Os07g0447000

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Revision as of 08:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0447000| Description = Protein of unknown function DUF594 family protein| Version = NM_001066075.1 GI:115471882 GeneID:4343115| Length = 41...")
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Gene Name

Os07g0447000

Description

Protein of unknown function DUF594 family protein

Version

NM_001066075.1 GI:115471882 GeneID:4343115

Length

4175 bp

Definition

Oryza sativa Japonica Group Os07g0447000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15958036..15962210

Sequence Coding Region

15958036..15960097,15962107..15962210

Expression

GEO Profiles:Os07g0447000

Genome Context

<gbrowseImage1> name=NC_008400:15958036..15962210 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:15958036..15962210 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggcagggcctcagcgccaatgcacttggcgctgacaccttgcacaccctaaatagaccgatgtgcggcaatgaattaacggtgtcgctcgtggtgcaacgctcactatcacgggcccaacaattcatcaacaagtgggagctgcagtgcatgctgctggcgagcttctccttgcaaatcttcctcttgttctcctctggcttccgcaagcgccacagctcccgtgtgctcagtgtgctgttgtggcttgcctacctctcagctgaccctgtcgcggtttatgtcctcggccgcctctcgctacgcgccagtggctcctctgacccacggaaccagcagcagctagtcctcttctgggcacccttcctgctgctccacctcggtgggcaagagaccatgacggccttctccatggaggacaacacgctctggaagcgccacctgctgagcctcgccacccagatggcgacggctatctacgttgtcagcaagcaactgcgaggagacagccggctcgtggctcccatggtgcttgtgtttgtctttgggacagctaagtacgccgagagaatttgggcgctcaggagagctggctctgtggcacctggaacgagtagctccactgcaaatcttgtttctcgtgcctccagcaacgccgtctgggacacacaggggtattatagtcagctgtgctatgttattgaaaggaagctggagagaaatttcgagttcatcctggctgtagcaaatgagggcttcagactaagcctgggctttttcatggatatgacaccttcaatttctctgcttccggaggatatcagtgagatcaaaaatagtgtggaggtttttaaatcttcagaggatattgtccacatggcatacaagctggccgagatcaatctctccctgatttatgactacttgtacaccaagtttgggacgcgccatttccacatcgtcccagtttgtaatgtcttccacttgatcatcaaaattgctctaatctcggtggcgctcgcgttgttcatgagggccagagctggacaaaaggcacatgatgtagttgatgttatcatatcttacatactgcttgttggtgccattgttctggagatatgctctgtcctcatgtcattcatctcatcatgctgggcatacaagacgatcatcactcttcccctagcatgcccactgtgccaaaaattccctggtgtaattgcagcattgctcagcttggtcaggcatctccaccctgacagccgaggggagtggtcaggaaagctggctcagtacaacatgattgagggatgcatccaggagaaacaggcaggcgctggcctgctacgacgggcgaggcgctacatcggcatcgatgacagcaaggccatcaagcatatcggtgtctctcctgaggtcaagaagctggtccttgacaaactgttggagatagcatccacttcgcgcgtgctggaatgggaccttggtgtcggcaagtttcgtggccaatgggctcagtgggttgttgaagcgaaggaagaccatctccgtagcgcagctcagcaagtgcttcaggttagtaacatccaaggcctggaatttgtgtcgagcgtccttctttggcacatcatcacagacatatgtttgcttgtcgatgaggatgaagatggcggtgctgagctgagaggccctatcagagacctgtcggagtacaccatgtacctaattgcagattgcggcgtcatggctggcagcgaaggacatttcgtgctcaggaagggccgccatgaggtgttaagctggctgcgggagaagggtgaatctggatgtgaccggaggaaggtgattgaggagattcgcaatgaggacagctccttcttcgctgataactattaccctgtgctcgatcgagctcgccgggtatcgtcggacttgcttgtgcttgaagaacccggcgatcgatgggagctcattgctgcggtgtggatggagatgctttgccacatttcatacaactgcggggctgggttccacgccaagcagctgacgacaggtggggagttcgtcacgcatgtcaagatgctcctgtttatgctcggggtgccttttctgagggatgtgaaggaaccgttgttctacagggctgggaacctctattcataa</cdnaseq>

