Os07g0495000

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Revision as of 08:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0495000| Description = Cupin, RmlC-type domain containing protein| Version = NM_001066227.1 GI:115472186 GeneID:4343286| Length = 5148 bp| ...")
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Gene Name

Os07g0495000

Description

Cupin, RmlC-type domain containing protein

Version

NM_001066227.1 GI:115472186 GeneID:4343286

Length

5148 bp

Definition

Oryza sativa Japonica Group Os07g0495000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19170156..19175303

Sequence Coding Region

19170239..19170434,19171018..19171105,19171185..19171261,19171581..19171620,19171846..19171912
,19172645..19172730,19173117..19173198,19173515..19173571,19173872..19173910
,19174139..19174209,19174649..19174702,19174785..19174857

Expression

GEO Profiles:Os07g0495000

Genome Context

<gbrowseImage1> name=NC_008400:19170156..19175303 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19170156..19175303 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgctcccccggctcctcctcctcgtcgttgcctccgcgctgccgctcgcttccgtcgctgcgggcgccgtcggcgtcggcgaggggttctgctcggcggagccgtcggcggcgtcgggcggctgctccggcgtgcggccgccgctctactggaaggccaccaacccgactctggcgcccgcgcacctccaggatttacctggcttcacacgtagtgtttacaaaagggatcatgctttgattacaccagagagccatgtattcagccctttgcctgactggatcaacacattaggagcatatttaattagtccagctatcggggcacatttcacaatgtacctggcaaaaatgcatgatggatcaaaatcagccctaccaccaaaaggtgttgaaaggcttatctttgtactccaaggaagcattctattgtctgaggagagtgggaatacccatactctgctggtggactcttatgcctatcttcctgcaaacatgaaacactctgtgatctcagatgaagtaactacccttgtaatctttgagaggaggtacacaaccattgagggttaccatcctgatctcattgttggatcaactgataagcaaccccttcttgaaaccccaggagaggtatttgagttgaggaagctgctacccacttctctgccttatgactttaatatccatataatggattttcagcctggggaatatcttaatgtgaaggaggttcattacaatcaacatgggttgctgcttttagagggacaaggaatataccgattgggagacagctggtacccggtgcaatcaggggacaccatttggatggcaccgtttgtgcctcaatggtacgctgcccttggaaaaaccaagacgaggtacttgctgtataaagatgtcaatagggatccactgatatga</cdnaseq>

Protein Sequence

<aaseq>MMLPRLLLLVVASALPLASVAAGAVGVGEGFCSAEPSAASGGCS GVRPPLYWKATNPTLAPAHLQDLPGFTRSVYKRDHALITPESHVFSPLPDWINTLGAY LISPAIGAHFTMYLAKMHDGSKSALPPKGVERLIFVLQGSILLSEESGNTHTLLVDSY AYLPANMKHSVISDEVTTLVIFERRYTTIEGYHPDLIVGSTDKQPLLETPGEVFELRK LLPTSLPYDFNIHIMDFQPGEYLNVKEVHYNQHGLLLLEGQGIYRLGDSWYPVQSGDT IWMAPFVPQWYAALGKTKTRYLLYKDVNRDPLI</aaseq>

