Os07g0479200

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0479200| Description = Similar to SL15-like (Fragment)| Version = NM_001066168.1 GI:115472068 GeneID:4343225| Length = 5131 bp| Definition...")
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Gene Name

Os07g0479200

Description

Similar to SL15-like (Fragment)

Version

NM_001066168.1 GI:115472068 GeneID:4343225

Length

5131 bp

Definition

Oryza sativa Japonica Group Os07g0479200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18064807..18069937

Sequence Coding Region

18064915..18065088,18067511..18067664,18067765..18067837,18067990..18068056,18068144..18068203
,18068482..18068542,18068817..18068858,18069485..18069588

Expression

GEO Profiles:Os07g0479200

Genome Context

<gbrowseImage1> name=NC_008400:18064807..18069937 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:18064807..18069937 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggcagcggcggggacgatggagctggagatcctggggatcaacttcgggtgcgtcctcgcggcgctcgcggacgccaagatcccggagaaggactgcctgctcccgctcgcctccaagctgctcggctacgccatcgtcgccgcctccaccaccgtcaagctccctcagatattaaagattttgaagcacggaagtgtaagaggacttagtgtagcatcctttgagcttgaggttgtcggctacacaattgctctagcatattgtattcataaaggactgccattttctgcgtatggggaactagcttttctgttaatccaagcaattattttggttgcaatcatttactattactccccaccaatgggaaccaagacatggatgaaagctttactatattgcggactggctccaacagtattgggtgggaaaattgaccctgctctttttgaagtcctctatgcttctcagcatgctatcttcttctttgctaggcttccacagatatggaagaattttatgaacaagggcactggcgagctgagctttctgacctgtttcatgaactttgctggttccatagtaagagtgttcaccagcatccaggagaagactcccttaagtgtgatactgggatctgcaattggcattgtgatgaatggtacgctcttgggtcagatagtgttgtaccagaagcctgctccaaagaaagagaagaagagagattga</cdnaseq>

Protein Sequence

<aaseq>MVAAAGTMELEILGINFGCVLAALADAKIPEKDCLLPLASKLLG YAIVAASTTVKLPQILKILKHGSVRGLSVASFELEVVGYTIALAYCIHKGLPFSAYGE LAFLLIQAIILVAIIYYYSPPMGTKTWMKALLYCGLAPTVLGGKIDPALFEVLYASQH AIFFFARLPQIWKNFMNKGTGELSFLTCFMNFAGSIVRVFTSIQEKTPLSVILGSAIG IVMNGTLLGQIVLYQKPAPKKEKKRD</aaseq>

