Os07g0527600

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Revision as of 08:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0527600| Description = Similar to 2-Hydroxyisoflavanone dehydratase| Version = NM_001066369.1 GI:115472470 GeneID:4343436| Length = 3453 bp...")
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Gene Name

Os07g0527600

Description

Similar to 2-Hydroxyisoflavanone dehydratase

Version

NM_001066369.1 GI:115472470 GeneID:4343436

Length

3453 bp

Definition

Oryza sativa Japonica Group Os07g0527600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21256910..21260362

Sequence Coding Region

21256910..21257609,21257636..21257720,21259048..21260362

Expression

GEO Profiles:Os07g0527600

Genome Context

<gbrowseImage1> name=NC_008400:21256910..21260362 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21256910..21260362 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcatgcacaaaagaatgccgtcgtcgtcgccgacgacgtcgccatcgatctccacccgttcatacgcaagtacaacgacggccgcgtcgagcgtatcctgcgcagcagcttcgtgccggcgtcggaggaccccgccgccagccgcggcggggtggcggcgagggacgtcatcatcgacgaacgcaacggcgtgtccgcacgcctgtttctcccgtccggcgccgacggcgggaggcggcttcttcccgtcgtcgtgtacttccacggcggctgcttctgcaccgagagcgccttcggccggacgtaccaccgttacgccgcctccctcgcctcgcgcgccggggcgctcgtcgtgtccgtcgagtaccgcctcgcgcccgagcaccccgtgcccgcggcgcacgacgacgcgtgggcggcgctccggtgggcggcgtccctctcggacccctggctcgccgaccacgcggaccccggccgcacgttcgtcgccggcgacagcgccggcggccacatcgcgtaccgcacggcggtgcgcgccgccagccgcgaaggcggcgacatcggcatcgaggggctcataatcatccacccttacttctggggagctcgcatgctgccttccgaggcggcctgggacggcgagtcggtgatcaagccgcatcaggtcggcgagctctggccgttcgtgacgtccggcaaggcgggcaacgacgacccatggatcgaccctcccgtcgaggaggtcgcgtcgctaacctgccgtcgcgcgctggtggccgtggcggagaaggacttcctacgcgaccgcggccgcctcctcgccgcccgcatgcgcggctgcgcgtgggccggtggcggcgacggacgcaacgtgacgcttgtggagtcggagggcgaggaccacgggttccacctctacagccctctccgcgcgaccagcaggaggctcatggagagcatcgtgcagttcatcaaccagcctagccatagccccgcgccgctgcggtggccggccaccatcctttccgagctgcatgacactaccgactcgccacagattcttctacccatgcccactagggagtacaaagcagtatttattgacaggttggaaaagagaactaaaacaggtgcaagctcagcaaatagtactgctgctaatgcatcgttaacaatcggccgggggaaactagcaacaaagaaaagctacgggttgttcttcggccggaccagagctcatatttacggagggttagcttctgcagggagcctgcagtgtcctcgtcccttctgtggagcaccgttgtcagatactcccatcgtttctttcaacacgtcgggatgtgcctctaaaacattttactctagtgtccgcgaggctattccacccgtccggaggcttcccatcgtggtctacttccacggcggctcgttctgcacggagagcgccttctgccgcacgtaccaccgctacgccacctccctcgcctcgcgcaccggggcgctcgtcgtgtccgtcgagtaccgcctcgcgccggagcatcccataccggcggcgtacgacgaagcgtgggccgcgctccagtgtcggcgactcggcgttccccccgtacagtacaaggtggacacgctctggccattcgtgacgcttgtggagtcggagggcgaggaccacggcttccacctctacagccctctccgcggtccgcgcagacaagcaggacgctcatggagagcatcgtgctgccggagttgcacgagcacttctactctccgttgcacgcaagcaatggcgatcagaagatgtcaaggggcgcaactgatttgtcttcgtcccggccgcattctgttaagcgtgccatctaggccgtaccttgctgcgtttcgtgatgagccggacaaggtgatagctcgaagtggcaagagatgcatggagattaacaatgcattaatagttggacaggagaaagcatcaaggagaagcttcgggttaatttcggcaagggccaagcctgataactggagggcctccaagaacccactgctgtcagcatcagtacgtctcaggattaccatggccaagaatttcttatag</cdnaseq>

