Os07g0564600

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Revision as of 08:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0564600| Description = Similar to Secretory carrier membrane protein| Version = NM_001066539.1 GI:115472810 GeneID:4343617| Length = 4562 b...")
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Gene Name

Os07g0564600

Description

Similar to Secretory carrier membrane protein

Version

NM_001066539.1 GI:115472810 GeneID:4343617

Length

4562 bp

Definition

Oryza sativa Japonica Group Os07g0564600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23287854..23292415

Sequence Coding Region

23288209..23288295,23288493..23288558,23288715..23288763,23289229..23289296,23289387..23289432
,23289510..23289603,23289693..23289755,23290173..23290295,23290880..23290913
,23291226..23291288,23291415..23291522,23291651..23291713,23292059..23292115

Expression

GEO Profiles:Os07g0564600

Genome Context

<gbrowseImage1> name=NC_008400:23287854..23292415 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23287854..23292415 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggcgctacgacagcaaccccttcgaggaggacgacgtgaaccctttctcggaacaagcgcgtggtaaggctggagggcagcccagctatggcggcggcgcgttctacatgccgaatccacggaatgtgccttctgtgtcgtcgaattcgcggctttcgcctcttccccctgagcccgcagcttttggggctacggtggatatccctcttgactcttccaaggacctgaagaatagggaaaaggagctgcaagctagggaagcggaattgaacaagagggagaaggagctaaaaaggagggaggaggctgcagcgcgagctggtattgtcattgaggagaaaaactggcctccatttctgccactcatccatcatgatatcaccaatgagataccgagtcaccttcaaagaatgcaatatgttgcatttgcatcatttcttggattggcttgctgtctcttctggaacgtcatagcagttacttcagcttgggtcaagggggaaggcgtgaagatatggttgctggcaatcatctacttcatctctggggttcctggtgcatatgttttatggtatcgacctctgtataatgctatgaggactgatagtgccttgaagtttggattgttcttcttggtttacctgttccatattcttttctgtgtattttctgctgtggctcctcctgttgtcttcgaggggaaatcattggcggggattttaccagcaattgatctcatcagcaagaatgctttggtggggatcttctactttgttggatttggattgttctgcgtcgaatcattgctcagcatctgggttatccagcaagtgtacatgtacttccgaggaagtggaaaagctgctgagatgaagcgtgatgcaactaggggtgctatgcgggcagctttttaa</cdnaseq>

Protein Sequence

<aaseq>MAGRYDSNPFEEDDVNPFSEQARGKAGGQPSYGGGAFYMPNPRN VPSVSSNSRLSPLPPEPAAFGATVDIPLDSSKDLKNREKELQAREAELNKREKELKRR EEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVI AVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLF HILFCVFSAVAPPVVFEGKSLAGILPAIDLISKNALVGIFYFVGFGLFCVESLLSIWV IQQVYMYFRGSGKAAEMKRDATRGAMRAAF</aaseq>

