Os07g0568600

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Revision as of 08:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0568600| Description = Similar to Calcium-dependent protein kinase| Version = NM_001066566.1 GI:115472864 GeneID:4343644| Length = 3979 bp|...")
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Gene Name

Os07g0568600

Description

Similar to Calcium-dependent protein kinase

Version

NM_001066566.1 GI:115472864 GeneID:4343644

Length

3979 bp

Definition

Oryza sativa Japonica Group Os07g0568600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23518753..23522731

Sequence Coding Region

23519156..23519308,23519473..23519703,23519898..23520065,23520162..23520277,23520590..23520742
,23520978..23521121,23521321..23521444,23521863..23522426

Expression

GEO Profiles:Os07g0568600

Genome Context

<gbrowseImage1> name=NC_008400:23518753..23522731 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23518753..23522731 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgctgcgtgacgccggagggcagcggccgcgggaggaagaaacagcagcaggagcagaagcagaagcagaaggagccgaagcagcagcagcagcagcagaagaaggggaagaagccgaacccgttctcgatcgagtacaaccggtcgtcggcgccgtcggggcacaggctggtggtgctgcgcgagccgacggggcgggacatcgccgcgcggtacgagctgggcggggagctcgggcgcggcgagttcggggtcacctacctctgcacggagcgggagacgggggacgcctacgcgtgcaagtccatctccaagaagaagctccgcaccgccgtggacatcgaggacgtgcgccgggaggtggacatcatgcgccacctccccaagcaccccaacatcgtcacgctccgggacacctacgaggacgacaatgccgtccacctcgtcatggagctctgcgagggcggggagctcttcgaccggatcgtcgcccggggccactacaccgagcgcgccgccgcgctggtcacccgcaccatcgtcgaggtcgtgcagatgtgccataagcatggagtgatgcaccgggacctcaaaccagagaatttcttgtttgcaaacaagaaggaaactgcagctctgaaggcaattgattttggcctgtctgtttttttcaccccaggtgaacggttcactgagattgtcggaagcccttattacatggctcctgaggtgctaaagagaaattatggccctgaggttgatgtttggagtgcaggagtgatcctttacattcttctttgtggagtccctccattttgggcagaaactgaacagggtgttgctcaggcaattatccgttctgtcattgacttcaagagagacccatggccaagggtctcagataatgcaaaggatcttgtcaagggaatgctcaatccagaccctaggcggcggctaaatgctcaacaagtgcttgatcatccttggttacagaacattaagaaggctccaaatgtaaatttaggcgaaactgttaaggccagacttcaacaattctctgtgatgaacaagttcaagaagcatgcacttagggtcatagctgagcatctttcagtagaagaggttgctggtataaaggacatgtttgagaagatggatctcaacaaagataatatgattaattttgatgagctgaagcttggcctgcataaacttgggcaccaaatggctgatgcagatgtccaaatactaatggatgctgcggatgtcgatggaaatggatctttagactacggggagtttgttgctctatctgttcacctgagaaagattggcaacgatgagcatctgcacaaggcatttgcatactttgatcggaaccagagtggatatattgaaatcgatgagctccgtgaatcattggctgatgacctgggagcaaatcatgaagaggttatcaatgccatcatccgtgatgtagacactgataaggatggcaagataagctatgatgagtttgcggcaatgatgaaggccggaacagattggaggaaagcctcaagacaatattcaagagaacggttcactagcctcagcctaaaacttcagaaagatggatcattgcagttaacaactacccaatag</cdnaseq>

Protein Sequence

<aaseq>MGNCCVTPEGSGRGRKKQQQEQKQKQKEPKQQQQQQKKGKKPNP FSIEYNRSSAPSGHRLVVLREPTGRDIAARYELGGELGRGEFGVTYLCTERETGDAYA CKSISKKKLRTAVDIEDVRREVDIMRHLPKHPNIVTLRDTYEDDNAVHLVMELCEGGE LFDRIVARGHYTERAAALVTRTIVEVVQMCHKHGVMHRDLKPENFLFANKKETAALKA IDFGLSVFFTPGERFTEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFW AETEQGVAQAIIRSVIDFKRDPWPRVSDNAKDLVKGMLNPDPRRRLNAQQVLDHPWLQ NIKKAPNVNLGETVKARLQQFSVMNKFKKHALRVIAEHLSVEEVAGIKDMFEKMDLNK DNMINFDELKLGLHKLGHQMADADVQILMDAADVDGNGSLDYGEFVALSVHLRKIGND EHLHKAFAYFDRNQSGYIEIDELRESLADDLGANHEEVINAIIRDVDTDKDGKISYDE FAAMMKAGTDWRKASRQYSRERFTSLSLKLQKDGSLQLTTTQ</aaseq>

