Os07g0479400

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0479400| Description = Similar to Neuroendocrine differentiation factor| Version = NM_001066170.2 GI:297607209 GeneID:4343227| Length = 414...")
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Gene Name

Os07g0479400

Description

Similar to Neuroendocrine differentiation factor

Version

NM_001066170.2 GI:297607209 GeneID:4343227

Length

4148 bp

Definition

Oryza sativa Japonica Group Os07g0479400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18081459..18085606

Sequence Coding Region

18083108..18083233,18084936..18085012,18085383..18085494

Expression

GEO Profiles:Os07g0479400

Genome Context

<gbrowseImage1> name=NC_008400:18081459..18085606 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:18081459..18085606 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaaggtgaagggtctgctgaagccgcggccgacgccgcagcagcagctgcgggagtggcagcgcaagctccgcaacgagtgccgcgtcctcgaccgccagatccgagatgtgcagagggaggagaagaacgtggagaagtctatcagggaggctgcaaagcgcaatgacattggatccgcaaaggctcttgctaaggaactagtgaggtcaagacgtgctgttaatcgtctctatgaaaacaaggctcaactaaattcagtatcaatgcatcttggagaaattgttggtatgttctttttctttttatga</cdnaseq>

Protein Sequence

<aaseq>MEKVKGLLKPRPTPQQQLREWQRKLRNECRVLDRQIRDVQREEK NVEKSIREAAKRNDIGSAKALAKELVRSRRAVNRLYENKAQLNSVSMHLGEIVGMFFF FL</aaseq>

