttactgtatcatggatcatcgaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0272400, RefSeq:Os07g0272400