Os07g0419800

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Revision as of 08:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0419800| Description = Protein of unknown function DUF1644 family protein| Version = NM_001066013.1 GI:115471758 GeneID:4343039| Length = 3...")
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Gene Name

Os07g0419800

Description

Protein of unknown function DUF1644 family protein

Version

NM_001066013.1 GI:115471758 GeneID:4343039

Length

3447 bp

Definition

Oryza sativa Japonica Group Os07g0419800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:14096906..14100352

Sequence Coding Region

14097122..14097869,14099005..14099054

Expression

GEO Profiles:Os07g0419800

Genome Context

<gbrowseImage1> name=NC_008400:14096906..14100352 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:14096906..14100352 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccatcctttgttcttttgaagtgttcagtgcatacaactgctccctgtagaggttctgtatctggctggattcctgctggagaagtgaggaagtatcttaacgagaagttgagaacatgttctcatgattcctgcaaatttgttggaacctacgagcagctgcgtgaacacgctagaaccgcccatttgcttgcaaagcctgcacatgtggatctttcgaggaaaaggacttgggatcgccttgagcgtgaacaggaggttggtgatgtcataagtgcaattaggtcacagaatcctggggcaataatagttggtgactatgttattgagactagagatgcgatgtctcctgatgaaaacactggagatgaaagcaacgatgagtggtggcgcgactcaatagaatcacctgataacaggtataactcccctaggctcttgccgaatgaagctccagaatcatcaataatctgggcagatgaaaggcatggactgccaaggtttcagcctcagaataacagagtgttgccccggttttcgttcaccaataggagcagctcacggtcagattggcaccgtatccgacggccgagtagacagagcctagcgcgtcgaggcttgttgaatcgaccctacaggaacaacagcgactatcatggctttcgtccccagctatttgatcagccgaatggtagtagccatcgttcaggtatcaacaggagccttgatgacccatcatttgtgcccagacggcagcgtttgagatacacccacaggagccatcatatccgtgattga</cdnaseq>

Protein Sequence

<aaseq>PSFVLLKCSVHTTAPCRGSVSGWIPAGEVRKYLNEKLRTCSHDS CKFVGTYEQLREHARTAHLLAKPAHVDLSRKRTWDRLEREQEVGDVISAIRSQNPGAI IVGDYVIETRDAMSPDENTGDESNDEWWRDSIESPDNRYNSPRLLPNEAPESSIIWAD ERHGLPRFQPQNNRVLPRFSFTNRSSSRSDWHRIRRPSRQSLARRGLLNRPYRNNSDY HGFRPQLFDQPNGSSHRSGINRSLDDPSFVPRRQRLRYTHRSHHIRD</aaseq>

