Os07g0509800

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Revision as of 08:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0509800| Description = Similar to APS reductase (Fragment)| Version = NM_001066285.1 GI:115472302 GeneID:4343348| Length = 2900 bp| Defini...")
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Gene Name

Os07g0509800

Description

Similar to APS reductase (Fragment)

Version

NM_001066285.1 GI:115472302 GeneID:4343348

Length

2900 bp

Definition

Oryza sativa Japonica Group Os07g0509800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20070447..20073346

Sequence Coding Region

20070447..20071500,20072678..20072993,20073289..20073346

Expression

GEO Profiles:Os07g0509800

Genome Context

<gbrowseImage1> name=NC_008400:20070447..20073346 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:20070447..20073346 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccgctaccgcttccatctcgtcccactccgtcgccctccgcgacctcaaagctgcgaggattggagccgtgaagcagcaggtggccgcggccccggcggcgggcacggcggcggcgagggcccagcgcgcgagggcggtgcgcccgctgcgcgcggcggagccggcgaggcagcccgtctccgcctccgcggcggcggcgccggccgccgcgcccgtggcggaggacgccgccgccgccgccgtcgacgcccctgctccggccgtggactacgaggccctggcccaggagctgcagggcgcgtcgccgctggagatcatggatcgggcactcgccatgttcggatccgacatcgccatcgccttcagcggggcggaggacgtggcgctgatcgagtacgcgaagctgacggggcgtccgttccgcgtgttcagcctggacacggggcggctgaacccggagacgtaccagctgttcgacaaggtggagaagcactacgggatccggatcgagtacatgttcccggacgccggcgaggtgcaggcgctggtgcgcgccaagggcctcttctccttctacgaggacggccaccaggagtgctgccgcgcccgcaaggtgcgcccgctccgccgcgcgctccgcggcctcagggcctggatcaccggccagcgcaaggaccagtccccgggcacccgcgccgccatccccgtcgtccaggtcgacccctccttcgagggcctcgctggcggcgccggcagcctcgtcaagtggaaccccgtcgccaacgtcgacggcaaggacgtgtggaccttcctccgcgccatggatgtccccgtcaacgccctgcacgcccaggggtacgtctcgatcgggtgcgagccgtgcaccaggcccgtgcttcccggccagcacgagcgggaagggcggtggtggtgggaggacgccaaggccaaggagtgcggcctccacaaggggaacatcgacgaccagggtggggcggcggcggcggcggcgcacaaggccggcggcgccaacggcaacgggtcggccggcgcgccggacatcttcgagagcagcggcgtggtgagcctcacccgcgccggcgtcgagaacctgctccgcctggagagccgcgcggagccgtggctggtggtgctgtacgcgccgtggtgccccttctgccaggccatggaggcgtcctacctggagctcgccgagaggctgggcggcgcgggcggcggcgtgaaggtgggcaagttccgcgccgacggcgagcagaaggcgttcgcgcagcaggagctgcagctgcagagcttcccgaccatcctcctcttcccgagccgcaccgcgaggccgatcaagtacccgtcggagaagcgggacgtcgactcgctcctcgccttcgtcaacagcctccgatga</cdnaseq>

Protein Sequence

<aaseq>MASATASISSHSVALRDLKAARIGAVKQQVAAAPAAGTAAARAQ RARAVRPLRAAEPARQPVSASAAAAPAAAPVAEDAAAAAVDAPAPAVDYEALAQELQG ASPLEIMDRALAMFGSDIAIAFSGAEDVALIEYAKLTGRPFRVFSLDTGRLNPETYQL FDKVEKHYGIRIEYMFPDAGEVQALVRAKGLFSFYEDGHQECCRARKVRPLRRALRGL RAWITGQRKDQSPGTRAAIPVVQVDPSFEGLAGGAGSLVKWNPVANVDGKDVWTFLRA MDVPVNALHAQGYVSIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGNIDDQGG AAAAAAHKAGGANGNGSAGAPDIFESSGVVSLTRAGVENLLRLESRAEPWLVVLYAPW CPFCQAMEASYLELAERLGGAGGGVKVGKFRADGEQKAFAQQELQLQSFPTILLFPSR TARPIKYPSEKRDVDSLLAFVNSLR</aaseq>

