Os07g0290800

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Revision as of 08:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0290800| Description = Tic22-like family protein| Version = NM_001065929.1 GI:115471590 GeneID:4342948| Length = 4562 bp| Definition = Ory...")
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Gene Name

Os07g0290800

Description

Tic22-like family protein

Version

NM_001065929.1 GI:115471590 GeneID:4342948

Length

4562 bp

Definition

Oryza sativa Japonica Group Os07g0290800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:11301086..11305647

Sequence Coding Region

11301135..11301608,11302497..11302571,11303027..11303086,11304822..11304881,11304963..11305043
,11305131..11305166,11305418..11305510

Expression

GEO Profiles:Os07g0290800

Genome Context

<gbrowseImage1> name=NC_008400:11301086..11305647 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:11301086..11305647 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctttccacttccaattcccatggctccccaacaaccccacctcctcctcctcctccccaacgaaaccacctagccctgcaatccccaaccccttcctccccatccaggccggcctcgcctccttcctctcctccctcccgctcccacgcgcggccttcccgccgccgccctgggctcgcatctcctccgcctcagcctccgcggcctcggcctcggctctccccgtggcggagatcgaggagcggctcgcgggggtccccgtgtacgcgctcgccaactcctcgcaggagttcgtgctcgtgtcgtccgcccgcggtgggggtgggggtgggggaggtgcccgggcggcggtgccgccgccggcgctcgggctcctgtgcttccggagggaggacgccgacgccctcctggcgcagatggacggggacatggcggctggctccaccgtcgtgcccgtcgcgctaaacaaggttatccaacttaagtccgatggtgtggcatttagatttgttcctgattcttctcaggtggcaaacgcaatgaagttaatggaaaatgaaggccagtatgtgaatgatggatttccaggggttccagtttttcagtcaaggagtctagtcctgatgagtgataacaagagatatcgtccagttttcttcagaaaggaggacttggataactcactacatcgagcctctcgtgaccagcaaaagcctaaccctgctgtaaaaatgggtgacattcaggtttcttctttggagaatatcatcaaatctatgaaggatagctcctcttccaaatgggatgatgctgtttttattcctccaggatttgatcttgctactagttcaaagcaatcgaatcatgacaactag</cdnaseq>

Protein Sequence

<aaseq>MPFHFQFPWLPNNPTSSSSSPTKPPSPAIPNPFLPIQAGLASFL SSLPLPRAAFPPPPWARISSASASAASASALPVAEIEERLAGVPVYALANSSQEFVLV SSARGGGGGGGGARAAVPPPALGLLCFRREDADALLAQMDGDMAAGSTVVPVALNKVI QLKSDGVAFRFVPDSSQVANAMKLMENEGQYVNDGFPGVPVFQSRSLVLMSDNKRYRP VFFRKEDLDNSLHRASRDQQKPNPAVKMGDIQVSSLENIIKSMKDSSSSKWDDAVFIP PGFDLATSSKQSNHDN</aaseq>

