Os07g0297300

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Revision as of 08:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0297300| Description = Conserved hypothetical protein| Version = NM_001065949.2 GI:297607053 GeneID:4342969| Length = 5617 bp| Definition ...")
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Gene Name

Os07g0297300

Description

Conserved hypothetical protein

Version

NM_001065949.2 GI:297607053 GeneID:4342969

Length

5617 bp

Definition

Oryza sativa Japonica Group Os07g0297300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:11991339..11996955

Sequence Coding Region

11991339..11991531,11993377..11993683,11993760..11993848,11993987..11994066,11994477..11994572
,11994647..11994751,11995035..11995118,11995252..11995349,11996103..11996197
,11996280..11996353,11996449..11996726,11996820..11996955

Expression

GEO Profiles:Os07g0297300

Genome Context

<gbrowseImage1> name=NC_008400:11991339..11996955 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:11991339..11996955 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgctcttgccggagacggcgccgaggctgctgacgccggagaccatccgtgcggcggccaagcagtcccagggcatccagctcgtgcccctctccctccgccgcgccattaagcggtacctccgcgaccaggacaaggcgcacatgaaccggaaggtgcttcagctctcggcctccttcgagcgtgcaaagggaaccggcaccgagctcgctgcggctgccatgcgcggcgctctcatcgacgatccgcgcgcgccctcaggcgccgagcagcgggccgcgcggtggaaggtgcggtctgcctatggagatatcggccttcggtaccgcgaggacgagacggtcgcatacgttgcctcccggatgccagccatctacgccgcgtgccaccgtgtgctccgtgaggtccgtcggaggttaccagactttgcacctgccaaagtgttggattttggagcagggccgagttcagcactttgggcaatgagggcagtgtggccaaagtctatagagaaggttaatttggttgagccatccaaagagatgcaaagagcagggaagaaccttctcgataatttgaaggggttaccacttattcatagctatgatagcatccaagagttgaaccgcaacattgaaaaacatgagcggcggcacgatcttgtaatttcatcttatgcactcggggagattccttctttgaatgaccgaataacaatagtgaggcagctctgggacctaacaggagatgttttgaagtgccgcaaaattgaaaaatccacacgtgctgctccaagtgaaatgaagagcattgtatgtcaagaagcctcattgaaaaatggtgcttttgtggttgccccgtgtcctcatgatggtcggtgtccattggagaatacagataaatactgccactttgttcagagattggagaggacgtcatcacaacgtgcctacaagaggtccaatggtgtgcctttgcgtggttttgaggatgagaaattttgctacgttgctttaagaaggggcaagcggccagaggaagcttggccactcgatggtatgaaatttgagactcttaaagaacgccacgccaagagaaacccagaagatctcatcattgactatgacgaacaatttccaagcgaggaagatgaagaggctcctgttaacgctgaggattgtttggtcccatacgactctgatgcacaagaactaggtttattccatgagaccgaagaggagttcgaagagcaatctgtccgtgctgatctaggaggaggctggggccggatcatatacagtcccattcgacgaggaaggcaggtacagctggatgtatgccgtgccaccaaacgggatgcatcggaaggcgcattcgagcgtgtcgtgatcacccaaagcaagaaccccaccatgcatcatcaagcccggagcacggagacgttcaggttctgcattgacaggggcggcacattcaccaacatccacaccgagctgcccggaaggagggaaggctacgagaatgaagcttctctccgtcgacccgtccaactacgagtctacgacgacgcccccatcgaagggatcaggaggatcctggaggagttctccggcgagaagatttga</cdnaseq>

Protein Sequence

<aaseq>MAAALLPETAPRLLTPETIRAAAKQSQGIQLVPLSLRRAIKRYL RDQDKAHMNRKVLQLSASFERAKGTGTELAAAAMRGALIDDPRAPSGAEQRAARWKVR SAYGDIGLRYREDETVAYVASRMPAIYAACHRVLREVRRRLPDFAPAKVLDFGAGPSS ALWAMRAVWPKSIEKVNLVEPSKEMQRAGKNLLDNLKGLPLIHSYDSIQELNRNIEKH ERRHDLVISSYALGEIPSLNDRITIVRQLWDLTGDVLKCRKIEKSTRAAPSEMKSIVC QEASLKNGAFVVAPCPHDGRCPLENTDKYCHFVQRLERTSSQRAYKRSNGVPLRGFED EKFCYVALRRGKRPEEAWPLDGMKFETLKERHAKRNPEDLIIDYDEQFPSEEDEEAPV NAEDCLVPYDSDAQELGLFHETEEEFEEQSVRADLGGGWGRIIYSPIRRGRQVQLDVC RATKRDASEGAFERVVITQSKNPTMHHQARSTETFRFCIDRGGTFTNIHTELPGRREG YENEASLRRPVQLRVYDDAPIEGIRRILEEFSGEKI</aaseq>