Gene Sequence

<dnaseqindica>2484..3231#1299..1348#acacaaacgcaagcgcaacgcaaacgcagcaagcgacgccaccccccacccacctcttcctcgagaagaaaagaaaactggaggaaaaaaaaaaagggggaagaaaaagagaagaagaggcaggcagcggcggagggacggcgacgggggtcctccgatctggagtcgcgtcaaacccccccgtaaaatttcccccctctttccactctctctctctctctctctctctctctccctcccccgccgtcggtgtcctgcttcttgatctgcgcctgcggatcgaccgatcggtcggtcgatccgtcccgatcgatcggtgggttgtgtggggggaagggttcggtttgcggtgatcggtcgctgatttgggtaggtctcgttggggtaggtctcgttgggtgaatttgggttgggggggggcagcgatttggttctgatctgttcggagattgtaacaagagtgggttgcggggggattaatttctatcgtttcaaggcatcgatgaacgaggagcgtcaggaattctcccctttcgtgggttgctgtccttgtcgttcgttcgtgtattgatttgtacggaggtctgacgatgatcgatccaggatacatatgaatccgttagggccaagtttgcttgatgccaactgtgcatggatcactgcgcgattttacgctttttagtgtttatatagaagcctgtggttgaaaatagtccatttctatggtaatttaggagatattcaccgtaatacatgtgatgaaaacttatgtagtgctgaatctttatgcaatcatgaatgctataataaactcacgcacgctgtacatgcgtgctcactaaatgttgtggctcaaggacctttgttcatttttcctacaggaaactttacctaattctagttcgtacgtgtagatttggttaggaacgtttgaaatagatggatgcatacacgtacataatgtattgaaggagatctaatattttcttacggtaactcctgtgtctagcataatgagataaattggagaatggctacaaaattagccgtttgcagctgaatatgtttgattataatggtttctgcaactcctgtccaaactgatagaaagtatggtgaatttatgtttggtccagatgaaccacaatgtgctgatacctattgttgtgtctgtacagagttgttttggattctttattctcgtcactggattctgtttacgtagattctgcttacctagtttctcttttactaactgtaaacattttttttcaggattcctatcgtgaataccataaccatcctttgttcttttgaagtgttcagtgcatacaactgctccctgtaggttagtactagcattctgtccaaagataagttaaatgtacttatttgtatatgcttaatgatgtcccatttgttcgtttttcatctgttgttttgtttgtttgtgtacatgttgccaacacctcttctgcatttaaacaaactttcttgatttctatacaccatagaagaccgaaaataatgtttttaggggggagttctgcagtttgttcttttttagtgcaatctttgtttaggaaccatggatataatgattcaagaatagttgttgtttagctgcactttctcattcacttgtttcgtttttttttctaattattttatgcatgagatcgtcctcactagtcaccacaatactttctttaggactaatatttatttggaaaactaaaatctgatgcctgctaaatgatctgaaattcatttttatacagttcttaataattgtgttagacctgactaatttgccttggtattttgttttggcacttctaatttggatcattcatgtttgttgttataaaattgatggtttttaatgagtatataaggatatgtttagcaaggtaatgtttttcactaattgcgtaaatgctaagtttgagacactgaatagtttttccttttcaaaaattctaacgatcaagtgaattcaacacagttgatttcaagatgacaagtaggaaaagtaacagatctacagtcacatcatgcactgctctgcatatggaatgggacaggatttcttgccctatttgtatggagcaaccccacaatgctgttttacttgtatgcagttcctacaagaatggctgtagatgttacatttgtaacacaagtcatcgacactctaattgcctagatcgattcagaaaaatgaatggagatagtaaggtccgtgcttcacactcaaccacttcggtgatttcaaactccaataacagaactgttgaacgaagctctcactatagtatgattcccagacatttacaaagcccaagactaggaagacatgtcaataatgctaataaccaagaacctgcaaattcaacattacccgtagaagatagcattttaatggaagaatgtcatgatgccatgcaaagttcagctgacttgaagtgccctctctgtagaggttctgtatctggctggattcctgctggagaagtgaggaagtatcttaacgagaagttgagaacatgttctcatgattcctgcaaatttgttggaacctacgagcagctgcgtgaacacgctagaaccgcccatttgcttgcaaagcctgcacatgtggatctttcgaggaaaaggacttgggatcgccttgagcgtgaacaggaggttggtgatgtcataagtgcaattaggtcacagaatcctggggcaataatagttggtgactatgttattgagactagagatgcgatgtctcctgatgaaaacactggagatgaaagcaacgatgagtggtggcgcgactcaatagaatcacctgataacaggtataactcccctaggctcttgccgaatgaagctccagaatcatcaataatctgggcagatgaaaggcatggactgccaaggtttcagcctcagaataacagagtgttgccccggttttcgttcaccaataggagcagctcacggtcagattggcaccgtatccgacggccgagtagacagagcctagcgcgtcgaggcttgttgaatcgaccctacaggaacaacagcgactatcatggctttcgtccccagctatttgatcagccgaatggtagtagccatcgttcaggtatcaacaggagccttgatgacccatcatttgtgcccagacggcagcgtttgagatacacccacaggagccatcatatccgtgattgatctaaagcagcattgctcttgctgtataaattaatttggcaaacagccaaagctatccttgtaaatagtaatgccaaactcaaatttatttttctttagttggtctacgctatatatcaatgtatattatccagcagtctagtctagatgcaaaactttgctccttaaatatcatcttcggtaccgtcactttcgaatgcaattctttgttggctt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0419800, RefSeq:Os07g0419800