Gene Sequence

<dnaseqindica>84..279#863..950#1030..1106#1426..1465#1691..1757#2490..2575#2962..3043#3360..3416#3717..3755#3984..4054#4494..4547#4630..4702#gcaaatcccccccaaaaaaaaaaaaaacccgccaccgcgagcacgccgcgcgcctgcttcctccacctgcgccgggcgagaagatgatgctcccccggctcctcctcctcgtcgttgcctccgcgctgccgctcgcttccgtcgctgcgggcgccgtcggcgtcggcgaggggttctgctcggcggagccgtcggcggcgtcgggcggctgctccggcgtgcggccgccgctctactggaaggccaccaacccgactctggcgcccgcgcacctccagggtgagtgagcgtgaggcggagcgatacgtcgcgagttggatggaatcttaaagattattgcataaataggtgctctggattgcgtcactgcagtgtttttttagaactgcaatatcgtgatattggttctggatttggagttactgttgtggagtatggatgttgatgctggttgagacgctcgggatagtgtttagttcgttcagtttcacgatgataccatactctctagaaggaatttctctgtgaatggtgtggcttgctgtcgagaattaggctgtgaactaggtaggtagtagtaggtagtcatgtgggactgaaatagaatggcatatgatatgcacgctcgtcagttactccttttcgtcgaattggattggccgagaagattatcttgtattcccttgctaagcacactttaaagataatttatgttttatgcttctgttttacttattacacggtgaatgaggatatcttctgagctattttatcgtttactcatgtaggctatctgtgtttcagaagaggatgcgttccttttcctgttcctgctaattttgttacttttctgtatctccagatttacctggcttcacacgtagtgtttacaaaagggatcatgctttgattacaccagagagccatgtattcagccctttgcctgactggtattggccaccttctgttgtactttctctttgctttccacaactatgtaatatcatttatttactctttttttttcaggatcaacacattaggagcatatttaattagtccagctatcggggcacatttcacaatgtacctggcaaaaatgcatggtatgcaatttctcccacctacaaagcataggtagaaatgtaaatgatagcagaatattcaacaagttctctttgaggtccgagtttggtttctattctaggaattcagaatattttgtttgccacagaaccattggattagcaagaacatttttttttgtgtgtgtggattcatttcggccattgggccaagaatgcctagctcccaattaaaagcttgtattcttattattgtacatcggtacatgttgtgttcaatcttatcaaactaatctgttgacaagatagagagttcttattttatatgttttatttgcagatggatcaaaatcagccctaccaccaaaaggtgttgaaaggttcagtgcttctcacttagttagaatagcaaccattcacacttgtaatcatcactgtttcaaagaacagaatgattgggtcactcctagtcctagccaataaatgttgactgtgatgcacatccaattaagtagctcatttgtcagcatcctatacttgactcgacttggtttttcaccatccagttaatgggtttccactggtccatggtaaacaattttcaggcttatctttgtactccaaggaagcattctattgtctgaggagagtgggaatacccatactctgctggtaagattcgatcaaacttagtatctgctattttgtgaatatctagttattttttcactatactctatgttcgtcgtattatgtaagtgttaatccactttaaacatttctaattccatgacataacttgatgggatcatacgacatagttttcaaagtttagaggcagcctaagccaactgcggttgacaatatttttaattgcatgaagatgatttacaaaatgtgcatgggctttttaagatcatttctaatcattactaaggaatacctgaagaatagtatcaaccatgttcagaaattccattgtagttgaatgagattttgcgacatggtgtatccggatttgtctattcctgcttctgttgttatattggcataacatgtttgaacataatgcaaattaaacttatggatgatcagttgttaaatttgtagggtgatgttattaaaattttgtcaaaagacaataatataaatattatacatgataaaagggtactaaatatgggatactgatgtttgtaaattcaacagaatttccattgtttgtcataactgaatgaatggaactcccacttgtttcttgcatactcctgcagtaaatggcttaattcttttcatgatcctgatacttgattgttttaacttgatcatcttttaccagctttagagaagtaaaggttgcctagcattaatatggtttactgattgtgtaattgctgagtgcaggtggactcttatgcctatcttcctgcaaacatgaaacactctgtgatctcagatgaagtaactacccttgtaatctttgagaggaggtacaatggttaaatggcacactttcatgtaaattttgtttgttttttaccactattttttttagggaatgcgcataatccatgcgcatcatttgttttaagaatttttaccactattattgacctagctgactagctgagtgatcttattgaatagctgaagttcttcccattttggtaggcttttagtcgctaagactggattaacttttgcaatataaatggattggcttaaggccaattaagtggttgatgaacagtatttttcctttgtcttctttttgttgtgaatatgatctgcacatctcagacaattattgttttccgtcaatgatttagttttctcagtttacatttctcattatttaatgaatatatttgtttaggtacacaaccattgagggttaccatcctgatctcattgttggatcaactgataagcaaccccttcttgaaaccccaggagaggtacattctggacctgtgtggtggataccgattatttgcaatctctaggcatctagataaattggtttgcctgccatttgagtggtacgcctttaatttatactatgcattttcaagagggttggaataaactggtttcagttttcaatttatatcatttggccttgtgttgccaatattgtagagtttttgctgtgacattcatatagataattgctgttttttcccctgctacagacaatattgtagtactgttttttgctgatatatattctgcaagcacttacatgaaattcttgcctcttttttccaataggtatttgagttgaggaagctgctacccacttctctgccttatgactttaatatccatgtaagtctgattaatttgggtttattgtttaacttggtgtgtataacatcattccactgaatgtgagtgcccataaatttcggcaaaccaagcattagattcaagctatttgttctcctagttattcattgaaataagtgtaataagctattgtgttgtataagaactcaaactctgaaacactggcaacctgagcttgcaaaagtcattacttatcagagtctttaaacttattcgtaggttatttctagactacaaaggagctaaactttttctgatatccttatttctcacttgcagataatggattttcagcctggggaatatcttaatgtgaaggtttgtgaatattttaatatttcttaggagatttcagacctaatgtgctagtaccatgttttaaaccgtgttcatattttaattgtctattagattaattacaaaggggctcccaccagaaaatctgcaatgtgtgaactacattcttggtcatgtcactagtgactagccactatgcacccatcacattctgaagctgctttttttttgggggttaattataaacaggaggttcattacaatcaacatgggttgctgcttttagagggacaaggaatataccgattgggagacagctggtaaggatgtgatctaaaacatttccttttttgtattattcttttttttccttttaggctttatttggttgtgcaacgttcagacttcagagtcccaggttcccagccttgtttcctcctgggacaagctgtttaaggaagatatcataatcttattttaatataagttctagaagatgtgtactgagtactgtatatagattaacggctcattattgagcttgacatttacaaaatatgggtgcgtatgagcctaatctacttcatggcactattgtcatgactcatgtgtttctgcttccatccactgtcctcaacatttttttagaggccgcccttcacatctaagtatatgctttactgacagttgtaacattatagactatattagtctcctacttagctgattactgaatatttgttctgtttgctaatacaggtacccggtgcaatcaggggacaccatttggatggcaccgtttgtgcctcaatggttagtatctgtcaacatagtgtttatcattcatggaattggcttttgtaggcagctcatcaccgttgccttgctgttccaggtacgctgcccttggaaaaaccaagacgaggtacttgctgtataaagatgtcaatagggatccactgatatgaggaatgcaacatttcctgaccgatggtaatagatcaaattggagagctattacgctggtcttgaagagtccctgtggaagatgatctcagaaaaaaataaatcttctttctcgctgatgaacccttcaaaatgatgaatcgacgcaagaatctcagatctgtacatggaatggtcaagctacccacttgttcttattggtcaatatgaattcagaaaaaaagttgctgtactattttctggacagaactgggctatgctgtgactcttcggaaatctgtattggctaaccccttgaaatgtcgaaataatgcgtcgctgtaatgaaaccaggtacctgattccaagattagtgcctttttttttccttttaattgcagagcatcaaatatgtggcgacatgtcgaacatcaatgtttgggtatctgaagatgccttttaaaaatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0495000, RefSeq:Os07g0495000