Os07g0480900

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Revision as of 08:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0480900| Description = Similar to Cysteine protease (Fragment)| Version = NM_001066174.1 GI:115472080 GeneID:4343231| Length = 1501 bp| De...")
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Gene Name

Os07g0480900

Description

Similar to Cysteine protease (Fragment)

Version

NM_001066174.1 GI:115472080 GeneID:4343231

Length

1501 bp

Definition

Oryza sativa Japonica Group Os07g0480900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18156660..18158160

Sequence Coding Region

18156679..18157266,18157353..18157895

Expression

GEO Profiles:Os07g0480900

Genome Context

<gbrowseImage1> name=NC_008400:18156660..18158160 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:18156660..18158160 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctgcacctgcacggctcgtcgtccttgtcctcgtggcggtcgtcgtcgtcgtcggcggcgacggcgacgccggcgtcatccggcaggtgacggacggcgggtactggccgccggggctgctcccggaggcccagttcgcggcgttcgtgcggcggcacgggcgggagtactccgggccggaggagtacgcgcggcggctgcgcgtgttcgccgccaacctcgcccgcgccgcggcgcaccaggcgctcgacccgaccgcgcgccacggcgtcaccccgttctccgacctcacccgggaggagttcgaggcgcgcttgacgggcctcgccgccgacgttggcgacgacgtccggaggcggccgatgccgtccgccgcgccggccacggaggaggaggtgtccggcctccccgccagcttcgactggcgtgacaggggcgccgtgaccgacgtcaagatgcagggcgcgtgcggctcctgctgggccttcagcaccaccggcgccgtcgagggcgccaacttcctcgccaccggcaacctcctcgacctcagcgagcagcagctcgtcgactgcgaccacacgtgcgacgcggagaagaagacggagtgcgacagcgggtgcggcggcgggctgatgacgaacgcctacgcctacctgatgagctcgggggggctgatggagcagagcgcgtacccatacacgggcgcgcaggggacgtgccggttcgacgccaaccgggtcgccgtccgcgtcgccaacttcaccgtcgtcgcgccgccgggcggcaacgacggcgacggcgacgcgcagatgcgggcggcgctggtgcggcacggcccgctagccgtgggtctgaacgcggcgtacatgcagacgtacgtgggcggggtgtcgtgcccgctggtgtgcccgcgcgcgtgggtgaaccacggcgtgctcctcgtcggctacggcgagcgtgggttcgcggcgctgcggctgggccaccgcccctactggatcatcaagaactcgtgggggaaggcgtggggggagcagggctactaccggctctgccgcggccgcaacgtctgcggcgtcgacaccatggtctccgccgtcgctgtcgccccgccgccgccgtga</cdnaseq>

Protein Sequence

<aaseq>MAAAPARLVVLVLVAVVVVVGGDGDAGVIRQVTDGGYWPPGLLP EAQFAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTRE EFEARLTGLAADVGDDVRRRPMPSAAPATEEEVSGLPASFDWRDRGAVTDVKMQGACG SCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTECDSGCGGGLMTNAY AYLMSSGGLMEQSAYPYTGAQGTCRFDANRVAVRVANFTVVAPPGGNDGDGDAQMRAA LVRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNHGVLLVGYGERGFAALRLGHRPY WIIKNSWGKAWGEQGYYRLCRGRNVCGVDTMVSAVAVAPPPP</aaseq>

Gene Sequence

<dnaseqindica>20..607#694..1236#ctcgatctctcccaccaccatggctgctgcacctgcacggctcgtcgtccttgtcctcgtggcggtcgtcgtcgtcgtcggcggcgacggcgacgccggcgtcatccggcaggtgacggacggcgggtactggccgccggggctgctcccggaggcccagttcgcggcgttcgtgcggcggcacgggcgggagtactccgggccggaggagtacgcgcggcggctgcgcgtgttcgccgccaacctcgcccgcgccgcggcgcaccaggcgctcgacccgaccgcgcgccacggcgtcaccccgttctccgacctcacccgggaggagttcgaggcgcgcttgacgggcctcgccgccgacgttggcgacgacgtccggaggcggccgatgccgtccgccgcgccggccacggaggaggaggtgtccggcctccccgccagcttcgactggcgtgacaggggcgccgtgaccgacgtcaagatgcagggcgcgtgcggctcctgctgggccttcagcaccaccggcgccgtcgagggcgccaacttcctcgccaccggcaacctcctcgacctcagcgagcagcagctcgtcgactgcgaccacacggtacatcacaaatcacatcacacgcacacgcaacactcctaatctcatctctgaactaatcgagatatggctcgtgatcgttgaagtgcgacgcggagaagaagacggagtgcgacagcgggtgcggcggcgggctgatgacgaacgcctacgcctacctgatgagctcgggggggctgatggagcagagcgcgtacccatacacgggcgcgcaggggacgtgccggttcgacgccaaccgggtcgccgtccgcgtcgccaacttcaccgtcgtcgcgccgccgggcggcaacgacggcgacggcgacgcgcagatgcgggcggcgctggtgcggcacggcccgctagccgtgggtctgaacgcggcgtacatgcagacgtacgtgggcggggtgtcgtgcccgctggtgtgcccgcgcgcgtgggtgaaccacggcgtgctcctcgtcggctacggcgagcgtgggttcgcggcgctgcggctgggccaccgcccctactggatcatcaagaactcgtgggggaaggcgtggggggagcagggctactaccggctctgccgcggccgcaacgtctgcggcgtcgacaccatggtctccgccgtcgctgtcgccccgccgccgccgtgatcgattgatcgatatcgatcggccgccggcgatctcacgttaccgatgtgttatgtgaagtacggagtactactgtatactggatgtgcttgattaaagctttgcttggttagcggtgggagacgtggcggtagtaggtgcttagtactacgttttacaaatggttttacatagttgggttgtatgtcgatctactactagtgaatacagaataacaaaaagttatggacgtgtacattaagctagggtatattgaagtcatctt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0480900, RefSeq:Os07g0480900