Gene Sequence

<dnaseqindica>109..282#2705..2858#2959..3031#3184..3250#3338..3397#3676..3736#4011..4052#4679..4782#atctccccaccacaccacacgccatctcctccctccgccgcggcgacgtcgagggaatcggggcggggccggagctagctagttcgccgccggcgagacgcgtgtgccatggtggcagcggcggggacgatggagctggagatcctggggatcaacttcgggtgcgtcctcgcggcgctcgcggacgccaagatcccggagaaggactgcctgctcccgctcgcctccaagctgctcggctacgccatcgtcgccgcctccaccaccgtcaagctccctcaggtttttctcccatcctctcccccaccacacacacacaattcgccatatgcgcccaacgatgagatgtgatgagatgagatgcgtgcgcttgcttgtggcgtactgatctgtgtgctcgacaggtgaatttcgtgctgggttggaggagaattagcgataggtggattttgtgctgggtgagaggagaattagcgtggcgtgtgagattttgcacaaaaaaacgctgcggtttctagtagcttgggctgtgatcttggcgcggcgtggcaaaaagaacggaggaatcgaccagtcgccagtggagttctttgtttgtttgttggatagctgtggggggtgggggtggtggtgatcctcgtggtgctcgtgtgcagtgcagggcatgaattctagcaatgttttcttccccatgagaaatattaagccctccttgctcaataatggcctgcaattctcacttctcaacccctcctttcaatctacagtctgattggtgagcatggctttcgggctctccgtgctctgctctggcactggcgttagcacatcgcaatcttggccaatcaatcgaacagcatgtcgcagaaagccctcgcctacagtggtaaaactatcgaggaaacctttgtccttgatagtttgtttctcgcaaatgcctgatgcaagaacccagtcaccaccaatgcgacaacgtttgggggccttgcggatgagcaataggatgaggccagccactgggacatatgtgggaatcatgtgcaggagctcagggcgcatactttcggttcctttggattccaaaattccatccaaggaatgcctgcttcgtttgatgtctaagatcctcggctaccatgtcgttgctgcatccgctattggcaagctccctcaggtgcctgtatctagggtcatcactaacaaactagtttgctatgtgtgcatgagtttgcctcttctcattgtggtgcaattatgcatgtataattaggtccagcagcttatgatcgtagctgtatttttgtgccaatttttggaaaggaattaacaaataaaaacatgttatttctgtttgttaaattgctacggttcacatgattcttgctttgttttgtgtaatacatggacagttgaaatgtcactggatgcaattatgcttaggggaaattgggttgctattttgctcaaattgttaagtggaagaacttgcagaatttacttattggcttggattgttagtgtcaatgaggggaactagggaagggtagtgcgtgatctgactacttgagaatgtgtgctgactgatagtagcctagcaaaatctgtaacatgtattgatcaatcagtgaagttagagaatggtgcattataggaatatgctatgatcattctttaaatagcatgtagtggtatctgtagtgggcctagtggcaaagtgttccttttacagagaataaggtagaacagagatgtctcaggtgcaacaagcccagttatgtacgcaaaactatggactcactcgatcaacgtatattgaaaataaggcttccaatataaagaagtctgatgaaatcatttatgatataaagaaacgttgaaactttatacataataaatttatacaatcttcagccacccatgaagatgttggatagaatcataccgttcacatgtctcaaagccaggggcggatttgagattttggggggggggggtgatgagccataagactgaacaaccaatatcaatagcaaaggaggtcaaatagtcactgtcaataacaatcaatgcgtaaactagtcctttaaaaaaatcttgaattttagctctttaataataccattgatagtttggaactaatctttgttgctaaatccctttaatgtaaactattgaataatctcgcaaataagtatctttgaaaaagatgagaaatcacaaactaattttgtagatcatgtttcttgctagtgttttttagacttgctaactaactaaactgataataattccaagctacacaaataaactagataattacctatcttatatagagtaaaaactgggggtgtggtggtgttggtgttcggataggatggtgttggccccctctggcaccccccacagctgcgccaccactcaaagctacgagaaacagttcaatataatagatatatggagtatgccatgaatgtatcatatgaatacctgaaatatgtttgccttgtgtagggaagcaccacgacacaacatataccatagtgagtggttaagggttggtttggttccttgccttaaccaaacagtaggaaaaataaatgattttaagatttttttttcccctcttaagcaaaatccttcttgcattataggataacctttcattttttatgtttttgacataactacaaatttcttgttgcagatattaaagattttgaagcacggaagtgtaagaggacttagtgtagcatcctttgagcttgaggttgtcggctacacaattgctctagcatattgtattcataaaggactgccattttctgcgtatggggaactagcttttctgttaatccaaggtttgtgtttcacctaatgtccaaatggactgcatattgatatctgaacttccttttacgtgacgaaagctgatttatttaacgtctgtctggtatgcagcaattattttggttgcaatcatttactattactccccaccaatgggaaccaagacatggatgaaagctttactgtatccttcagtttatctgtttatttttaattattctttgggtgctgacaacaacgatgccctaatcctcatggaaacatcgaaaagatccacagaatgttatgagaatctttctacttctgacctgcttttcctgaacagtgcttgtctagatattgcggactggctccaacagtattgggtgggaaaattgaccctgctctttttgaagtcctctatgtaagttataaatgaaagattattttgtgtagcacttgatatattcgtatatgcttgtcttttgattgtgtgtaatatattttgcaggcttctcagcatgctatcttcttctttgctaggcttccacagatatggaagaattttatggttcgttgttagatttctgtacatctagctatattaggtttatcttttcatggaaagttgctgtaactaggtgtactaaatagtaaaatggtaaccttaaatttaaatgaatcttatggtctggaccttagaataaataatttgggattgactagtatgacaatgaacttttcatctatcagtcagcattttgtaccaattttgtgagtggaggcttctaacaagtcgtttgacaatttgcatgtacaaactttctgacctgttgctacgatacgcagaacaagggcactggcgagctgagctttctgacctgtttcatgaactttgctggttccataggtaagcttaagtacatgccagattagttaccaaggcattacttttttacttcacaatccattttattctcttctttgtttgaaattaagtagtataagcacaaagtagtcaaatgttctgaatactgaatagggagcatggcttgaaataatcacatccttattcggctgagtagatccttctgtgcagccagtatacctgtcctgtgttatactttttccttttatatgatgtgtttaaagctagctaaactttatctgatattctgttgcagtaagagtgttcaccagcatccaggagaagactcccttaagtggtatccttttagttctgattacatacattcttaaggatcctatttttctactttcttccaagtgtgcatattattatataggtgcattgcatattgccgacaaatttctttctttaccctaatacatgatagtttcagaatttctttaatgaaaaaaagagcctatagaatcatcctacttgtcagttcattctattaaaatcctccatagttcagttgatctgaaaaaaccgctcaacttgaacatgcttttctcaaagaatacggtactgtcagtgtaacattgatacttgtcaatttgctgccttgctggtattgtacatcagcaaaagagttttccataaatatttgcctacttgctactccctccgttttttaatagatgacgccgttgactttttctcacatatttgaccattcgtcttattcaaaaattttatgcaatcgtataagatataaatcacacttaaagtactatgagtgataaaacaactcataacaaaataaattataattacgtaaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacagcgtcatctattagaaaacggaggtagtaatattttgtacccttaactccttgaaagtgatactgggatctgcaattggcattgtgatgaatggtacgctcttgggtcagatagtgttgtaccagaagcctgctccaaagaaagagaagaagagagattgagcacaactgcacaacacaagaaaaggcagaatgttcatctctgtgtccatcttcagacaagcaaaaggctccagtgtatgaatttcttgcagagtcgtgtgatgatgaaaaacgatgggcaccatatacagactagatatggatatcttgcgtacttagttttagcatttagaagtgtcatgactgatgttagattattgttagattgctgtactgtgcaagctactgacagtggaaaaactgttctcttaactctatgtttgagactatttttttatcgtctgtttatttttcaggcataaatattgtaagcacggggctacatacaaaatccagaaagttgtttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0479200, RefSeq:Os07g0479200