Protein Sequence

<aaseq>MWQGLSANALGADTLHTLNRPMCGNELTVSLVVQRSLSRAQQFI NKWELQCMLLASFSLQIFLLFSSGFRKRHSSRVLSVLLWLAYLSADPVAVYVLGRLSL RASGSSDPRNQQQLVLFWAPFLLLHLGGQETMTAFSMEDNTLWKRHLLSLATQMATAI YVVSKQLRGDSRLVAPMVLVFVFGTAKYAERIWALRRAGSVAPGTSSSTANLVSRASS NAVWDTQGYYSQLCYVIERKLERNFEFILAVANEGFRLSLGFFMDMTPSISLLPEDIS EIKNSVEVFKSSEDIVHMAYKLAEINLSLIYDYLYTKFGTRHFHIVPVCNVFHLIIKI ALISVALALFMRARAGQKAHDVVDVIISYILLVGAIVLEICSVLMSFISSCWAYKTII TLPLACPLCQKFPGVIAALLSLVRHLHPDSRGEWSGKLAQYNMIEGCIQEKQAGAGLL RRARRYIGIDDSKAIKHIGVSPEVKKLVLDKLLEIASTSRVLEWDLGVGKFRGQWAQW VVEAKEDHLRSAAQQVLQVSNIQGLEFVSSVLLWHIITDICLLVDEDEDGGAELRGPI RDLSEYTMYLIADCGVMAGSEGHFVLRKGRHEVLSWLREKGESGCDRRKVIEEIRNED SSFFADNYYPVLDRARRVSSDLLVLEEPGDRWELIAAVWMEMLCHISYNCGAGFHAKQ LTTGGEFVTHVKMLLFMLGVPFLRDVKEPLFYRAGNLYS</aaseq>

