Os07g0526400

From RiceWiki
Revision as of 08:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0526400| Description = Type III polyketide synthase family protein| Version = NM_001066365.2 GI:297607347 GeneID:4343432| Length = 1711 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0526400

Description

Type III polyketide synthase family protein

Version

NM_001066365.2 GI:297607347 GeneID:4343432

Length

1711 bp

Definition

Oryza sativa Japonica Group Os07g0526400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21164850..21166560

Sequence Coding Region

21165182..21166179,21166265..21166466

Expression

GEO Profiles:Os07g0526400

Genome Context

<gbrowseImage1> name=NC_008400:21164850..21166560 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21164850..21166560 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagcactccggctgctgttccggtcaccgtcgacgagctccggcgtgcgcagcgcgcagacggcaccgccgccgtgctggccatcggcacggcgaacccggcgaactgcgtgacccaggccgactacgccgacttgtactgccgtgtcaccaacagcgagcacgttgctgggttcaaagacaaattagacgcactatgcgtatcggcgtcgggcagtgagaagcgtttcttccaccacaccgaggaaatgatcaacgcgcaccctgaattcctcgaccgcgcgacgccgtcgctggacgcgcgcctggagatcgccgccgcggccgtcccagagctcgccgcgacggccgcggcgagggccatcgtccagtggggccgccccgccaccgacatcacccacctcgtcgtgaccaccaacgcgggcgcccacgccccgggcgccgacgtccgcctcgccgcgctcctcggcctccgccccaccgtgcgccgcaccatgatccacctcaacggctgctccgcgggcgccgccgcgctgcgcctcgccaaggacctcgccgagaacagccgcggcgcgcgcgtcctcgtcgcctgcgtcgagctcaccgtcctcaccttccgcgggccttacagcccccacaccgtcacctgccaggcgctgttcggcgacggcgccggcgcggtcatcgtcggcgccgacgccgcgcgccccgtcgagcacccgcttttcgagatggtctccgcctcgcagacgctcataccggggaccgagcacgtcatcaccatgcagctcacggagcacggcctcgacggcgacatcgacaccaaagagctcgtccctctcgccgcgaacaacgtcaagcagtgcctctccgacgcgctcacgccgctcggcctcgacggcggcgagtggaacgacctcttctgggcggtgcacccgggaagcccgttgatcttggaccacatcgagagcgctctccagctaaagcaggggaaactggcagcgagccgaaaggtgctaagggagaacggcaacatgctgggcagcacgctgatcttcgtgctggaggagcagcgaaggcggatggaggaggaaggagacggagccgagtggggggtgatgctgggatttggacccggtttcaccattgagaccatggtgctccacgcacctgatgacagcaggaagaagaattag</cdnaseq>

Protein Sequence

<aaseq>MGSTPAAVPVTVDELRRAQRADGTAAVLAIGTANPANCVTQADY ADLYCRVTNSEHVAGFKDKLDALCVSASGSEKRFFHHTEEMINAHPEFLDRATPSLDA RLEIAAAAVPELAATAAARAIVQWGRPATDITHLVVTTNAGAHAPGADVRLAALLGLR PTVRRTMIHLNGCSAGAAALRLAKDLAENSRGARVLVACVELTVLTFRGPYSPHTVTC QALFGDGAGAVIVGADAARPVEHPLFEMVSASQTLIPGTEHVITMQLTEHGLDGDIDT KELVPLAANNVKQCLSDALTPLGLDGGEWNDLFWAVHPGSPLILDHIESALQLKQGKL AASRKVLRENGNMLGSTLIFVLEEQRRRMEEEGDGAEWGVMLGFGPGFTIETMVLHAP DDSRKKN</aaseq>

Gene Sequence

<dnaseqindica>382..1379#95..296#atcacttgcatccttgtaacatccagttcttcgaatcttcgagcttctagagccactgctatagctagctagctaggacaaagggacaaacaccatggggagcactccggctgctgttccggtcaccgtcgacgagctccggcgtgcgcagcgcgcagacggcaccgccgccgtgctggccatcggcacggcgaacccggcgaactgcgtgacccaggccgactacgccgacttgtactgccgtgtcaccaacagcgagcacgttgctgggttcaaagacaaattagacgcactatgtaattaagcttcgcaaattaagtcatttattcccatttttcaactatcatttgactcatctttgtttgcttggtgatttttcaggcgtatcggcgtcgggcagtgagaagcgtttcttccaccacaccgaggaaatgatcaacgcgcaccctgaattcctcgaccgcgcgacgccgtcgctggacgcgcgcctggagatcgccgccgcggccgtcccagagctcgccgcgacggccgcggcgagggccatcgtccagtggggccgccccgccaccgacatcacccacctcgtcgtgaccaccaacgcgggcgcccacgccccgggcgccgacgtccgcctcgccgcgctcctcggcctccgccccaccgtgcgccgcaccatgatccacctcaacggctgctccgcgggcgccgccgcgctgcgcctcgccaaggacctcgccgagaacagccgcggcgcgcgcgtcctcgtcgcctgcgtcgagctcaccgtcctcaccttccgcgggccttacagcccccacaccgtcacctgccaggcgctgttcggcgacggcgccggcgcggtcatcgtcggcgccgacgccgcgcgccccgtcgagcacccgcttttcgagatggtctccgcctcgcagacgctcataccggggaccgagcacgtcatcaccatgcagctcacggagcacggcctcgacggcgacatcgacaccaaagagctcgtccctctcgccgcgaacaacgtcaagcagtgcctctccgacgcgctcacgccgctcggcctcgacggcggcgagtggaacgacctcttctgggcggtgcacccgggaagcccgttgatcttggaccacatcgagagcgctctccagctaaagcaggggaaactggcagcgagccgaaaggtgctaagggagaacggcaacatgctgggcagcacgctgatcttcgtgctggaggagcagcgaaggcggatggaggaggaaggagacggagccgagtggggggtgatgctgggatttggacccggtttcaccattgagaccatggtgctccacgcacctgatgacagcaggaagaagaattagttcagagcaaaggtaagtgaacgcaaacactgatgttctcggccatgtctgctaatgaggttctaaatggattagtacgcaaatgaaggcatcatagtggtacttgttccagaggtttcatgtattcgtgctgttatattgctaaaccacgtgttatgtttttatctattgtcgagcaatgtttcatgtattcagagaaacttgagtggatggtaccatactaccattcacgatgtaaaatgtactgttgggcatttgtgtgacgtgcgctatatatgttctgctacttcacatttgaagggttaataaaagtaaaacagacagtcaattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0526400, RefSeq:Os07g0526400