Os07g0515700

From RiceWiki
Revision as of 08:38, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0515700| Description = Ankyrin repeat containing protein| Version = NM_001066312.1 GI:115472356 GeneID:4343375| Length = 5907 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0515700

Description

Ankyrin repeat containing protein

Version

NM_001066312.1 GI:115472356 GeneID:4343375

Length

5907 bp

Definition

Oryza sativa Japonica Group Os07g0515700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20487447..20493353

Sequence Coding Region

20487964..20488035,20488684..20489181,20489635..20490000,20490373..20490464,20490563..20490609
,20490690..20490751,20491908..20492219

Expression

GEO Profiles:Os07g0515700

Genome Context

<gbrowseImage1> name=NC_008400:20487447..20493353 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:20487447..20493353 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgaaaggaatatttcgattgccaagaccatagcaaatgacataatcatcccagaccctgctcccgagtggatgtgttataccttcttggacaaatatgaccaattggagcccatctttataaaggatagtgcacgttgcttcctccgattattcaagaactggaagggctataccatgtcatggaatctcaccatcaccgcacaaaccttaacctgcatggtcagtttcaattccctgcgatgcgcgaaagttgtattggagggcagggcacctgagctccttggggtgcatgccaatcccaactgcgtaaccaaatatggatacttcccgctccatgaagctgctgaaaggttctctattgagatgatcaagctgctcttacgccatggtgcatcagccaacgtacgcacggttggcgacgatgtcatcgatggcctactcctgctccatatcgcgattgagaacacttgcctgcataagtatcttgaggacaatctttctcccggccaggatcatctggattatatctacaagcttttccatctgctgtgtttacctgaaatgaagatcttcctggatacaactagactacttgcaggaaaaacaaataatctccttgaagagctctggaattatattgagaatggaaaacttatccagaccgcaattctactactggctgctcaggagcagatccgagggggatgttcctccaagataaatggcagtagaaagaaaaatgggtatgacattatgtacaagcgtatactgaggctttcatttgccttgagatgggggaaagtttcaaatggaatgacacagaagcttatgaaggaaaagagggcactcattgattgcatggggctgcttgttgatgcaatttcccatgctggtgaacctctttctgcatacattcaggctcattcagaggcgccacatgtggaggtcttggaacatgtttcaactatcctcaaggagtatggattttgccctactgaagaagtcatggacaccataaacctccaaccttatgactgcaaaatgtcagaaacaaaatcatgtagcaaagggtttacagatgcaaacacggcagttgcggaaatggctaatctgcatgctgcagacaaaaaggctgggagaaaggaagtaggcagaggatgggatcccacatatacaaggagaaattttttcccatattggagatcaattttacgaacccggtgccctgtgaaggtgtatccaacctatgcacgagcagatgctaggtccgggcgtgatcttgaacagatccgtgcctttgagagcaactcatcaatggccaaaaatcgtatacttggttcagtgggaaggatcccatcactacttgcaagcaatcatcaatccaaaaggagctttagcactgctgctactggtgcattcaggctcttgaagctgttgaagtaa</cdnaseq>

Protein Sequence

<aaseq>MDERNISIAKTIANDIIIPDPAPEWMCYTFLDKYDQLEPIFIKD SARCFLRLFKNWKGYTMSWNLTITAQTLTCMVSFNSLRCAKVVLEGRAPELLGVHANP NCVTKYGYFPLHEAAERFSIEMIKLLLRHGASANVRTVGDDVIDGLLLLHIAIENTCL HKYLEDNLSPGQDHLDYIYKLFHLLCLPEMKIFLDTTRLLAGKTNNLLEELWNYIENG KLIQTAILLLAAQEQIRGGCSSKINGSRKKNGYDIMYKRILRLSFALRWGKVSNGMTQ KLMKEKRALIDCMGLLVDAISHAGEPLSAYIQAHSEAPHVEVLEHVSTILKEYGFCPT EEVMDTINLQPYDCKMSETKSCSKGFTDANTAVAEMANLHAADKKAGRKEVGRGWDPT YTRRNFFPYWRSILRTRCPVKVYPTYARADARSGRDLEQIRAFESNSSMAKNRILGSV GRIPSLLASNHQSKRSFSTAATGAFRLLKLLK</aaseq>

