Os07g0532800

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Revision as of 08:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0532800| Description = Peptidase A1, pepsin family protein| Version = NM_001066391.2 GI:297607360 GeneID:4343460| Length = 1538 bp| Defini...")
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Gene Name

Os07g0532800

Description

Peptidase A1, pepsin family protein

Version

NM_001066391.2 GI:297607360 GeneID:4343460

Length

1538 bp

Definition

Oryza sativa Japonica Group Os07g0532800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21544775..21546312

Sequence Coding Region

21544808..21546118

Expression

GEO Profiles:Os07g0532800

Genome Context

<gbrowseImage1> name=NC_008400:21544775..21546312 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:21544775..21546312 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcatccagcactgctgccatactagccctcgtcatcatcctcctcccgccgataactctcgccggcgatcttcatggcttccgcgccactcttactcgcatccacgagctctcccccggcaaatactcggaagcggtacgccgcgacagccaccgcatcgcttttctctccgacgccaccgcagccggcaaggccaccaccaccaactcgtcggtcagtttccaggcactgcttgagaacggcgtgggagggtacaacatgaacatctccgtcggcacgccgctactcaccttctcggtcgtggccgacaccggcagtgacctcatctggacgcagtgcgcgccgtgcaccaaatgcttccagcagcctgcgccgccattccagccggcgagctcctccaccttctccaagctcccgtgcaccagctccttctgccagttcctacccaactccatccgcacgtgcaacgccaccggctgcgtctacaactacaagtacggcagcggctacaccgcgggctacctcgccaccgagacgctcaaagtcggggacgcctctttccccagcgtcgcgttcgggtgcagcacggagaacggcgtgggcaactcgacgtcgggcatcgcgggtcttggccgcggcgcgctgtccctcataccgcagctcggcgtcggccggttctcgtactgcctccgctccggctctgccgccggcgccagcccgatactgttcggctccctggccaatcttacggacggaaatgtccagtcgacgccgttcgtcaacaaccccgcggtacacccctcgtactactacgtcaacctcaccggcatcaccgtcggtgagacggacctcccggtgacgaccagcacgttcggcttcacgcagaacggcctcggcggcggcacgatcgtggactccggcaccacgctcacgtacctcgccaaagacggctacgagatggtgaagcaggccttcctgtcccagacggctgacgtgaccacggtgaacggcacgcgcggcttggacctgtgcttcaagagtaccggcggcggcggcggcggcatagccgtgccgagtctggtgctgcgcttcgatggcggagctgagtacgccgtgccaacttacttcgccggagttgagacggactcgcagggcagtgtgaccgtagcgtgcttgatgatgctgccggcgaagggtgaccagccgatgtctgtcataggcaacgtgatgcagatggacatgcacctgctctacgatctcgacggcgggattttctccttcgctccggcggattgcgccaaagtgtga</cdnaseq>

Protein Sequence

<aaseq>MSSSTAAILALVIILLPPITLAGDLHGFRATLTRIHELSPGKYS EAVRRDSHRIAFLSDATAAGKATTTNSSVSFQALLENGVGGYNMNISVGTPLLTFSVV ADTGSDLIWTQCAPCTKCFQQPAPPFQPASSSTFSKLPCTSSFCQFLPNSIRTCNATG CVYNYKYGSGYTAGYLATETLKVGDASFPSVAFGCSTENGVGNSTSGIAGLGRGALSL IPQLGVGRFSYCLRSGSAAGASPILFGSLANLTDGNVQSTPFVNNPAVHPSYYYVNLT GITVGETDLPVTTSTFGFTQNGLGGGTIVDSGTTLTYLAKDGYEMVKQAFLSQTADVT TVNGTRGLDLCFKSTGGGGGGIAVPSLVLRFDGGAEYAVPTYFAGVETDSQGSVTVAC LMMLPAKGDQPMSVIGNVMQMDMHLLYDLDGGIFSFAPADCAKV</aaseq>

Gene Sequence

<dnaseqindica>34..1344#acgaaaaagacgacaaggagggacacaggaaacatgtcatccagcactgctgccatactagccctcgtcatcatcctcctcccgccgataactctcgccggcgatcttcatggcttccgcgccactcttactcgcatccacgagctctcccccggcaaatactcggaagcggtacgccgcgacagccaccgcatcgcttttctctccgacgccaccgcagccggcaaggccaccaccaccaactcgtcggtcagtttccaggcactgcttgagaacggcgtgggagggtacaacatgaacatctccgtcggcacgccgctactcaccttctcggtcgtggccgacaccggcagtgacctcatctggacgcagtgcgcgccgtgcaccaaatgcttccagcagcctgcgccgccattccagccggcgagctcctccaccttctccaagctcccgtgcaccagctccttctgccagttcctacccaactccatccgcacgtgcaacgccaccggctgcgtctacaactacaagtacggcagcggctacaccgcgggctacctcgccaccgagacgctcaaagtcggggacgcctctttccccagcgtcgcgttcgggtgcagcacggagaacggcgtgggcaactcgacgtcgggcatcgcgggtcttggccgcggcgcgctgtccctcataccgcagctcggcgtcggccggttctcgtactgcctccgctccggctctgccgccggcgccagcccgatactgttcggctccctggccaatcttacggacggaaatgtccagtcgacgccgttcgtcaacaaccccgcggtacacccctcgtactactacgtcaacctcaccggcatcaccgtcggtgagacggacctcccggtgacgaccagcacgttcggcttcacgcagaacggcctcggcggcggcacgatcgtggactccggcaccacgctcacgtacctcgccaaagacggctacgagatggtgaagcaggccttcctgtcccagacggctgacgtgaccacggtgaacggcacgcgcggcttggacctgtgcttcaagagtaccggcggcggcggcggcggcatagccgtgccgagtctggtgctgcgcttcgatggcggagctgagtacgccgtgccaacttacttcgccggagttgagacggactcgcagggcagtgtgaccgtagcgtgcttgatgatgctgccggcgaagggtgaccagccgatgtctgtcataggcaacgtgatgcagatggacatgcacctgctctacgatctcgacggcgggattttctccttcgctccggcggattgcgccaaagtgtgatttgtaccgtccgtttggttactgtattaaccggcgagagtaataagtctacgagtgcctacctaccatatcagccatttgatgttgctgttggtcaagtctttcttcttgttttgcacatatcgtcctgagtcagtccgtctgctggttccttaatatgtggtgatgaatgaattctatgttccgtgcctttg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0532800, RefSeq:Os07g0532800