Os07g0548900

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Revision as of 08:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0548900| Description = Conserved hypothetical protein| Version = NM_001066465.2 GI:297607420 GeneID:4343535| Length = 5288 bp| Definition ...")
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Gene Name

Os07g0548900

Description

Conserved hypothetical protein

Version

NM_001066465.2 GI:297607420 GeneID:4343535

Length

5288 bp

Definition

Oryza sativa Japonica Group Os07g0548900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22448733..22454020

Sequence Coding Region

22449020..22449095,22449456..22449533,22449881..22449958,22451783..22451950,22452448..22452634
,22453756..22453918

Expression

GEO Profiles:Os07g0548900

Genome Context

<gbrowseImage1> name=NC_008400:22448733..22454020 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22448733..22454020 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaccgacgccgccgcgatggccgtcgtgaaggcggcgcgcccggccttccgcggcgcccacgacggggtcgccttcgccgccaacgccgcgttcctcgccgccggctactccctctgcgccgtcggccccgccgcgctcaccgaccccccgccctcaggtgaagaggaggtggggattgatggttggaacagcatggataattgttatgcatttttgtacatcaaggaggagaggggcaagaagaaacgggtattggtaaaatgtctggtgatcggtgatgtccttgccattgatgtcctggatcttgagtcacagaataaaggcccttataatatccagatcaatgtgaaggatttcttctccgaggagcagccaaagaactatgggaacatgtacaaaaactttgcaggcttaattgagaccatgaactcaaatgcattgagcaaattggatgagaaggatgctggtgctgccaagaaccctgaggttgagactagctcatcaatacacagcttggtttatcctccaatagctccacttggtcatgatgatgccttccctggccctggcgcaggcttctatcctcataggagtgttccaccaggtggtcgttatgatccaattggtccaccagatgttccaggatttgaaccttctcgctttgtgaggcgtccgaggcctccagctgggactactcacccagaccttgagttcttccagccggggccgcacgggcccttctga</cdnaseq>

Protein Sequence

<aaseq>MVTDAAAMAVVKAARPAFRGAHDGVAFAANAAFLAAGYSLCAVG PAALTDPPPSGEEEVGIDGWNSMDNCYAFLYIKEERGKKKRVLVKCLVIGDVLAIDVL DLESQNKGPYNIQINVKDFFSEEQPKNYGNMYKNFAGLIETMNSNALSKLDEKDAGAA KNPEVETSSSIHSLVYPPIAPLGHDDAFPGPGAGFYPHRSVPPGGRYDPIGPPDVPGF EPSRFVRRPRPPAGTTHPDLEFFQPGPHGPF</aaseq>