Gene Sequence

<dnaseqindica>518..589#1238..1735#2189..2554#2927..3018#3117..3163#3244..3305#4462..4773#acttcgcccgccacgccgcctccccctgcgccgatttccatccgtatccctcgaggttgggtgcccgtcgtcctgctgctttccgcctccggtgagcatccatatcccatcgcttgcctttgtagcagtaatctttgtttggagcgtgattcgagatcgaacttccttgttccagaaaaaaaaaagaacgaaaaatgtcaaaaagaagaaaaaagaacgaaagggtggagttgagatttaaggcacccgattatgctacgtggaaaaaggaggcagctgcatgcgacaaagctaatggcaatggtaaagatggatcgattacagtaagaagtgattatccatggcaccctccccatcgtttttaacttaccgagggattagatttggaaaagattgacgaggtatgataactacccagctgtggatatatcccaacccccccccccccccccccccaaaaaaaaaaatcctattttcttcccctagtgctgactcttgacattgtctctttcagtttatggatgaaaggaatatttcgattgccaagaccatagcaaatgacataatcatcccagaccctgctcccgaggtttgtgttaccttcatttacagaattcaattgatgaatcattccattatattaattattttgtttaatcctgtaatattatagggtacttaagtctactgaaccattgattatttaatgctgtcataatatgaaccttaaataagagcatctggattcacatgtctgaaccatgataggctgtagatccccttagagcaagtttaatagtatagccaactactaactccaaatcacctatagtcaacttaatagccaattcatacaatagtcacctataaacatatactatactattaatacatggtcccacctgttatacacacattatattttggagtccgtgttgcaactggctataaatctgtagcccgctgctattctctctcctcttttatttcctcgatatttgtttataactggtttatagtctgctattgtacctgctcttatattctgtcttcccttctccgtgcttcatgtttggtttcatctctagcccaccccaactttcttgctcacaaggttttgttattgttgttgtcatatatgcacctccataaacctcaaaacagtttattttgttgtgctttgttagttggataactgatgcctcaattttttttcgaatgtgatggatccatctagtggatgtgttataccttcttggacaaatatgaccaattggagcccatctttataaaggatagtgcacgttgcttcctccgattattcaagaactggaagggctataccatgtcatggaatctcaccatcaccgcacaaaccttaacctgcatggtcagtttcaattccctgcgatgcgcgaaagttgtattggagggcagggcacctgagctccttggggtgcatgccaatcccaactgcgtaaccaaatatggatacttcccgctccatgaagctgctgaaaggttctctattgagatgatcaagctgctcttacgccatggtgcatcagccaacgtacgcacggttggcgacgatgtcatcgatggcctactcctgctccatatcgcgattgagaacacttgcctgcataagtatcttgaggacaatctttctcccggccaggatcatctggattatatctacaagcttttccatctgctgtgtttacctgaaatggtttgtttctcttccctccatatatatgcaaagtactggagtacttttaatttgcagcatgacataaagagtaattaactgttgtcatgccatagatcccagacagctgttattatgaattagttatattaaggactaaacatccttttgtctccacttgtcagagggagtaaagtttccctttgttaatcttttgtcttactttgtgttagtgcatcttcatatagttaaagacaaggagagtcttcaataaaatatactaaaatgttgctagtaagtaattttattttctttgcctcaatccataattactttgataggaagattgtccctaatccataattactttgataggaagaaatgaaaccatatatagaaagttaatcggcactacttgcttgcacataaaaatgctaaatggcacttagatttttgttccttttgttttaacagaagatcttcctggatacaactagactacttgcaggaaaaacaaataatctccttgaagagctctggaattatattgagaatggaaaacttatccagaccgcaattctactactggctgctcaggagcagatccgagggggatgttcctccaagataaatggcagtagaaagaaaaatgggtatgacattatgtacaagcgtatactgaggctttcatttgccttgagatgggggaaagtttcaaatggaatgacacagaagcttatgaaggaaaagagggcactcattgattgcatggggctgcttgttgatgcaatttcccatgctggtgaacctctttctgcatacattcaggctcattcagaggtacgcgtttttggtatgttgcagctgtggtgcctctaatgcatttataaattaaatatacatagataatatttggaatttgaataactgaaggactgtaaagtttagttaaacatacagaattgcgatgcaggtcttgattggtacttttgaagcgtctggataacctctgattacaataaccaagatgaatcaatctaaatgaattcgaatatgtatgttatgtcgtttataaaaccaagtagaaaatttaatgtgcttgtatgtttgcaactgtttttgcacactattctattgcattccaattcatataatcgcaaattttctccttctgattatttgtgatctagcttatacaacatattgtcgcaggcgccacatgtggaggtcttggaacatgtttcaactatcctcaaggagtatggattttgccctactgaagaagtcatggacaccataaacctgtactactttttgttttgcttcacacaacaattttctatgtgaatacatgttaattttgctgattattttgctttgttcttccactttttccttgaagccaaccttatgactgcaaaatgtcagaaacaaaatcatgtagcaaaggtgtgttgggctcaagtgattctttttacatttaacaaaaatgagccctaagcctcctttttttttttcatggagaacagggtttacagatgcaaacacggcagttgcggaaatggctaatctgcatgctgcagacaaaaaggtaaagataatcaaatattactgtatcggagcatctctacctttgccttcttgtgagatgtagtacgtaaggtgtcattcacacaaatagtagtgtagtattgcagtgtgcagcagccaggtaagtcagttgcatgattagtttggtatcaagtttgatttggttgctacttgctagttgtcgattgttatatgggctgaagacctatctctagtccataccccccccccccccccccccccccccgcggtgccctgtggaagttcttggtcttggtggtaatggtctatacacatgcttcaatttctgttcttttacatgtctaaactatcctttgtatggagcaatgcagactcttttatggcagggtattgtcctagaagttagtatcttgtgaacaaatctgaaagtaaataagtaaagtagagataactaataacaaattggctgcagaaagattgctatagaaatttctgtcctttccttgtttgatttttttagaaaaaaaaattacaccaacttttttttataaaaattatgtaacaaattgacaaatcccgttgctttgaattgcttccaaatacagttggccttgcaatgccacacattccaattatgattcatctctgccacgctaatgtgatcgagactactgtgtttctcatcaggttctttaccaaagataaggggtaaatgcaataaaaaataataaaggaaataatacaaataatgaaattaaactagcgcctggctaaaaccccgttgggcataattagctcaataacatagctgaattgtttcaattcccaagtaatatcaacactgagacttgacaaagggggcttgcatcttctctctgaggaagattctgatgaaggaagatgcagtgtaatattattaagttgttagaggcaacaacaaaagcaaatatttcgcttgctatgtttgtagcatgccttctgctgcttcaacagcttatcatgttgcttaagcagtactgcactgtagtaaaaccattcatatccaacaaaacaccaatactttgtgttaattaacatagaacctctcaagtgagagattgtggctgaccaatatgaatatattatgtctgtttgtttttccaatgctgtacttttattgaaatactatgtaacaggctgggagaaaggaagtaggcagaggatgggatcccacatatacaaggagaaattttttcccatattggagatcaattttacgaacccggtgccctgtgaaggtgtatccaacctatgcacgagcagatgctaggtccgggcgtgatcttgaacagatccgtgcctttgagagcaactcatcaatggccaaaaatcgtatacttggttcagtgggaaggatcccatcactacttgcaagcaatcatcaatccaaaaggagctttagcactgctgctactggtgcattcaggctcttgaagctgttgaagtaaagcacgagtacaaaaggtatgcccatgagtttttttttttttttttgccaagtttcgtttgatgcacctttaacttggtactatatccatcttaaaatataaggcgtattttgttctgttatgataaggttttgtttcgcaattgcttccctaatatattatctattcctatatgaagacgaatctagtaacaccaattttgcttcataaaagttatattataatagagtaattgttgatcaaagtctcgtcctaatgaaaacaatatatgttatatattttgaaatagagggagtaaggttatttgttaagtactcctaacaccccaaaatatcagtttttagccatcaggatttgtcccaaaatataacaacttcttcgccaacatttttttctcaactaatcacaaccctccaccattcacttttcccacctacctctactactcatccaatcataactctccaccattcacttctacctactttcgtaggctgtgtttagttcctgaaaaaagttggaagtttggggaaagttggaagtttggaaaaaaagttggaagtttatgtgtgtaagaaagttttagatgtgatgtgatgtgatggaaagttgaaagtttggggtagttgggggtgaactaaacacggccttaataaccgtgtccaactctaaagcttcttatattttgggatggagggagtagttcattaatgattgacgagttgcttatagtgttaggtattctattattttgtcttattttccgatgtttaagtttgtatggcgcggtgttctaacatccatatttatgtaatacacaaaataacgaatatttacatcaaatcataatgtttttgttttgtttgtgcaggttctatagttgagagaccaaatattgacttttctctgaaaattaattcacctgtgacagatctagcatgggggctccaatacccttgcccgctggatcttgagggaaggaggaagaagagggatttgagcaagaaggcaatgaccctccttcaatctcaagctgcatcagcccctgtaattcacaataaatatgattcattttatatctgtacgtagcaaattaatttataaaaagggtcaaaaaggaaatatttttttctt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0515700, RefSeq:Os07g0515700