Gene Sequence

<dnaseqindica>2374..2499#595..671#113..224#tttcccttttccctttcctcgctcctcgtcctgtctggctgtctctcctcctccccgcgtggcggcgtcggtagataccgcgtgattcatccggcggcggcgagctccgccgatggagaaggtgaagggtctgctgaagccgcggccgacgccgcagcagcagctgcgggagtggcagcgcaagctccgcaacgagtgccgcgtcctcgaccgccagatccgaggttcgctcccccatctcctcctcctcccccgacgcgcgacccgaccttcacgcgaggtctttgtctaggtgtgttctcttccatatgatcgggggggggggggcttatacttctgaatcgggcaagattgttttccttgttggtgcctctgattaagccggctgcggtaaacatttgcgttgcctcagcgagcaaatcgcgggcttgattagcgttagcagcgcccgtttctgcgatcgctgggacaaattcctaaccatccctctcattcgtgccacatatgttgtttattaatactagtcttgtgttcgtagatgttctcgtgccacatatgttggtaattagtagtgtttgtctcttgtgttcgcagatgtgcagagggaggagaagaacgtggagaagtctatcagggaggctgcaaagcgcaatgacattggatccgcaaaggtgtgctgtactaatcatgctgcttttgcttaagcactccggtttgtaaattgtgatgcagtacacacgaacatcattttttttacccccttctgtatatgcctatatggctggttggatcccattcgtcagttaatgcaagtttaaagttgatttaattttattacgttgagcaaaatgctgctcatttggctttgcaaacatcgaacctggtaggggaatgtggacactgcttagattgtaattgttcgctaaaacttttggacctaccatgtgctatacctcaggtgctcagaaccatgtcgctttgatctcattgacatgtggaatacacatactatttttttctttctgctgtttagttgctatccaactatgaacaacgtacccttttggtcttgtatcccacaatggtaagttagagagtaactgtgagcgttatcctgactcctccgacctttgttccatgtcatttgatgttagctgcaggatgcattattgacatactcatgtgaagcttgctaagaaaaccaaagtctggattgataaaataaaattccatttagaagttcaacaattcagtaaaatgattttagaatgaacagcacatgagtatatgacttgatgagtaaaatcgtaaatattcttattcccagtaaagcatgccttgtcatgccttgtgccagagcacaaactgtagcagtggttgactggaggctttggtctgtagccgccaaccagggccacggtgaatagtagctgttgtcatgggataagcatgcacatggtacacgagaagaacagaaacagaggaagggggagattagctatttgcttgtttgagtaacttaaattcttcaggccacttgtaaagaggtgtgctgatcctaacaatgcgaaactaaatctgatagcttaccattggactagtaaactgaatcaaatggataatggttggagccaagatggagctgacatcattgggccttggcgctatgcctggtgcaggaacagtcccacatggcataccataaatgcatactatgactgtatgatatcattcttttaacttccatgtttttttacagtaggaattgacatagtaatttagttgcactagagtgggtccatgtgtatgttggtcgattgagacaaaacatcagtgtacatgcatccaaaaccataatggtataatcacaaatttactaaatcctagataaatggttggttccacttctctattgttttggtttctatttttcatgcacttcacaatataaaaggctaatttcttaaaatttttattctatttatgttgtcactttctctttatgttgtcttgtggtatatgtgtctccatttatcttgcaattactactctgatgttaatacacatgtagagttctcttgggttatgatgtttcttgaacactcaagtactcaactcattctgtatacacagatctgtccatacacttttcaattgttacaatgttacatagggtaaattattagttcctgaaagctctcccattaattttcatgatgagcatgcactagttcttatacatcaatatatgtttttgtcccacatatgatgttgagagtttcagacattatccagtgccaagtttttacagttggcagagtaaggtgaagacctttgtactgttgatgtgaatatttcatttttatatgtcaggctcttgctaaggaactagtgaggtcaagacgtgctgttaatcgtctctatgaaaacaaggctcaactaaattcagtatcaatgcatcttggagaaattgttggtatgttctttttctttttatgagctgatagagaggatttattagcaattcagcctaaccttcatcgtatcagcccacaagttccttgcaggcaattacattacaatctgttagagctaactgaatttcttcactacttatctgttcgcgctgatactggactggaatactgaaaggattcagtcacagtttaaattgaaatttgcatatgccactgaaaagttttatccctttgtaattaaaattcggtgcctcactggtatgtaggatctcacccacctcataagcacctgattgtaacattttctacagaattggaacataaaattgttaattttggacttgttttagtaactgtgtagcacctgacaaaatcagtttctgtgctcatgtcatttgatatgtaatgcagtatattttataaaggtttgcttgttagttgttagcatgtgagtgaacttaggtcgaagccaggaatgagagaaccattcttgttaccttaatacatttcacttccgttctgttgagatctccaaacatgactaaggagtagtacttcatttatttgttttgtttattacaaactattaacttctgttcatgcaatttcagcaacggcaagaactgtcggtcatctgtcaaaaagtgctgaagttatgaaaatcgttaacaatctaatgaaagctccagaattggctgccaccatgcaagaatttagtaaagaaatgacaaaggtaatccgctatttctgttttcttagttcaatatgtaccatatcaaccatctcttccatttcttgtgcatagtttaaagacgtcaggtctgttactctgcactgatattgatctttgtgttaaactggcaaactgatcattgagccatgtgcttgaactcactgacctttttgcactctaggctggtgtgatggaagagatggtcaacgatgcagttgattcagctttggactctgaggacatggaggaggaaattgaagaggaggttgacaaggttcttgcttcagtagctggggagactgcctcacagctacccgatgctgtgaggaaacagaggataaaccaagcttcaacaagcagggtcccagaagaggtagatgcttcacacttttgtttgtgcgttttgttgttaggatggcatgaaaaatcaactgtgcaaaatagtagtcctccagaagctatttactggaaggttgcttttgagtagttaagctgtcctatatagacagcaacatccttattgtagtcacttaataatactaaaatgaatagattcgtaaactccagcaattttatctgacaaaaatatccttttgttatggaccattttattatttaaattattaagagcaattatgtttctttttctattttgtagcgacaagctgttgctgagggcgctgatgatgatgaggaagatctggaagagatcagagcacggcttgctaaagtgaggtcataacattctaactttgggagttccctagataacatccagaccaatctatgatagattggcctcggttgaccaagtttgaactagcaatgtactgttgtatacttgtatagtaaacatcctgtatcttgatctgtctagagacaaaaaaaaatgaataatgtaatctcctggtggctctatcgagtatcgacttttgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0479400, RefSeq:Os07g0479400