Os07g0552800

From RiceWiki
Revision as of 08:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0552800| Description = Cellulose synthase family protein| Version = NM_001066481.1 GI:115472694 GeneID:4343553| Length = 3016 bp| Definiti...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0552800

Description

Cellulose synthase family protein

Version

NM_001066481.1 GI:115472694 GeneID:4343553

Length

3016 bp

Definition

Oryza sativa Japonica Group Os07g0552800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22630523..22633538

Sequence Coding Region

22630579..22631589,22631681..22633339

Expression

GEO Profiles:Os07g0552800

Genome Context

<gbrowseImage1> name=NC_008400:22630523..22633538 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:22630523..22633538 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccaccgcggcttccacgatgtccgcagcggcggcagtgactcgccggatcaacgctgccctccgcgtggacgccaccagcggtgacgtcgcggccggcgccgacgggcagaacgggcgccggtcgcccgtggccaagcgggtgaacgacggcggtggcggcaaggatgacgtgtgggtggccgtcgacgaaaaggacgtgtgcggggcccgcggcggcgatggcgccgcccggccgccgctgttccggacgtacaaggtcaagggcagcatccttcatccttacaggttcctgatccttcttcgactgatcgccatcgtcgccttcttcgcgtggcgcgtacgtcacaagaaccgcgacggcgtgtggctgtggacaatgtccatggtcggcgacgtctggttcggcttctcgtgggtgctcaaccagctcccgaagctgagccccatcaagcgcgtcccggacctcgccgccctcgccgaccggcactccggcgacctacccggcgtcgacgtcttcgtcaccaccgtcgaccccgtcgacgagccgatactctacaccgtgaacaccatcctctccatcctcgccgccgactacccggtggacaggtacgcctgctacctgtccgacgacggcgggacgctggtccactacgaggccatggtggaggtcgccaagttcgccgagctgtgggtgcccttctgccggaagcactgcgtcgagccgaggtcgccggagaactacttcgcgatgaagacgcaggcgtacaaaggcggcgtccccggcgagctgatgagcgatcaccggcgtgtgcggcgagagtacgaggagttcaaggtcaggatcgactccctctcgagcaccattcgccagcgatcagatgtgtacaacgccaaacatgccggcgaaaatgcgacatggatggctgatggcacacattggcccggcacatggtttgagccggctgacaaccaccagagagggaaacatgctggaattgttcaggttttactgaaccatccaagctgtaaaccgaggcttggattggcggcgagtgctgagaatccggttgatttcagcggtgtcgacgtgcggctccccatgctggtgtacatctcgcgcgagaagaggcccggatacaaccaccagaagaaggccggcgccatgaacgtgatgctccgcgtgtccgcgctgctgtcgaacgcgccgttcgtcatcaacttcgacggcgaccactacgtcaacaactcgcaggcgttcagggcgccgatgtgcttcatgctcgacggccgcggccgcggcggcgagaacacggcgttcgtccagttcccgcagcggttcgacgacgttgacccgacggaccggtacgcgaaccataaccgcgtcttcttcgacggcaccatgctctccctcaacggcctccaggggccctcctacctcggcaccggcaccatgttccgccgcgtcgcgctctacggcgtggagccgccgcgctggggagcggcggcgagccagatcaaggctatggacatcgccaacaagttcggcagctcgacgtcgttcgtcggcacgatgctggacggcgccaaccaagaacggtcgatcacgccgctggcggtgctcgacgagtcggtcgctggcgatctcgccgccctgacggcgtgcgcatacgaggatgggacgtcgtgggggagagacgtcgggtgggtgtacaacatcgcgacggaggacgtggtgaccgggttccgcatgcaccggcaggggtggcgctccgtgtacgcctcagtggagcccgccgcgttccgcggcacggcgccgatcaacctcaccgagcgcctctaccagatcctccggtggtcgggcggctcgctggagatgttcttctcccacagcaacgcgctcctcgccggccgccgcctccacccgctgcagcgcgtcgcctacctcaacatgtcgacctacccgatcgtgaccgtgttcatcttcttctacaacctcttcccggtgatgtggctcatctccgagcagtactacatccagcggccgttcggcgagtacctcctctacctcgtcgccgtcatcgccatgatccacgtgatcggcatgttcgaggtgaagtgggctggcatcacgctgctcgactggtgccgcaacgagcagttctacatgatcggctccacgggggtgtacccgacggcggtgctgtacatggcgctcaagctcgtcaccgggaagggcatctacttccggctcacgtcgaagcagacgacggccagctccggcgacaagttcgccgacctgtacaccgtgcggtgggtgccgctgctgataccgaccatcgtcatcattgtcgtgaacgtcgccgccgtcggggtggcggtcggcaaggcggcggcgtgggggccgctcaccgagccggggtggctcgccgtgctcgggatggtgttcaacgtgtggatcctggtgctcctctacccgttcgcgctcggggtcatgggtcaatgggggaagcggccggccgtgctgttcgtggcgatggcgatggccgtcgccgccgtggcggccatgtacgtcgccttcggtgcaccgtaccaagctgagttgtcaggtggtgctgcttctctcggaaaagcggcggcgtcgctgaccgggccatccgggtag</cdnaseq>