Gene Sequence

<dnaseqindica>2114..4175#1..104#atgtggcagggcctcagcgccaatgcacttggcgctgacaccttgcacaccctaaatagaccgatgtgcggcaatgaattaacggtgtcgctcgtggtgcaacggtaagtttctttcttgctatatctgaggactagggttcgaatcccaggtcagccatttttgttttttttttaaaatcatcaatctacgtgcgtacatattaatgatgatctccattttcgtttttgtcttcaaatcttcaatgtacttttttttgtttaaattaatttttattaaaaagaaatatcacatttagtacaaatttaaaaagtagaagaatggattaaaaaaagtttagagacaacttttaaaagaaatatcacttttttataaaaaagaaattagaagaatggatttaaaaaaacttgagtttttttttaaaaaataaacaacaagttgagaactaagggtaagttttattctaaaatgtcacgtgtttttttaaaattaaaacaacacttgagcttgtaaaagaaatatcacttttttaaaaaatatttaaaaggaataacacatttagtacatatttaaaaataaaagaatggacttaaaaatacctgagctttgaaaaagttaaaaccgcaagttgagaactaagtaaaaaaaagtttagtaaaaacataaaggagagggttcgaaccctggtcactgtaacgccacctttcaaatacctaccactgagctaagccaaacctaattgttgcttttgcttttgcttttatttagccagtataaaggccagcgccgctgtagaacatatattctgatatttatatttatatatatatatatttaaaaaacagagagcatcattaatcatttatatgtactaatgtacgcacgtagattgaagatttgaagaaaaaaaaaagaacgaacaaggctgccgtgatagggagtcaaaccatggtgctagggtacacaagcaaatggtcataccattgcaccacaagtgcattgcttattaatggccgcgcatccttttaattagcctgtacaaggggtcagcgccaaatactttggcgctgaggccctgccacgtcgcgtctcgcccgccacgctggcgcgatgtcagcgccagtcccattggcgctgatatgaacaacctcagcgccaaagaggttggcgctgagccgacggcctatttctagatatagtttttggtatggactagtttcgaaataagttttctataaggaccaatttgtcaaaaaaacggtacagtttgactggctaagtacatggcaacgattacatttcataatcaaggattttaattgaaaaaaaatattctgattaaataggagggcgcccgctgagtttatttattaaaccagatagtaaatggaacgcaaagtgagcactgctacatggctgatatttttatcctgttttttgttttttttcaagatttggacttgtcttttcttataagaaaaactagaggcttccacttactaacattttatagtcaaaagagatagtgtttttggcttccctcactctgtatagtatctggagtgttgagctgttaccgcagttaagtgctataaggctacttatgcttgtgtatttatctatgttctttaatctttatattcatgaatggataatttacttaaaaatacttctttattgtaattaatgtgcaaaatgatttgagattcaacttaagatagtatgtgaagatagggaaagaatttgctacaagacataacattaagtgttagtgtttgcttggtgacagtctagagttttggtttgttggaaaacacttctaaatgtggtgacttgattcaatatattgagcatgattaaaataagattttcctatgttccggaatagaatatcttacattcttactgatgtaaaaaattcacctttgtgtccttgttgtggaacatactccctccctcccaagggactctggctatgaattgtctagattcttagctagaatcccttacatttagggacaaaggaagtatcaaatcatacagaacatatatgcaatcattcttactcttattttttctttcaatcctttaaattaccggtacactacatcagctcactatcacgggcccaacaattcatcaacaagtgggagctgcagtgcatgctgctggcgagcttctccttgcaaatcttcctcttgttctcctctggcttccgcaagcgccacagctcccgtgtgctcagtgtgctgttgtggcttgcctacctctcagctgaccctgtcgcggtttatgtcctcggccgcctctcgctacgcgccagtggctcctctgacccacggaaccagcagcagctagtcctcttctgggcacccttcctgctgctccacctcggtgggcaagagaccatgacggccttctccatggaggacaacacgctctggaagcgccacctgctgagcctcgccacccagatggcgacggctatctacgttgtcagcaagcaactgcgaggagacagccggctcgtggctcccatggtgcttgtgtttgtctttgggacagctaagtacgccgagagaatttgggcgctcaggagagctggctctgtggcacctggaacgagtagctccactgcaaatcttgtttctcgtgcctccagcaacgccgtctgggacacacaggggtattatagtcagctgtgctatgttattgaaaggaagctggagagaaatttcgagttcatcctggctgtagcaaatgagggcttcagactaagcctgggctttttcatggatatgacaccttcaatttctctgcttccggaggatatcagtgagatcaaaaatagtgtggaggtttttaaatcttcagaggatattgtccacatggcatacaagctggccgagatcaatctctccctgatttatgactacttgtacaccaagtttgggacgcgccatttccacatcgtcccagtttgtaatgtcttccacttgatcatcaaaattgctctaatctcggtggcgctcgcgttgttcatgagggccagagctggacaaaaggcacatgatgtagttgatgttatcatatcttacatactgcttgttggtgccattgttctggagatatgctctgtcctcatgtcattcatctcatcatgctgggcatacaagacgatcatcactcttcccctagcatgcccactgtgccaaaaattccctggtgtaattgcagcattgctcagcttggtcaggcatctccaccctgacagccgaggggagtggtcaggaaagctggctcagtacaacatgattgagggatgcatccaggagaaacaggcaggcgctggcctgctacgacgggcgaggcgctacatcggcatcgatgacagcaaggccatcaagcatatcggtgtctctcctgaggtcaagaagctggtccttgacaaactgttggagatagcatccacttcgcgcgtgctggaatgggaccttggtgtcggcaagtttcgtggccaatgggctcagtgggttgttgaagcgaaggaagaccatctccgtagcgcagctcagcaagtgcttcaggttagtaacatccaaggcctggaatttgtgtcgagcgtccttctttggcacatcatcacagacatatgtttgcttgtcgatgaggatgaagatggcggtgctgagctgagaggccctatcagagacctgtcggagtacaccatgtacctaattgcagattgcggcgtcatggctggcagcgaaggacatttcgtgctcaggaagggccgccatgaggtgttaagctggctgcgggagaagggtgaatctggatgtgaccggaggaaggtgattgaggagattcgcaatgaggacagctccttcttcgctgataactattaccctgtgctcgatcgagctcgccgggtatcgtcggacttgcttgtgcttgaagaacccggcgatcgatgggagctcattgctgcggtgtggatggagatgctttgccacatttcatacaactgcggggctgggttccacgccaagcagctgacgacaggtggggagttcgtcacgcatgtcaagatgctcctgtttatgctcggggtgccttttctgagggatgtgaaggaaccgttgttctacagggctgggaacctctattcataa</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0447000, RefSeq:Os07g0447000