Os07g0496000

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Revision as of 08:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0496000| Description = Similar to Nt-rab6 protein| Version = NM_001066234.1 GI:115472200 GeneID:4343293| Length = 3874 bp| Definition = Or...")
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Gene Name

Os07g0496000

Description

Similar to Nt-rab6 protein

Version

NM_001066234.1 GI:115472200 GeneID:4343293

Length

3874 bp

Definition

Oryza sativa Japonica Group Os07g0496000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19239053..19242926

Sequence Coding Region

19239449..19239595,19239786..19239876,19241076..19241187,19241419..19241507,19241605..19241675
,19242583..19242699

Expression

GEO Profiles:Os07g0496000

Genome Context

<gbrowseImage1> name=NC_008400:19239053..19242926 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:19239053..19242926 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccccgtgtcggcgctcgccaagtacaagctggtgttcctcggcgaccagtccgtcggcaagaccagcatcatcacccgcttcatgtacgacaagttcgacaacacctaccaggctacaatcggtattgacttcctgtcaaagacaatgtaccttgaagataggactgtcagactgcaactttgggatacagctggtcaggaacgattcaggagtttgattccaagctatatcagagactcttccgttgctgtcatcgtatttgatgttgcaagcagacagtctttcctaaacacttcaaaatggatagaggaagttagaactgagaggggcagtgatgttatcattgtgctggttgggaacaaaactgatcttgttgacaagaggcaagtctccatagaggaaggagagggcaaagcgaaagatctcggtgtgatgttcattgaaaccagtgctaaagctggttttaacattaaggcgttgttccgtaagattgcggctgcacttcctggaatggagaccctctcatcagcaaagcaggaagacatggttgatgtgaacttgaagtcaagcaacgccaactcatcccagtctcaggcacaggctgggggatgcagttgttag</cdnaseq>

Protein Sequence

<aaseq>MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGI DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSK WIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIK ALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNANSSQSQAQAGGCSC</aaseq>