Gene Sequence

<dnaseqindica>5425..5617#3273..3579#3108..3196#2890..2969#2384..2479#2205..2309#1838..1921#1607..1704#759..853#603..676#230..507#1..136#atggcggcggcgctcttgccggagacggcgccgaggctgctgacgccggagaccatccgtgcggcggccaagcagtcccagggcatccagctcgtgcccctctccctccgccgcgccattaagcggtacctccgcggtaacgccctgcactactccctctgccacgtgcaccacctgctcgacgaatttcttcgacatcactgacgacacttgcacgcttgacgcacagaccaggacaaggcgcacatgaaccggaaggtgcttcagctctcggcctccttcgagcgtgcaaagggaaccggcaccgagctcgctgcggctgccatgcgcggcgctctcatcgacgatccgcgcgcgccctcaggcgccgagcagcgggccgcgcggtggaaggtgcggtctgcctatggagatatcggccttcggtaccgcgaggacgagacggtcgcatacgttgcctcccggatgccagccatctacgccgcgtgccaccgtgtgctccgtgaggtccaagaacggcagctctttttattgttgttgtcctcagcgagatgaatttgtttcctggagtgcttatctggactgaagcgtcgattttgcaggtccgtcggaggttaccagactttgcacctgccaaagtgttggattttggagcagggccgagttcagcactttggtgagcacagctcagttggcccgttgatatatattactgagaatgtaatttgtataagcttaacatggatgaaaaaatgcagggcaatgagggcagtgtggccaaagtctatagagaaggttaatttggttgagccatccaaagagatgcaaagagcagggaagaaccttctcgatagtaagtgttactctttctcttctagtcatgatacaatgaatatttaataagattgattactaggtggatttagagtagcatctgagtcgcaacctgcaaatatgcaggaatatcatatttaatttctcagtttgatatcataaattcactagccaagagcctgtgcgttgcaacggaaaaaataagtttctagcttgttaagttgattaaacacatatttagtctaagtagtacttttatgattttcattgaacaagtaggttatttcaaaatttgggagagccagcagtgaaacagggagactcgttgaagggtggtggaatagtatagaccgtgggtgtccccaaatgtcagtagtaggggtggtgtggcagagcagacaccaccactactaacattttaagtagtatagataaccttatggcaatagagatactgactatgttaatttaaacctcgtgttttcatagcattggtactttgtgttagaagccttttgcttaccatgtccatgaatatgttgacactcctgatgtcaaacactaagaactggtgatgctctcagtgtacaggctgttctttttttctgtcgtcatgatttttttttgcttttattacgaattagttataagtatttctgattaatgcttactttaaaaaagtttgtagatttaaagggataccacatatctacaatcaacagaatttaccaaaaaatattcattatattgttttatttgcaaatgtttgtagatttgaaggggttaccacttattcatagctatgatagcatccaagagttgaaccgcaacattgaaaaacatgagcggcggcacgatcttgtaatttcagtaagttcttaagacatgtggtgtttcactgtttcacagtggtgtttgactagtgtaattttgagaaactactgcagatcatagtgaattgtttatcttccaaccttcatttaatatcttctctcaattacagtcttatgcactcggggagattccttctttgaatgaccgaataacaatagtgaggcagctctgggacctaacaggagatgttttggtatatactacccttctcttgtgtgtttgtgtgtgtgtgtatgcttgtacttattggggatatttttatgactgttatctgaagaaaagctattaccttttaggttttgttagagcctggaactcctcaaggagcaaagattataagccaaatgcgctcgtatatcctttggatggaaaagagagtatgtctgacttttaccactcattatatgattcttctaagatttttcggtgatttcctatttgtatagcattatttacgtactatccgtgctttccagaagtgccgcaaaattgaaaaatccacacgtgctgctccaagtgaaatgaagagcattgtatgtcaagaagcctcattgaaaaatggtgcttttgtggttgccccggtaagctgaaaatgacaaaagctcaaaagcttacctatgcttctgtataaaactaatttcacatcatgcatcagtgtcctcatgatggtcggtgtccattggagaatacagataaatactgccactttgttcagagattggagaggacgtcatcacaacgtgcctacaaggtttccttttcatctatttcgtgccatgtgctatgctttttttttttttttttttttttgtagtaggcacttgtgttcaacagttgagaaaatgtacatatatctaaattacaaggattccttgaataatatcattatcaattaatttctgatgaaggtgttgcactgagatagatttgcattttcccatgtaattgctcttcatattggataggcttctatatgctcccacaaatgtgctgatcttagagtggtattttcactagtgaatggttgcaagtcaaaccatttaatgtgcttctaacttgtgctttaactattaaagcttttttttttttgttaagattcagccttattgaactctgtagatgttacccttttttatttcccgtttctgatgtttgctgcagaggtccaatggtgtgcctttgcgtggttttgaggatgagaaattttgctacgttgctttaagaaggggcaagcggccagagtaaaagctcgtgacttttttatatccagatttatctgattactacttttcattctatgcattcatttgcacatgtgcagcatatgctcctgcaactatatacttgacttaatggctattcttctgtctctaatttagggaagcttggccactcgatggtatgaaatttgagactcttaaagaacgccacgccaagagaaacccagaagatctcatcattgactatggtgatcatctactcgtgattattcctccagttctttcttggatcatgattttgaaaaccatcgttttgttgctcagacgaacaatttccaagcgaggaagatgaagaggctcctgttaacgctgaggattgtttggtcccatacgactctgatgcacaagaactaggtttattccatgagaccgaagaggagttcgaagagcaatctgtccgtgctgatctaggaggaggctggggccggatcatatacagtcccattcgacgaggaaggcaggtacagctggatgtatgccgtgccaccaaacgggatgcatcggaaggcgcattcgagcgtgtcgtgatcacccaaagcaagaaccccaccatgcatcatcaagcccggaggtcactttggggggatctttggccagtttagtctatggtgataaccacatttctgtggaagatctggagctcttcagcaacggattcgctgggtgacgctgctcataaattgtttgtggctgtgctgtgggttttaatttttgcttcagcaatacatatctgtaacaggtgtacacctagtttctcaatgaggaagatgcgcgtgaattcttctaggtcagaacatttttttggaataactctgagggctgaaaaccagcagtacacagtcggaagcccagcacctcagaagtgcacctcagaagtatcattttaacatgttcataacagtcaatttcttaattaaacaaaggcagaattagatggcaaaagtaaagtttctcaacatgttatactaccagtcttacaaaaaaaaaaagaagttatactaccaacaccaggttagcacatgaaggattggtttaccacagtctaaacttcattaatttttttcaactagcctaattttcccttcccaattatcgtgcctaatattcccttccaattatggtctatcatgtattctctccgtatcatattatcagttgttttttttctagtcaaattttgttaaggccttgtttagatttaaacttttttcttcaaacttccaacttttccgtcacatcaaatgtttcgacacatgcatagagcattaaatatgtaagaataaaaaaaccaattgcacagttcgcatgtaaatcgcgagacgaatcgtttgagcctaattgcaccatgatttgataatgtggtacaacagtaaatatttactaatgacggattaattagacttaatagattcgtctcgtagtttacagggggaatatgtaatttgttttgttattagtctacgtttaatacttcaaatgtgtatccgtatacgtcagaaaaattttggcacacgaactaaacacaggcacacagcctaattttgattaaatttatagaaaaatttagcaacatctaaaatattaaattggtttcattaaatttaatattaaatatattttaataatatgtttgttttatgttaaaaaatactactatacttttttctacaaacttagtcaaaattaaagaagtttgattagaaaaaaaatcacacgacttataatatgaaacgaaaggattatttcaaaagaaaactttattattattacttttaaccatgcaatggaggcatctgatgacactgataattaagcggagcccactagtcagcaaaacccaagccagatttttcctccggttctttccttccgtcctgggcgttccgttttcatcttcaaaggcagacagatacaaccgtccatatcgacgcctcgccgccgccattgccttcgccgttttgcacagcgaagcatcacgctctcctgtactctagaaccacctcacagcactacgcgagctctccttctcttcctctcgtagagaaacgtagataaaaatgtaaatattagtgaggaacctaatatcaaataaatagaatggaagaggcttcgaacccaaactgagctagcccacctccttttggagctagccgggagaatcctagacgtttctcaagaagcatagatccatctgtagttccacaccactatttgattatcatggtaagtcttcccctgtgcaatattatcttcttccagtccggccaaatccctctgcgctcgtctcctttgtttgattaattcacagtacagctcaatgctatatatcacttctagtacttactacagtaatccattatccattaccagattaatctgaaatggctgcatcaacgcgcgctgctgttttgggtagcacggagacgttcaggttctgcattgacaggggcggcacattcaccaacatccacaccgagctgcccggaaggagggaaggctacgagaatgaagcttctctccgtcgacccgtccaactacgagtctacgacgacgcccccatcgaagggatcaggaggatcctggaggagttctccggcgagaagatttga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0297300, RefSeq:Os07g0297300