Gene Sequence

<dnaseqindica>1847..2900#354..669#1..58#atggcttccgctaccgcttccatctcgtcccactccgtcgccctccgcgacctcaaaggtgagaatttcttgctctcgatctccgctccctcgcgcatccaagctcgccgttcgtaaaaatttagccgaatttgagtgtttactgtggaattgaagtttgcaagcttgaggattactctgatgagctccaatatcgtccaaaaaatcgggaattaactgctgatttgctcgttcaaaaatttctcccagcgaaatgcgttgttttctctggggattcatcctcatttgaggcgagaattatttgcttataaaaattcctctctgtattccgttttttttttttggctgtgcagctgcgaggattggagccgtgaagcagcaggtggccgcggccccggcggcgggcacggcggcggcgagggcccagcgcgcgagggcggtgcgcccgctgcgcgcggcggagccggcgaggcagcccgtctccgcctccgcggcggcggcgccggccgccgcgcccgtggcggaggacgccgccgccgccgccgtcgacgcccctgctccggccgtggactacgaggccctggcccaggagctgcagggcgcgtcgccgctggagatcatggatcgggcactcgccatgttcggatccgacatcgccatcgccttcaggtactacattactcgttgccggatggatccgtacccgttaatttcgcccgttaacccgttaggctcacggtgcactggggctaggcgctttcttgctgagcgcctaatcccgttagtcctgcagcatcacggtatcttccgaaatccaacgggtggtcctgaagattcctagtttcataggagtattttgtatcattacggtgtccctggcaagtgggacccatttgctgacaggtagttggacgacgtttcggtttatagtgttattgtcatacatcagctaatatttccgatttaggaaaataagaaaatttccatcacatgggactaggattattatattagggataaatagtaggagtatataactttttgtttcgaaaaaattcagccgcagatgtataaatatgttcaatatgatttgaacgacagtgagtgtatcatacgatagttgcttcttgcttccaacttagatttatcattaaatttcgtgtcctatctaaaataggagtactacaaatctaaaaccggtcacgttggattcgtgggtgatggtaaaggaaatgcaaaacccgttataagtgcccggttcaatgaacctggacataggtcaccttcgagcaaaacatcagattatgcccgtgtccaggttcactgtatctccttcgccacgttgtttctagaatcatggcccaccaaccacgcacaagcagacagaatagtttgctccactaccacacgataatttatgctttgaccctttaggagattccaaacaaattgtataccgcaacttttaacttgtcgcctagccgtgtaggcaacttctgatgcaggattaatcaaatggagcataaattcgcacaaattttaagtgtagttataaatttatgtgtttaatatttgatcggtcgccttattcatattttatgtgtatttgtgagtttcggtattcaacatttaatcatccgtcatatttgaaaagtttataaaaattttaaaaaataaatcacgcataaaatactataaatattttatcatctaataactataaaagtattgatgataaaaaataatcggttaaatattaaacatataaacccacaactgggagtgtggtggtatttgaaaatgaaaactgatcgagatctcgtcgcgtttttttttttttttgcagcggggcggaggacgtggcgctgatcgagtacgcgaagctgacggggcgtccgttccgcgtgttcagcctggacacggggcggctgaacccggagacgtaccagctgttcgacaaggtggagaagcactacgggatccggatcgagtacatgttcccggacgccggcgaggtgcaggcgctggtgcgcgccaagggcctcttctccttctacgaggacggccaccaggagtgctgccgcgcccgcaaggtgcgcccgctccgccgcgcgctccgcggcctcagggcctggatcaccggccagcgcaaggaccagtccccgggcacccgcgccgccatccccgtcgtccaggtcgacccctccttcgagggcctcgctggcggcgccggcagcctcgtcaagtggaaccccgtcgccaacgtcgacggcaaggacgtgtggaccttcctccgcgccatggatgtccccgtcaacgccctgcacgcccaggggtacgtctcgatcgggtgcgagccgtgcaccaggcccgtgcttcccggccagcacgagcgggaagggcggtggtggtgggaggacgccaaggccaaggagtgcggcctccacaaggggaacatcgacgaccagggtggggcggcggcggcggcggcgcacaaggccggcggcgccaacggcaacgggtcggccggcgcgccggacatcttcgagagcagcggcgtggtgagcctcacccgcgccggcgtcgagaacctgctccgcctggagagccgcgcggagccgtggctggtggtgctgtacgcgccgtggtgccccttctgccaggccatggaggcgtcctacctggagctcgccgagaggctgggcggcgcgggcggcggcgtgaaggtgggcaagttccgcgccgacggcgagcagaaggcgttcgcgcagcaggagctgcagctgcagagcttcccgaccatcctcctcttcccgagccgcaccgcgaggccgatcaagtacccgtcggagaagcgggacgtcgactcgctcctcgccttcgtcaacagcctccgatga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0509800, RefSeq:Os07g0509800