Gene Sequence

<dnaseqindica>3332..3478#3051..3141#1740..1851#1420..1508#1252..1322#228..344#gcgcatcgctcggtcttccttccttccgtccgtccgcggggcacaaacgcacccaccacccccccataacgcgcgagatcccctctccgccccccctctcccgatccgccccgccggatcccgccccgccccgatccgatccgacctagcccgcctcgccgccgccgccgtcgccggccggagaagggaggaaggagaaggagaaggagaagaagaggaggcacgagatggcccccgtgtcggcgctcgccaagtacaagctggtgttcctcggcgaccagtccgtcggcaagaccagcatcatcacccgcttcatgtacgacaagttcgacaacacctaccaggtgcgttcttcttctctatcggtttcgccgtctgctcgcctctcttcggggggttggggttggatctgatcgggggccagatccggcggtggcgccctggccggccggccggccgatctggaggagaggcggttgggattggatctgtgtcgtgggttggccgctgactcggtcccgtggcggtggtggttttggtcttgttgattatttggacgtgatcctctctgctagtgaagttgaatcagcagtatctcgtgtgcgcgggtgatgtgatggtgtcaagcaaggcgtgatctcggcggccttgaggagagcgagcaattaagcctcgatcgatggcatggcgggatccaagtgcagccccatgatacaaatttacagatttacagggagcttaacagtaggcaatttcaacgagaatgggctgctgcattcagaatgtggtctttggatattgaacttgggattggaaagcagggaacatgagccttgtgaatgtggtttttcttcagctacagggcattgtggaattcgtttgggatctgggattgcaatttttctctgctagattgcacatgccttgtgaccggcgcacttatgccatgctgtagacaagattggggatcatctgttttcacattattgtaccacattgagacatccgtattcggaatggtgtctggacgccttttgatacatcgaaaagatgtccttcctcacgagggctatttctattctgtatgatggtgggaatgatgatgctgtcattatactattgcacgcttattttgagcattatatgtcactgcaatgtttcagttttaatacttatcttaaaatgtttcagttttaatacttatcttatctggtcgttatgttctcatgatttattctattttgcgaacaggctacaatcggtattgacttcctgtcaaagacaatgtaccttgaagataggactgtcagactgcaactttggtatgatggcatcttttgctgcatttccagttagttgttctactccttgggaatcggcaggcattatcttatgcattttgtatttttttttctgcagggatacagctggtcaggaacgattcaggagtttgattccaagctatatcagagactcttccgttgctgtcatcgtatttgatgttgcaagtatgttctctcatctccatgtgcgcacatgggtggcatgtgtgttctcactaactgcttttatactagcaacaatgcagcagaccaacagagaattgccaagcaaatttgatggcacatgtcaacaaattatgatttttaatagcaatgtcatttttaattcgttttgcattataaaagctctttcctatcctgcctcctttttccttaaatttgttttacatgctgtaggcagacagtctttcctaaacacttcaaaatggatagaggaagttagaactgagaggggcagtgatgttatcattgtgctggttgggaacaaaactgatcttgttgacaagaggtgagtggagttcaaaaaaattcttgttttctttagccctttcctgttatcttgcttatctgatgattttgctgttaataatgatcctctttaccttctggattttacttggtgaattttattttgcagcagtttcatttgaatgcccttgtttctgtatgatgtcagattttgttcaccatatgctttatgtgttactgttagtggtgtactggtgtttaccaaacatttcatttatttgtctcatgtaagacattactgaattatgatttctagaaatgcattctaccagggttagtagagtaaaattaagtgcaatacctgctgccttaatttttttagttgggttcccaaccaatatttctatatgatgtcaaatttatttctctagatgtctttgattttatggtgtttaccaaacaatgcaatcttattatgtaagatagaactgtatatttacttttgatatgcagttattacgcgatgattgaacagtacgataatttagcacaaaactcactaccttataattttagttggatcaagctcaaggtttgtgattcaaaacaatgccatgtaatgtgagtgtatgataaaatgttgacctatgcccacttgttattggcattgttatgaactacaaactgtaggctcacatgtgtctaaaagtctgtttaattctagatatttccttgtttcatttatcgctaaacagataaccacaacatgtgtgattcaggaaaatttctgtcaggtccctaaaaaagtcagaccttgctataattccaaattatcgtggcaatttccattttttaggcaccacttgttgtggcattggcgattaagatacatcaatttgtggcatcagtgccagttcttaaagccaatcttgttttggtgtgaatttttggaataaaatgtgtatggccagagcttcatatttcatgactgcagcttctgtgctctttaatattattttccatgatagtttaagctgacattcattttgaatctctcagtttaattttaaatattatgtgataacttatttcttgctgttgcttttgtgctggtggactcatttcctgctttagcttcattagattaaatatcatcgatctccataaatttttatgtaaaatgtatatattgttgagtgttgctgtcaattttaagtcatgtactttctcatgcaacaggcaagtctccatagaggaaggagagggcaaagcgaaagatctcggtgtgatgttcattgaaaccagtgctaaagctggttttaacattaaggtgtgcttaggaaaatataaatttcttgcatatcctttgtattacatcaggagattagcacgcgtgtagatctggcacattttcagaaagttcaaaatcgtgttcttttatttgggagatgctgaaatctgaattatttatgggttacatggggataatttgttctgacattttttctcatgctgatcaggcgttgttccgtaagattgcggctgcacttcctggaatggagaccctctcatcagcaaagcaggaagacatggttgatgtgaacttgaagtcaagcaacgccaactcatcccagtctcaggcacaggctgggggatgcagttgttagcttcagtcccctaacacttactgcttcgcggtctcaaggccccccatgcctctttcaccaaaagcatcagtactgcttgtctgaggggaggagagttaaattgtcgtctcatgccagtgaatccgaccgagtcttcgattcggtcgaacgaaccatttgcattggaaaaagataacgttttatgagtttctaccattttctcagtggcctaaagctagcaacagtgtatagttgggttggcactgtgaacttctatctcttgagttgggtatttagaagttagtgattgttttaagttcatcctctatatattttcatctcccatcttgtcacagttagcctcagtaatgttttctatggtgtaccgaacatatattggaatttttgtaagcttac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0496000, RefSeq:Os07g0496000