Protein Sequence

<aaseq>MHAQKNAVVVADDVAIDLHPFIRKYNDGRVERILRSSFVPASED PAASRGGVAARDVIIDERNGVSARLFLPSGADGGRRLLPVVVYFHGGCFCTESAFGRT YHRYAASLASRAGALVVSVEYRLAPEHPVPAAHDDAWAALRWAASLSDPWLADHADPG RTFVAGDSAGGHIAYRTAVRAASREGGDIGIEGLIIIHPYFWGARMLPSEAAWDGESV IKPHQVGELWPFVTSGKAGNDDPWIDPPVEEVASLTCRRALVAVAEKDFLRDRGRLLA ARMRGCAWAGGGDGRNVTLVESEGEDHGFHLYSPLRATSRRLMESIVQFINQPSHSPA PLRWPATILSELHDTTDSPQILLPMPTREYKAVFIDRLEKRTKTGASSANSTAANASL TIGRGKLATKKSYGLFFGRTRAHIYGGLASAGSLQCPRPFCGAPLSDTPIVSFNTSGC ASKTFYSSVREAIPPVRRLPIVVYFHGGSFCTESAFCRTYHRYATSLASRTGALVVSV EYRLAPEHPIPAAYDEAWAALQCRRLGVPPVQYKVDTLWPFVTLVESEGEDHGFHLYS PLRGPRRQAGRSWRASCCRSCTSTSTLRCTQAMAIRRCQGAQLICLRPGRILLSVPSR PYLAAFRDEPDKVIARSGKRCMEINNALIVGQEKASRRSFGLISARAKPDNWRASKNP LLSASVRLRITMAKNFL</aaseq>