Gene Sequence

<dnaseqindica>4926..5001#4488..4565#4063..4140#2071..2238#1387..1573#103..265#ggagctgtgactacaaagatttctctcgaaaccccacgaacgcgaccaccgcctcccctcccccttccctcgaccgccgtgacgccgcccgcgaatcgcgcgatggtgaccgacgccgccgcgatggccgtcgtgaaggcggcgcgcccggccttccgcggcgcccacgacggggtcgccttcgccgccaacgccgcgttcctcgccgccggctactccctctgcgccgtcggccccgccgcgctcaccgaccccccgccctcaggtgcgcgcgcgctccctcgctcccgccgccccttccgccctagccctagggtttcctactttccttcctcgtgtgtcgattaggttttttttgcacctcccaagtttagagttcgcgcgtttgggtttatggaaattggaatacccaggttggtagatgtcgatgtgctacgagtggtactccgctgtgtagaattagggcgtcgtggtgtaaggcctgattgaattggtagcaattctaatgtgcgtgtgattttcttcaggataacttgtcacggcgagtttaatgggttccatggattggatttctatagattctagtgggttttgcatcagttccttgactacaacttagcacttacctggatctgcttatagtacagaaattttggactgggaaataggaatctcactgagtatctctgtttgctaatgggtctccaagtgttttgtgcatttctatgtataggatggctgtggtatatacacatatttagatgttctgaaaacatttctctcccttactatttctcttgttccaccatccccacttatccgataattagtggataatgtggatagtatgcgtaaaatgcatagtttacatacacgtttaccatagttactctcttctgtatgttcgtcagaaaatatagcagctagtttaatcgaagcattaactgagataaaattaatacatatatgcaggtgattgaaatttctttaccaatactgcaatctcaatgtgcgtttatgtccaccataatgtatttggttcctttgtttaaattccaaattcttgcactgaagattaggggtcagactgaagattttagttctgtgctacagcttgcagagtaggggttagataaccaaggtgtgaaatatttggaagcaaatgctttatcataaatatggttttgtgtatttgactcataattcttaaattccgaataattttaagtcttagtcagtcttcactagttaaatcttgttatgtggtcagagagatgtgactttaagcaaacatcttaccacctgcttgcatttcatggttatgctcagtaattctcctgagttcttagtcttatagtaagttttgtattgtacctataactttaggtgaagaggaggtggggattgatggttggaacagcatggataattgttatgcatttttgtacatcaaggaggagaggggcaagaagaaacgggtattggtaaaatgtctggtgatcggtgatgtccttgccattgatgtcctggatcttgagtcacagaataaaggcccttataatatccagatcaagtatgtttcaaagctgcaccttcttgctttgttttgtaccatacttatgtttctggtgcgatttaagtatgtaaagaagcagaagcagtaatctatttcctccgtcccaaaatataagaatttctagcatttgaaatttgtccccaaatataaggacttctagatattattttgcccagcaaccacccctcatttagttttcatcacatcttatccccaacgagccctcatatgataaggggcatcataatcttttcccttcatccttagtctctccaaaaaatcctgaagtccttatattttgggacggatggagtgcaaataagtgtagaaccattatatggttattagcaacgaacactgtctcgtaatctcgtattatgcagatgcattattttgttcactctgcgatttgccagttccattaaactgttcctttctcatcttgaaggttctggcttatttttgggtatcttacttttgtttcttgtgtgcagtgtgaaggatttcttctccgaggagcagccaaagaactatgggaacatgtacaaaaactttgcaggcttaattgagaccatgaactcaaatgcattgagcaaattggatgagaaggatgctggtgctgccaagaaccctgaggttgagactagctcatcaatacacaggtaattgataattttctatgcttcctttttggcaatactccctcttctccaaaacacatgtgtgtgcacgcgcgtgcatattttgttcacgtacattggactagacgctactgtattgctttggacctttggtcttaaaacaataaaatgggaaactggtaatgatatttcacatcattaatataaaattatgttataatctgaatattcttctaatcttagctgcctgctagtttaggaaaatgctagtgaaatgtgtcattgaaagctgaagcttctcaagggataaaataacttttaattaagtgccttaactggttgtctccaagatttttttttctaacataaggcacttgtgttccagatctgaaaatccaggcctgagaactactgaacctgggtatgacctcaagacatttgtatttctccttttgcttttatatgtgcacattcttcattattcagcccgccctttttgcttctctctacattgttacaactgttatcaaactttactatattgttcctgcttttcccacagttattaatggtatttatacacggattaaattctgaaaaccattggcatatagatagaaatgaagagccacagtaattcctttgcctttctggaatagattgctaaattgaccaccagcagtgtgattccttttttaagttgccactagctgtattattttctcaaactattttggacaagttaacaacacaatgctacattatgtcagttaagattacagatatatgaatgtttggacctattgtgagcagaatgcatttttaaggtagccatgattatgacagatgtatctgttattattaccaaaattatcttaatccattgccttctcatgtaccatcaaattttaatgtagtcaattctaaggtcatgttgccattttatgtcttgtatttctttccttggtcatttctgtgatgcttgtctacgcaaataatgaaaataacatgaaaatatatgtttgtaaatatttaaataaggtgtgtggtgtgcctattttagcactgaaccaacatgttgaggcccatatagtggtagtaatgtgtactctgcaatttttctcgcccaaaatatcacaattataagcttattttctaggtttcattgaatgaatcattgttggttctttatatgaacttgtctcttttgccgggtcggcggaagaatgctgaccaaatttcattaagattgggagtataatacatatatcccgacattaaactgtcgagtcaaggcaaaagctttgaaacaaagcgagaaaaagcaaaggggaaaactatttacagaagcagcaactcaaaggtctactcctcactaaactgaaaaatactggcagctctccagaccatcacatcttctttaatgtctgcaaccagcgactccacagttttctccttttgatcgaagactcgagcatttcgttctttccaaatccgccagcaaaccaacatgaaggagtcaatatatgtttatatgaacttgtctcttcagtgcattacattgactgaacaagttgtgtttttgttgaaagtcaactaaacataagccagagctgagtaattattgatggaattttttgattcatcattaacctactgatatatatgcactgatatgccatgaacatcgaagttcatcatagcattaaagagatgtaaaaaaaaatgtacatatgcacttaataattgtattgctatgtgtgtgcaaatttagtaaagagagtaattagagtggtttcatgatagttaattagttgttctttcttgtgaattctgttgttacagcttggtttatcctccaatagctccacttggtcatgatgatgccttccctggccctggcgcaggcttctatcctcataggtttgtttacgattatgtaaaatatcaatgaagcatatgctaacataattaatagtttctgtttttgtttgcagtggtattggtgggggtggcagcatgcatgttggtaatatgacacccacagaacacaccctagaatctttctgttttatctttgtgcatctcggcagtctgatttacatttgtttcatacaacaggtccaaacgatccacgcttctttccttctaatcccttccctgtgccctttggtggccctgggtaatccactttatcttccactttgtcatttcattacccatgctgtcctttttattctgttataaatggacttaatatttgaaaataggagtgttccaccaggtggtcgttatgatccaattggtccaccagatgttccaggatttgaaccttctcgctttgtgaggtaagatagttcagcaacgtttttcatacaattattcttagcttatctctgatttccaagatcaccgactactgtactcaactcagtttttaaaacccatgaccaacagatcaaaccgtaaaccttcagacactgtctcagctgcagttgtaacaatagttttttattaacataatgatattagattagtgatatcctacatatttttatgttccttttgcatcgcaaaagctctaaaacagtgcatttgcatctagttaaaactgtcaatgcttacaggcaattctattttaattgggagatactctctgacgctctgatcaacgggcaatgctaacctatgaatttcttttcacacaggcgtccgaggcctccagctgggactactcacccagaccttgagttcttccagccggggccgcacgggcccttctgagattcagaggcccacctcctccccaccgtttctgaataaccctgccttgcttctcatgctgatccaaagagcagtttgtgagatagaactgctacaattgcgaatagccgtaccagactctgcctgtaaaaaattggatgcgaactcctgtatctgtcctcagttgcagtttaccatatactagtagtagtatgctattgtatcaacctatctttgtcacccttgcacacctgtactaatagtgacctgtggggtggattgctgatgaaatgcaaaccctcctgtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0548900, RefSeq:Os07g0548900