Gene Sequence

<dnaseqindica>4121..4207#3858..3923#3653..3701#3120..3187#2984..3029#2813..2906#2661..2723#2121..2243#1503..1536#1128..1190#894..1001#703..765#301..357#ggttacaagctgcagaagtgcagaggccattccgttccgcgtgtgtgcgcgtccacccgcctccccctccccttcttcaccgagagtcgtcgcggtcactcgtccgtatctgcctcggtgggggcggcggtgcgtgcgtgcgtgcgcggccgctgtatttggcaggactcctcgtctcgtcgtctccctctcccccgagaaaaccccaccccactactcctctccaccgccatcattgtcggcgcgagcgagagcccaagcccaagccgacccccgagggaaggggaagacggggccgagatggcggggcgctacgacagcaaccccttcgaggaggacgacgtgaaccctttctcggtgaggaacccatcctctccctccctccctttctccacgttcccgccgggcgcagcggatctggtttcgtgtttccttgcccttctcctccgtgcgcgttctgaggagtggcgtgtgtgttcttcgttcgtggttggatctggttggcggccgcagatctaaccgtgtgccgtgggtgaatcggtggccgtttttattgttttttttttctcgcattgtagtatcaccgacgctaaatttagggggatttttttttatttggggggtgttgcgatgattgcattggtgcctaaaccctcgtttgtgcgggcacggatgaatttgttttcgtttgtttctctgtaggaacaagcgcgtggtaaggctggagggcagcccagctatggcggcggcgcgttctacatgccggtaagctgttcggtgttctgttcttctcagttggaccattttgtcggtgcctcggtgggggttgaatacttgaattcgcaattattggtttgttacctaccaactgtttaatctgtactgcaatgcagaatccacggaatgtgccttctgtgtcgtcgaattcgcggctttcgcctcttccccctgagcccgcagcttttggggctacggtggatatccctcttgactcttccaaggtttgtatgaatgtgtagtttatccgtctcagttgaactgcagctagactgcagtacagtagaggatctttcatggaatagtacctaatgtcgctttttactaatgtgtgatgtatggatactcaggacctgaagaatagggaaaaggagctgcaagctagggaagcggaattgaacaagagggagaaggtacaccatgaacatatgcagttgtatcacccattagttgtgtccattacgataggtcaacaaaagagtttgttgtaatctgatgcttcttggtcttaattttttgtgcgaaacacagcagacatcagtccttagcctgaagtattcagaatcataaattcgtaatgcagtgttcttttcctctctaaaaatcagcttactacctgcacaaggaattctatgctttacttagacataattagtttgatccatgatggtttgttagtttgtgattgttacatttatacattattatcttcatttgttgaccaggagctaaaaaggagggaggaggctgcagcgcgaggtaaaagctcattttctttactcactaattcatagaaacaatgttgctttgtaatattctctgttgactcatgtgatcataaggattccttatattagaactatgccatttaagatattacatagtacaaactatgaggtaatgtggcaatgatatgtgactcttaatctgttacatgtgaattgcgattgtgtgaaatgcaactgcaatgttgtattggtaacgtcattagcgagagtttctcaaaccaagtatttttttagacgaaaggtccaaaggacccagcttttactgaaagccaaagtggcagcgctgggggaaaccagcttacagtgtagcacaggttagaaaggccacaccccggcctggataagtgacagataaaagggaatctcaaaacaagtgtatcttactatttttttcaaaaatgttatccgtataccgtgtagctttcatgatagagctgtagatccttgtagttcattttagaataacaaggtgttcagactaatataacttatgcattaaacatttctcacgggctattaaacttatgccactttattggtataacacttttgcagctggtattgtcattgaggagaaaaactggcctccatttctgccactcatccatcatgatatcaccaatgagataccgagtcaccttcaaagaatgcaatatgttgcatttgcatcatttcttggtatgcttctgattgtcagattcccaaaatcttgatgctcttgcacttcggtaacgttttaactgcataatggacaagcattttagtcttctacaaagtttgcattttcacccttctttcagaaattctgcaccttcaactgtaaaactggaaaggcaaattttccagtctcctacgatcttagtcacatgttttatcattagaatttcgttagtgagattttgtgactgtctgcattgcaagtcaagttaataagaattctaaaacaatagggatgagcttttgagattttcttaattatattcaagttctgccatttatttttctagttagaaataaaaggctgtcttatgaattatttcaacattccattctgttatatgcaaaattaagacaactttttttggtgtcgagtaggattggcttgctgtctcttctggaacgtcatagcagttacttcagcttgggtcaagggggaaggtatactcatgacacttctggcgttgcttgtacatattgaccagttctttaaggctgtaatcctttaataatgctatgtccattttcaggcgtgaagatatggttgctggcaatcatctacttcatctctggggttcctggtgcatatgttttatggtatcgacctctgtataatgctatgaggtattgtttctgcgaacttctccgtgcttttcttgtgtatatgagtaagtaacatttattggacacttgttttgtaggactgatagtgccttgaagtttggattgttcttcttggtttacctggtaagtgaggagtccttgttatatgttagtaagatattcggtgattttgaatgtgtgggaacataattcttgaatttcctgtctttgcagttccatattcttttctgtgtattttctgctgtggctcctcctgttgtcttcgaggggaaatcattggcgtaagttccctgcttgttcatattctgtcaatgggaatatggaaactgaaactaaaagggtgacctacttgcatgttgtacaaatggctttttttatcagtgaagtggtctgcttgtctatgcaagttttgatgcacctgctttccagcaatataatattgacgcataagaacattgtactatttgatttaacttccctggatgttggagtttccttagttgagcttaagttatgattcatgaagtggtagtatattcatcttttcaatagaaacaacaaaaaataggcacttcaatatgtgggatctgaagctcctctgtttaacacatacataaatactaaaaaaaatatgattggatggatttcttcttagctagtgtagcgaggagggtgggcctaaggattctctagtgtctgtgagagttgaacttgcatgaactaatgcttattttatactcccgcagggggattttaccagcaattgatctcatcagcaagaatgctttggtgggggtaagtgtgcatcgcattattgttagatgctaagtaactatggttagatatgcagtttttgattcatgaagataatcaacttacctttcagatgcctaccgaaaaaactctttctgatcttgtcggtcaagtaattggtgtaatttttctttgcagatcttctactttgttggatttggattgttctgcgtcgaatcattgctcagcatctgggttatccaggtcagtcctgcgaataacaaatactccctccgtttcatattataagactttctagcattgcccatattcatatagatgttaataaatctagacatatgtgtctagaaagtcttataatataaaacggagaaagtatgtttttatgaaataaattctcaagtagtctatctgagccgttttgacatttgtgaatgcagcaagtgtacatgtacttccgaggaagtggaaaagctgctgagatgaagcgtgatgcaactaggggtgctatgcgggcagctttttaattatcagaaaagattattggtccgactcatatctctgatggaatggatagattgtggtataaacgaacatatatgttttccctgtttgctgactacaatttcaaattgttagtaggttacagtgacgttgtatgacctgtcctcttgattcatcaatatagagaatgtgcagttgttacttgttacaggctttacagctggtgttactagcgtagaacattttcgttttcgtctgggctaaaaaagtataaatcgacaccaatgaatgattcagcccatgaaagaattctctttgttatatgtacaggaaacaaatcagataggcaatcaaatgctatttgttggtgactcgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0564600, RefSeq:Os07g0564600