Gene Sequence

<dnaseqindica>2754..3453#2643..2727#1..1315#atgcatgcacaaaagaatgccgtcgtcgtcgccgacgacgtcgccatcgatctccacccgttcatacgcaagtacaacgacggccgcgtcgagcgtatcctgcgcagcagcttcgtgccggcgtcggaggaccccgccgccagccgcggcggggtggcggcgagggacgtcatcatcgacgaacgcaacggcgtgtccgcacgcctgtttctcccgtccggcgccgacggcgggaggcggcttcttcccgtcgtcgtgtacttccacggcggctgcttctgcaccgagagcgccttcggccggacgtaccaccgttacgccgcctccctcgcctcgcgcgccggggcgctcgtcgtgtccgtcgagtaccgcctcgcgcccgagcaccccgtgcccgcggcgcacgacgacgcgtgggcggcgctccggtgggcggcgtccctctcggacccctggctcgccgaccacgcggaccccggccgcacgttcgtcgccggcgacagcgccggcggccacatcgcgtaccgcacggcggtgcgcgccgccagccgcgaaggcggcgacatcggcatcgaggggctcataatcatccacccttacttctggggagctcgcatgctgccttccgaggcggcctgggacggcgagtcggtgatcaagccgcatcaggtcggcgagctctggccgttcgtgacgtccggcaaggcgggcaacgacgacccatggatcgaccctcccgtcgaggaggtcgcgtcgctaacctgccgtcgcgcgctggtggccgtggcggagaaggacttcctacgcgaccgcggccgcctcctcgccgcccgcatgcgcggctgcgcgtgggccggtggcggcgacggacgcaacgtgacgcttgtggagtcggagggcgaggaccacgggttccacctctacagccctctccgcgcgaccagcaggaggctcatggagagcatcgtgcagttcatcaaccagcctagccatagccccgcgccgctgcggtggccggccaccatcctttccgagctgcatgacactaccgactcgccacagattcttctacccatgcccactagggagtacaaagcagtatttattgacaggttggaaaagagaactaaaacaggtgcaagctcagcaaatagtactgctgctaatgcatcgttaacaatcggccgggggaaactagcaacaaagaaaagctacgggttgttcttcggccggaccagagctcatatttacggagggttagcttctgcagggagcctgcagtgtcctcgtcccttctgtggagcaccgttgtcaggttagctaatctccgtggccaatgacaaagagttctgatgggatacggtgtgttttactactgggcgatgacaagatgttgttttataattattatgtggaaaaacaactgttctggtaaaatctccctataacgtaagaaaagctggtattatgtcaaaaaatatttaaatcaatcaaggagctaagtacaagttatctgcaaccagttgtaagttgtaatgttcattcttattaaaattatttatgatccatcggtggtatgtacttttccggttttatattatattatataaatagctagaaaccaagtgacattacgtatctctaataatatgaaggtctgtcattaaagataactatgaattatggtcttgtacttacaagtactaatatttcaaaaatgaaattgctagaaaacttgcgacagttttcttgaattttcagcccttagatccgctccgtggttcgtgcaggcaagaaggaagaaaacagcaaaaaaaaaaggagaaaactgtcgaattttcagcactttgatccgctccgttattcgtccgtgcaagaaggaagtaaacagcaaaaaaaaaagtgttgtagacaggaatcaatcctaggccctccccttaaataagacagcattccaaccactaagccagctcaagtatatattgaatgaacaattacattttacttacgctataattagctacacaattagtcccctattttcctctaattttcggataatcttgttatatttctactctcttacgggcttgctagcaatgacatcagtgttggatgcaaaggcttaaaaaattttgaatgtttggtacctcgtttctgtcgaacgtcctataggtattcacgtgttttaatctacttacatagcacttacactttagttacatagtagttacttaacacttacaccgtaattaatacagagtagttacatagtacttatacctcaattatgtactagttacatgatagttatagtgtagctacattgtataaaattaggatttacaatttttttcaagagcatgcgtattacttttgaattatttttcccttatacatgttgaccaatttcatgccgttcaatcaatctgggtgctaagattagtggtttatacttatgtggacccgtttcaactgttgatgacagatcctatgaaagttttgagcctaaaaactatcgataactcactagctagttccaaaaaagaatacacgatagatcagcctttcgtacttatctttttttttttgactaagcttcgtacttatctttaatttttgtttttttttgaattacacagatactcccatcgtttctttcaacacgtcgggatgtgcctctaaaacattttactctagtgtccgcgaggctattccacccgtccggtacgtgccgccgccaccggccggaggaggcttcccatcgtggtctacttccacggcggctcgttctgcacggagagcgccttctgccgcacgtaccaccgctacgccacctccctcgcctcgcgcaccggggcgctcgtcgtgtccgtcgagtaccgcctcgcgccggagcatcccataccggcggcgtacgacgaagcgtgggccgcgctccagtgtcggcgactcggcgttccccccgtacagtacaaggtggacacgctctggccattcgtgacgcttgtggagtcggagggcgaggaccacggcttccacctctacagccctctccgcggtccgcgcagacaagcaggacgctcatggagagcatcgtgctgccggagttgcacgagcacttctactctccgttgcacgcaagcaatggcgatcagaagatgtcaaggggcgcaactgatttgtcttcgtcccggccgcattctgttaagcgtgccatctaggccgtaccttgctgcgtttcgtgatgagccggacaaggtgatagctcgaagtggcaagagatgcatggagattaacaatgcattaatagttggacaggagaaagcatcaaggagaagcttcgggttaatttcggcaagggccaagcctgataactggagggcctccaagaacccactgctgtcagcatcagtacgtctcaggattaccatggccaagaatttcttatag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0527600, RefSeq:Os07g0527600