Protein Sequence

<aaseq>MAATAASTMSAAAAVTRRINAALRVDATSGDVAAGADGQNGRRS PVAKRVNDGGGGKDDVWVAVDEKDVCGARGGDGAARPPLFRTYKVKGSILHPYRFLIL LRLIAIVAFFAWRVRHKNRDGVWLWTMSMVGDVWFGFSWVLNQLPKLSPIKRVPDLAA LADRHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLV HYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRRE YEEFKVRIDSLSSTIRQRSDVYNAKHAGENATWMADGTHWPGTWFEPADNHQRGKHAG IVQVLLNHPSCKPRLGLAASAENPVDFSGVDVRLPMLVYISREKRPGYNHQKKAGAMN VMLRVSALLSNAPFVINFDGDHYVNNSQAFRAPMCFMLDGRGRGGENTAFVQFPQRFD DVDPTDRYANHNRVFFDGTMLSLNGLQGPSYLGTGTMFRRVALYGVEPPRWGAAASQI KAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWG RDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGG SLEMFFSHSNALLAGRRLHPLQRVAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQ RPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMA LKLVTGKGIYFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVIIVVNVAAVGVAVGK AAAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVA AMYVAFGAPYQAELSGGAASLGKAAASLTGPSG</aaseq>

Gene Sequence

<dnaseqindica>57..1067#1159..2817#caaggaggagccacggacaaggaggagctagctagtgaaataggtgtgttccgtgcatggcggccaccgcggcttccacgatgtccgcagcggcggcagtgactcgccggatcaacgctgccctccgcgtggacgccaccagcggtgacgtcgcggccggcgccgacgggcagaacgggcgccggtcgcccgtggccaagcgggtgaacgacggcggtggcggcaaggatgacgtgtgggtggccgtcgacgaaaaggacgtgtgcggggcccgcggcggcgatggcgccgcccggccgccgctgttccggacgtacaaggtcaagggcagcatccttcatccttacaggttcctgatccttcttcgactgatcgccatcgtcgccttcttcgcgtggcgcgtacgtcacaagaaccgcgacggcgtgtggctgtggacaatgtccatggtcggcgacgtctggttcggcttctcgtgggtgctcaaccagctcccgaagctgagccccatcaagcgcgtcccggacctcgccgccctcgccgaccggcactccggcgacctacccggcgtcgacgtcttcgtcaccaccgtcgaccccgtcgacgagccgatactctacaccgtgaacaccatcctctccatcctcgccgccgactacccggtggacaggtacgcctgctacctgtccgacgacggcgggacgctggtccactacgaggccatggtggaggtcgccaagttcgccgagctgtgggtgcccttctgccggaagcactgcgtcgagccgaggtcgccggagaactacttcgcgatgaagacgcaggcgtacaaaggcggcgtccccggcgagctgatgagcgatcaccggcgtgtgcggcgagagtacgaggagttcaaggtcaggatcgactccctctcgagcaccattcgccagcgatcagatgtgtacaacgccaaacatgccggcgaaaatgcgacatggatggctgatggcacacattggcccggcacatggtttgagccggctgacaaccaccagagagggaaacatgctggaattgttcaggtatttgcgcactatacatgtttaatttctgtttccaatcttgtccgggcaaattgtatcagagtgaatggtttttgtgtgtttttgataggttttactgaaccatccaagctgtaaaccgaggcttggattggcggcgagtgctgagaatccggttgatttcagcggtgtcgacgtgcggctccccatgctggtgtacatctcgcgcgagaagaggcccggatacaaccaccagaagaaggccggcgccatgaacgtgatgctccgcgtgtccgcgctgctgtcgaacgcgccgttcgtcatcaacttcgacggcgaccactacgtcaacaactcgcaggcgttcagggcgccgatgtgcttcatgctcgacggccgcggccgcggcggcgagaacacggcgttcgtccagttcccgcagcggttcgacgacgttgacccgacggaccggtacgcgaaccataaccgcgtcttcttcgacggcaccatgctctccctcaacggcctccaggggccctcctacctcggcaccggcaccatgttccgccgcgtcgcgctctacggcgtggagccgccgcgctggggagcggcggcgagccagatcaaggctatggacatcgccaacaagttcggcagctcgacgtcgttcgtcggcacgatgctggacggcgccaaccaagaacggtcgatcacgccgctggcggtgctcgacgagtcggtcgctggcgatctcgccgccctgacggcgtgcgcatacgaggatgggacgtcgtgggggagagacgtcgggtgggtgtacaacatcgcgacggaggacgtggtgaccgggttccgcatgcaccggcaggggtggcgctccgtgtacgcctcagtggagcccgccgcgttccgcggcacggcgccgatcaacctcaccgagcgcctctaccagatcctccggtggtcgggcggctcgctggagatgttcttctcccacagcaacgcgctcctcgccggccgccgcctccacccgctgcagcgcgtcgcctacctcaacatgtcgacctacccgatcgtgaccgtgttcatcttcttctacaacctcttcccggtgatgtggctcatctccgagcagtactacatccagcggccgttcggcgagtacctcctctacctcgtcgccgtcatcgccatgatccacgtgatcggcatgttcgaggtgaagtgggctggcatcacgctgctcgactggtgccgcaacgagcagttctacatgatcggctccacgggggtgtacccgacggcggtgctgtacatggcgctcaagctcgtcaccgggaagggcatctacttccggctcacgtcgaagcagacgacggccagctccggcgacaagttcgccgacctgtacaccgtgcggtgggtgccgctgctgataccgaccatcgtcatcattgtcgtgaacgtcgccgccgtcggggtggcggtcggcaaggcggcggcgtgggggccgctcaccgagccggggtggctcgccgtgctcgggatggtgttcaacgtgtggatcctggtgctcctctacccgttcgcgctcggggtcatgggtcaatgggggaagcggccggccgtgctgttcgtggcgatggcgatggccgtcgccgccgtggcggccatgtacgtcgccttcggtgcaccgtaccaagctgagttgtcaggtggtgctgcttctctcggaaaagcggcggcgtcgctgaccgggccatccgggtagggacagttcgatcgcgtttgatttgatttgaatatttgattattttcttggtgcaataattggttgttacttctgttatgtcgttacgtcataggagcggctgactatattgctagtctgctctatacgagtgagacttggattgttcttctttaaaaatgacaagatttgaatttctccagcgtgatttgtcgacttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0552800, RefSeq:Os07g0552800