Os07g0419300

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Revision as of 08:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0419300| Description = Similar to Thaumatin-like protein| Version = NM_001066011.1 GI:115471754 GeneID:4343037| Length = 3263 bp| Definiti...")
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Gene Name

Os07g0419300

Description

Similar to Thaumatin-like protein

Version

NM_001066011.1 GI:115471754 GeneID:4343037

Length

3263 bp

Definition

Oryza sativa Japonica Group Os07g0419300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:14048984..14052246

Sequence Coding Region

14049018..14049087,14051300..14052060

Expression

GEO Profiles:Os07g0419300

Genome Context

<gbrowseImage1> name=NC_008400:14048984..14052246 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:14048984..14052246 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgggcgacttcctaccggcctccaccgccgctgccttcttcgtcctcttgctcggtgtcaatggtgcagcggccgtcaacttcacgttccatttccataacaactgcccggagaccgtctggccagcggcgctgtcctcggcgggccgcccgccgttcccgacgaccggcttcgcgctgccgccgggcgcctccctctccgtcgccggcgtcacagccacgtggtcgggccgggtgtggggacgccaccggtgcgccacgggcggcggccgcttctcctgcgagtccggcgactgcgggacggggcaggtcgcgtgcaacggcgccggcggggcgccgccggccaccctcgccgagttcaccctcggcggcggcggaggcggcgccggcgccctcagcgacttctacgacgtcagcaacgtcgacggcttcaacctgccggtcgaggtgcgcccggagctgttggagcggcggcaggagggcgccgccgccgcgctgtgccggacgacggcgtgccctgcggacatcaaccgcgtgtgcccgagcgagctggcggtgcgagcggcagatcgcggcggtgcggcggcggcggcggtggtggcgtgcaagagcgcgtgcctggcgttcgggacggacgagcagtgctgccgcgggcggttcgcgtcgccggacaagtgcgctccgagcgagtactcgaggctgttcaaggcgcagtgcccgcaggcgtacagctacgcgttcgacgaccggagcagcaccttcacctgcgccaacgccaccggctaccgcatcaccttttgccccgccgccgccgccaaaaactaa</cdnaseq>

Protein Sequence

<aaseq>MAMGDFLPASTAAAFFVLLLGVNGAAAVNFTFHFHNNCPETVWP AALSSAGRPPFPTTGFALPPGASLSVAGVTATWSGRVWGRHRCATGGGRFSCESGDCG TGQVACNGAGGAPPATLAEFTLGGGGGGAGALSDFYDVSNVDGFNLPVEVRPELLERR QEGAAAALCRTTACPADINRVCPSELAVRAADRGGAAAAAVVACKSACLAFGTDEQCC RGRFASPDKCAPSEYSRLFKAQCPQAYSYAFDDRSSTFTCANATGYRITFCPAAAAKN </aaseq>