Gene Sequence

<dnaseqindica>50..523#1412..1486#1942..2001#3737..3796#3878..3958#4046..4081#4333..4425#accgtcgtcttccccgccggccgccgctcccctcctcgccaccgccgccatgcctttccacttccaattcccatggctccccaacaaccccacctcctcctcctcctccccaacgaaaccacctagccctgcaatccccaaccccttcctccccatccaggccggcctcgcctccttcctctcctccctcccgctcccacgcgcggccttcccgccgccgccctgggctcgcatctcctccgcctcagcctccgcggcctcggcctcggctctccccgtggcggagatcgaggagcggctcgcgggggtccccgtgtacgcgctcgccaactcctcgcaggagttcgtgctcgtgtcgtccgcccgcggtgggggtgggggtgggggaggtgcccgggcggcggtgccgccgccggcgctcgggctcctgtgcttccggagggaggacgccgacgccctcctggcgcagatggacggggacatggcggctggctccaccgtcgtgcccgtcgcgctaaacaaggtcggttgctactcaacttagttagtactcaggtgttgctcgatcgaatccttgaatgcttgaattcgaaggagatcatttctgtactttagagtacttcgtgcagtttggaaatgtgattatcttacgacgttggaagaaaatttcatcagtttcctggttcacatagttatccaacttctttacattggaaaattgttcattttcctggttgctgttgctggcccctgaacttgtcgggggctcgcaggccgagatttcctcactgccttggaagagtatataggataaaaagaaaaaggaaaatttccattttactctgcgaactatttcgtgggaacacctaacccttaaactatttctcaatctcattttactcccggaactacttaaaacgtctgcctttacttcctaattaaaattataattttttgtttctccttatacaaaacaatttaaaatttggtagaaccatacatgacgatgtaacttacatttacagaatttttcatgacagtttgcattttgcatgctgttattagattcttctaacctatgcatataatgattaaaaactgtaaaatcacagaaaatatcgtcctacaatatgacttacataaagagaggaaaaagaaagagaaatgtcactagggagtaactgggtcattttcatttgtttagggagttcaatgcttggtcacactagttagggagtaaatggacttctccacaaataaagggaaattatgatcagcaaactgtagagaagacaaccaaaagtggcaaggcagcaattagcttctttgggggtggcaaataatagagtagcaatgtcaggagtagtacatgacaattctcccaccttatatatgatctcccttttttcaggttatccaacttaagtccgatggtgtggcatttagatttgttcctgattcttctcaggtggcaaacgcaatgaaggtaacatccttttcaagtacattcaacatcatttgattttgtgatacctgtataaaagaaaggaaattgtgttgccaataacaactgttctgttagcggggaaccaaattatagaatcaaaatattttttttgccagtgattagtgaactgattttctaccatcgataatgtaataaacaggtgcaccagttgaagacatatcagtgcctaataagtcttttttttttatgagaagcttaaaagttattatattatagaatcaagatatttcttgccagtgattagtaagttgattttcgaccattggtaacataacaggtgcaccagttaaatacatattagtgcctaattaagttatcagtttttttacgagcctaataagttctcactataccagtttatttatcttattatgttttcttatgtgacgtagcagctatatgtatctttgcagttaatggaaaatgaaggccagtatgtgaatgatggatttccaggggttccagtttttcaggtttgaaattattgtgaactatgtatcattcaataggatggaactgatattaagataaaatgtacaggacatatttgttattattccttaagtttatagcagtgagagatgaacaagtatataaagttcaagcatatttggaaattatactgtaacctcgatagaaatttagtatagtataaatgaactatcaattgaaaatttacgtttcagttaaaagatgtaccagatatagtgtgaggataggcagtagacattcttttgaaatagtttctacgctagattcccatctaaattaaaacattacagtgctaacatttttgaagataagatacatctttgtacttggttataataataacccaagcaaaagggtgccactaatcaaggtgtaatgtacgggcgcacgtacacgcggcgtcgcagggcacgcgatgtgcgccgcgctgctgatcgagcagcacgcctgagtcagccggtgatcacatcaagtggctaagattagaaggaagagagtaattggttgtttcctttttgttactttcctttggcagtccttaagtttaggaagagtggttgggccggaggccatatattcctgtaaccgcacattgagaaaaagggggaagaatcattcagtctaatctcctacctcttctctaagccacgagcctgggggcaaaacccggcgagtgttgagcgacgtgggggtataaccccgtcgtgtttaccacggagcgcgggtacgagctccgtagtagaggcccggcgtccctgccgcataccgcccttgacacaaggacaacaaaaaggaaactttgaaatgctcatgatttaatcctgattaggtgctgcatgattgataaagcccatgcatagcacacattcctttttttcagacaaaaaaaaatatgccagataaccagattcctacactcctctacatttgttttttttcataatgatgagctccattatgtccagggccaccattgacaccttagttctctgttttaccatgttatcagacattttatgctacatgtaactgtttttccatctgacaaaaaaacccacccttctagagcattgccttttggctagctaccatttctcttggaagttgaggtattgtttggtttggggaatgtgatgttaggggtgatgtggaacaattcctgttaggtgttccataattccattgagtggattggatggcttcatcaaagacatccacatggtctgcctctttttggttgaagttctaatgcttgtgcttgccaagacagtgacaatggacaaatcggttctgcctccacattctagagcatcatctgagttgtacatgagcccagggcatgagttggatgagtttgtccaacagaacaattcagctatcccatctgtcatttctagggaatataccatgaagtggagccatgacccattgcttcttggcccaggaaccaaacatggggttgtcccatcttcctgaacctcatcataatctcaccctgttccagctctcgtaagttgtaacatcaaatgctaggtttggggacaggttacctgttcgggacttgtgtcctgccccttattagtcacagtgtgctgtgtccatcatttatatcctgttatcaaaaaacatattatatttttgtactatatctcatattcttctcgggttgatcatgacaataaactagcaaactaatgaccaatgatctatcttcagtcaaggagtctagtcctgatgagtgataacaagagatatcgtccagttttcttcagaaaggtcagggataatttctcaatgtttcccttgtgaacatgggttattcttcttttcttgcttcaaagttctatgcatgtttaggaggacttggataactcactacatcgagcctctcgtgaccagcaaaagcctaaccctgctgtaaaaatgggtgacattcaggtaccacattccttgcttacttctgttttgtagattgagtaataaacttttggatttacagtatatggatttgcttcttttttccaggtttcttctttggagaatatcatcaaatctatgaaggtaaatgttaactgcatttcagtcaatctttttctctttcaaattatattgtcgtgctgaatactatggttggatccttttttatttaaatctatattgttactgtgaactatttaaaaccagagtcttgagtttggtattctgtgatcccacctatgtttgctgtatgaatgtgaacacgttgtatgattttgatgaacattttatttattcaagttgatcttaccaaaattaatatgatatatttgcaggatagctcctcttccaaatgggatgatgctgtttttattcctccaggatttgatcttgctactagttcaaagcaatcgaatcatgacaactagatctttatttatgttgaagctgcttaactgctcttgtcatggaaatgcttacatgaacatattgaagaaatagaatacatgttcataccatactagcaacttgataatgggtaatgcaattataagtttgtcgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0290800, RefSeq:Os07g0290800