Gene Sequence

<dnaseqindica>3424..3576#3029..3259#2667..2834#2455..2570#1990..2142#1611..1754#1288..1411#306..869#gggagatctttgaccagcacccccgtcttctcctaccttcctcctcccctcctccgcggcctcgtcgttggctttaccactggcggattcccacacgccccccagccgccgccacggctgaccccgtctccccaccgaatccaccccacctcccaatttaaccccctcctcctcctcctcccccctctcgcctccttctcctccctcccccaacgcgtcacgccgccatttcttggcctcccactcgccgcagatctttgattcgcggggggttcttgcgtcgcgcggatcttggctgaagcgagatgggcaactgctgcgtgacgccggagggcagcggccgcgggaggaagaaacagcagcaggagcagaagcagaagcagaaggagccgaagcagcagcagcagcagcagaagaaggggaagaagccgaacccgttctcgatcgagtacaaccggtcgtcggcgccgtcggggcacaggctggtggtgctgcgcgagccgacggggcgggacatcgccgcgcggtacgagctgggcggggagctcgggcgcggcgagttcggggtcacctacctctgcacggagcgggagacgggggacgcctacgcgtgcaagtccatctccaagaagaagctccgcaccgccgtggacatcgaggacgtgcgccgggaggtggacatcatgcgccacctccccaagcaccccaacatcgtcacgctccgggacacctacgaggacgacaatgccgtccacctcgtcatggagctctgcgagggcggggagctcttcgaccggatcgtcgcccggggccactacaccgagcgcgccgccgcgctggtcacccgcaccatcgtcgaggtcgtgcaggtgagattggtagcttcggtgatttctctattccttcgttgctttctactgtattttctgaaatgatcctgtttgatttcttgtcgtcgttatcgatgaggtagtctcacagtataatgaaaagaaatcgagttcactggtggagatttatggtagaattgttactagatgacaacaactgaaaagttcatgtttttatctgcttttgtttctccaataatgtgggaatcgttttcttttgctacatgccagatgattctgttgtctatttgtctgattaattagactctgatcagtttcggttttagttagttatccatgcctgcctctttgaattggtaactagattgttgcaacttcttttttcttccatagtgtgatgaataacgtgtatttttgtctgtctgtaaaacatcagatgtgccataagcatggagtgatgcaccgggacctcaaaccagagaatttcttgtttgcaaacaagaaggaaactgcagctctgaaggcaattgattttggcctgtctgtttttttcaccccaggtacagtctaacagtcgcaatgtccttatttcctatatctcaagcgtgctgttttaatttgtcagtcagttctcagttgtcaaatgatgacttcacagtgcctctagaagggcttaccttaggttgtctattcacattgtatacgtgcgtgtatatatttttccgatgggctaattaagtgattattgattatgtgcaggtgaacggttcactgagattgtcggaagcccttattacatggctcctgaggtgctaaagagaaattatggccctgaggttgatgtttggagtgcaggagtgatcctttacattcttctttgtggagtccctccattttgggcaggttagttttgtacatgaattcttcaattctgataaccaaatgtataaactaaattaaatactacgtatttagtgtatagaagttgacctcttctgatcacatttctgcactaatgcagtctgcgacattagaaactgtcaatctttacttttgtctgtgtctgttgtagacctggcaatgttgtaatgttgaatgctattcctgatccttcttttgtttccatgttataatgcagaaactgaacagggtgttgctcaggcaattatccgttctgtcattgacttcaagagagacccatggccaagggtctcagataatgcaaaggatcttgtcaagggaatgctcaatccagaccctaggcggcggctaaatgctcaacaagtgcttggtaataatcaatttgcacactggtttaatatattgtatttttttccttctgttcttgactgatacagaaactttccaaccattggtatttcttttgttctttaacaataccaaaaattttcaagcttgaaaatgtggtggttctgagttacaaagatctataacttgttaacttctaatccaagatatcacagaccttgcaaaaggatgagtaaagaaatgataaagcttaatgattttctgaagatgttatcccttatatcatttaacttggttgtttttggctgacaaccttatcttgtatttcttccagatcatccttggttacagaacattaagaaggctccaaatgtaaatttaggcgaaactgttaaggccagacttcaacaattctctgtgatgaacaagttcaagaagcatgcacttagggtatactcctcagcctgacctgaccctcaaacctaactatggcttttcaatagtagtcttgtttgctctggattctcacattttgttttactacaggtcatagctgagcatctttcagtagaagaggttgctggtataaaggacatgtttgagaagatggatctcaacaaagataatatgattaattttgatgagctgaagcttggcctgcataaacttgggcaccaaatggctgatgcagatgtccaaatactaatggatgctgtgagttaccctaagccacccttcttcctctctccccaaacacccctccaaattttgggaaaaaaatgggaaactatctttatatcttgttgaactagaaaagattatttgctctcgaatgcatttttcccaaactattgttgtgaatgactactgggtttcgtatatttactatttatccatggttatgccaggcggatgtcgatggaaatggatctttagactacggggagtttgttgctctatctgttcacctgagaaagattggcaacgatgagcatctgcacaaggcatttgcatactttgatcggaaccagagtggatatattgaaatcgatgagctccgtgaatcattggctgatgacctgggagcaaatcatgaagaggttatcaatgccatcatccgtgatgtagacactgataaggtttgtggctcttcattgactagttttaagaaattgatagactgctagttttttcttcttcaaatagtttaattaatttggtggtgtgcacaaaatgttttgacataatgattcatagcacacatgactctgaaagtattaatagcattgttctgtactttcaggatggcaagataagctatgatgagtttgcggcaatgatgaaggccggaacagattggaggaaagcctcaagacaatattcaagagaacggttcactagcctcagcctaaaacttcagaaagatggatcattgcagttaacaactacccaatagatagatgacggaataggcaagttgtgaattccccagatgaaaaccttgtgtagctttcctggttctttgttgacgactattttcttccgttctcatttctcgagatttccactgctctatttttcattttggtgccccgtatgaagcattaggtgattgttggaaggtttgtttgtttgtttgtatttagattatattgatccatgccccacgggtggccaaacatttggcgaaatgtactgtacaagagaaaggaaaaggaagtaggtggtttttgtgcattcctaaccttgttctgttttattactcctttttcctaagaatgcttggtttatactctgaaactgaaagtcagagactgaacttacaacacacgcaatggatggtccaaaatctgttggct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0568600, RefSeq:Os07g0568600