Gene Sequence

<dnaseqindica>35..104#2317..3077#attcaggttgcaggagaagccaggacgagaatccatggccatgggcgacttcctaccggcctccaccgccgctgccttcttcgtcctcttgctcggtgtcaatggtaatcctatctaccagaaaatctatctgcaaatagtccttttcagtctgatggatctactggtcacttgtgtttctatagtagtaatatatatagttgaatggtttgccgaatcgccgtgaaatatgtgtccaaatgggccatgtatgtagaaatcctgataccggcatgggcgtgagatgcggtcctggacaacttgcttccgtgcttgcgcatggctgccctgttcattcgcatctcaggaacttcatacttggaaacggtccgttttttgtgtttgcctcttcttgatgccagaaagattctgagtaggttttgaaaacaaagtgtttctcaaaacttaaggctggttctcaaaacgacatcctgtcttttagttactcgtaatgattagagcaagtttaatagtagagctaactattgactattaggctgtgttctttcctcaaggttcccaacctcacatctctcgtttttcgcacacatacttcacaaactgttaaatggtgcgttttttgcaataaaaattccatacaaaaattgttgtaaaaaaatcatataaatcattttttaattttttaagctaatacttaattaatcattcgttaatttgtcgctatctttttgctcaaagaaatacagtcttagcctatgttagagttaacttgtataataggctaactatgaggttggctctatttttcctctcatatctctttctttcaatatgagtttaatataaatatcttgaagaatgtgtagaactaactcttgtatgagagtaaacactcctcgcttttctttctctttctttcacataagcttataattagcttatagcccactattatccttgctttcacaggtcgatgaacctacaatgattccctttattgttgactcgctgagtgttattcgcataatttttatttttcagttatcgagtgtataagcgcatgaattttttagttctttaatattgcatccaatctactcataattgacatgattataagacgtatggacgctctactcctgttttttttttttggacttccatggttcatgcttttcatgcacgtccaaaatccaaacgtgcacacacagtgatcgcactcgttccaaaacatacacgcacagtgatcactgtccctgcctctcttgatttgtttgttttcgtgctctttgctacgagtatgagataatctttgttgtacataagcgggcagccatatgtgtttcttcttcttgagatgatttgcttcttccctctgttttgcttccgatgactgtcaacccttttagtgcctatcaaaaccaatagtcacattgtaaaatcgtaactcatgcgtgaccatatacaagcatctataaaagggtattattttattcaagaaaatgaaatatgtaagtttgataaaagagcaaaatgaaatataagtatgcttgcataatcagcattcacaccatacgcatgcccgggagcatatcacgtgcagttgtgcactaacaaatgtcataaaaagatcttaaaaaaactatatatgtgtacttctaatattaccccacctatatatgaaattccaacttcaaattcgtaacgcatagggaacagaaaagagagaaatctaacaaatatatttactcttgaaattatcagattttttattgctgaaataaaataaatttgaaattgggattttatatataggttaagtaagattagaagtatatgtacatatttttaagtttttttggcatttgttttttttaggggactgctaataactctattcaagccacgttaagattcttacaatcatcctcaagaaaagataaaatgaaaaccggagcgcaggttaacaactgcaccttcctttttggcatttgttagttggtgtgatttgtgcaacgagtgtatccaaaacttttttgcgcatagtatatgttcctcgcgtgccgacactggctgtagctaggtagcatgtaccacaagcatgtgctgttccccttccagccaggataggtaattaaggtaagaaattcagctggagcccaggatcatgcaaataaccagtagtggttcatgacaaccaaactcaccatttttttaaaaaaaaatcacttgttaagtcctaaaaattgatgtatcaagatttccaacagtggattgattggaatttcgacacattattgcgaatgacttcatcaggtgcagcggccgtcaacttcacgttccatttccataacaactgcccggagaccgtctggccagcggcgctgtcctcggcgggccgcccgccgttcccgacgaccggcttcgcgctgccgccgggcgcctccctctccgtcgccggcgtcacagccacgtggtcgggccgggtgtggggacgccaccggtgcgccacgggcggcggccgcttctcctgcgagtccggcgactgcgggacggggcaggtcgcgtgcaacggcgccggcggggcgccgccggccaccctcgccgagttcaccctcggcggcggcggaggcggcgccggcgccctcagcgacttctacgacgtcagcaacgtcgacggcttcaacctgccggtcgaggtgcgcccggagctgttggagcggcggcaggagggcgccgccgccgcgctgtgccggacgacggcgtgccctgcggacatcaaccgcgtgtgcccgagcgagctggcggtgcgagcggcagatcgcggcggtgcggcggcggcggcggtggtggcgtgcaagagcgcgtgcctggcgttcgggacggacgagcagtgctgccgcgggcggttcgcgtcgccggacaagtgcgctccgagcgagtactcgaggctgttcaaggcgcagtgcccgcaggcgtacagctacgcgttcgacgaccggagcagcaccttcacctgcgccaacgccaccggctaccgcatcaccttttgccccgccgccgccgccaaaaactaactaatttagcagcctgcactgcaggccggcgatcgatcactcaaccgattgattagtactggaaggaacttgaattcttagaaagacggtgtagtcatgacgtatacatgtatgtttcggagcatctctcaagtttcgatcattatttggaaccttccatgggaataaaatgaatacaattttagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0419300, RefSeq:Os07g0419300