Os07g0569800

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Revision as of 08:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0569800| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001066576.1 GI:115472884 GeneID:4343654|...")
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Gene Name

Os07g0569800

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001066576.1 GI:115472884 GeneID:4343654

Length

1957 bp

Definition

Oryza sativa Japonica Group Os07g0569800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23595780..23597736

Sequence Coding Region

23595851..23597617

Expression

GEO Profiles:Os07g0569800

Genome Context

<gbrowseImage1> name=NC_008400:23595780..23597736 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23595780..23597736 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctccactcgacggcggtggattgctcggcgtcttcaccaacagcactggcatgaatccgtccgccgccgccccgatcgtcgcggtggagttcgacacgttccaaaatgagtgggaccagagcagcgaccacatcggcatcgacgtcaactccatcaactcgaccgcggtgaagttgctgtctgaccgcagcctctccaacgtcaccgagccgatggttgcgtcggtgagctacaacaacagcacaaggatgctggccgtcatgctgcagatggccccccaagatggcggcaagaggtacgagctcaacagcacggttgacctcaagagcttgctccccgcgcaggtggccatcggattctcggcggcgagcgggtggtccgaggagcggcaccaagtactcacctggtctttcaattcgacattggtggcgtctgaagaacggagagaaaacgcaacgcgaggtaggccggccgctgcggtgcttgcaggtgtcgttgtagcatccgtcgtcgtcgtcggggcctcgatctgtttgtttgtaatgatcaggcggcgtaggatatctcgccggcggacgagagaagagtacgagatgggcggctccgacgacttcgacatgaacgatgagttcgagcaaggcaccggtccgaggcgatttctgtacagccaactggccaccgcgacgaacgacttctccgaggacgggaagctcggggagggtggcttcgggtcggtgtacaggggcgtcttgagcgaaccggccggcgtccacgtcgccgtcaagaggatctccaagacctccaagcaggggaggaaggagtacgcctccgaggtgagcatcatcagccgcctccggcaccggaacctggtgcagctcgtcggctggtgccacggccgcggcgacttcctcctcgtctacgagctggtgcccaacggtagcctcgacgcgcacctctacggcggcggcgcgacgctgccgtggccgaccaggtacgagatcgcgctcgggctcggctcggcgctgctctacctgcactccggctacgagaagtgcgtggtgcacagggacatcaagcccagcaacatcatgctcgactccgccttcgccgccaagctcggcgacttcgggctggcgaagctcgtcgaccacggcgacgcctcgcagacgacggcggtcctggcggggacgatggggtacatggacccggagtacgcggcctccggcaaggcgagcaccgcgtccgacgtctacagcttcggcatcgtgctgctggagatgtgctgcgggaggaggcccgtgctgctccaagaacaatccatcaggtcccgcctcctcgagtgggtctgggacctccacggccgcggcgccatcctcgaggcggccgacgagcggctgcgcggcggcgagctcgagctcgacgcgaagcaggtggagtgcgtgatggtcgtggggctctggtgcgcgcacccggaccgcggcgtgcggccgtccatcaagcaggcgctcgccgcgctccagttcgaggctccgctgccggctcttcctccgacgatgcccgtgccgacgtactcctccttgccgagccttgcattgtactgcgacgcggcggcagctagctcgtcgtcatccagtgcagggttttcttcttccacgagtggcgagcgttcgtcgacgagctcctctgcagcaaccgccgagtcgtcgtggctacttaagcacaacaacaggggcagtgaaaaaatagtattaggcaacaattga</cdnaseq>

Protein Sequence

<aaseq>MSPLDGGGLLGVFTNSTGMNPSAAAPIVAVEFDTFQNEWDQSSD HIGIDVNSINSTAVKLLSDRSLSNVTEPMVASVSYNNSTRMLAVMLQMAPQDGGKRYE LNSTVDLKSLLPAQVAIGFSAASGWSEERHQVLTWSFNSTLVASEERRENATRGRPAA AVLAGVVVASVVVVGASICLFVMIRRRRISRRRTREEYEMGGSDDFDMNDEFEQGTGP RRFLYSQLATATNDFSEDGKLGEGGFGSVYRGVLSEPAGVHVAVKRISKTSKQGRKEY ASEVSIISRLRHRNLVQLVGWCHGRGDFLLVYELVPNGSLDAHLYGGGATLPWPTRYE IALGLGSALLYLHSGYEKCVVHRDIKPSNIMLDSAFAAKLGDFGLAKLVDHGDASQTT AVLAGTMGYMDPEYAASGKASTASDVYSFGIVLLEMCCGRRPVLLQEQSIRSRLLEWV WDLHGRGAILEAADERLRGGELELDAKQVECVMVVGLWCAHPDRGVRPSIKQALAALQ FEAPLPALPPTMPVPTYSSLPSLALYCDAAAASSSSSSAGFSSSTSGERSSTSSSAAT AESSWLLKHNNRGSEKIVLGNN</aaseq>

Gene Sequence

<dnaseqindica>72..1838#actagtcagacaaggccaagtacgcacccagcgacgggcttgccttcttcctgtcaccctatccgtcaaagatgtctccactcgacggcggtggattgctcggcgtcttcaccaacagcactggcatgaatccgtccgccgccgccccgatcgtcgcggtggagttcgacacgttccaaaatgagtgggaccagagcagcgaccacatcggcatcgacgtcaactccatcaactcgaccgcggtgaagttgctgtctgaccgcagcctctccaacgtcaccgagccgatggttgcgtcggtgagctacaacaacagcacaaggatgctggccgtcatgctgcagatggccccccaagatggcggcaagaggtacgagctcaacagcacggttgacctcaagagcttgctccccgcgcaggtggccatcggattctcggcggcgagcgggtggtccgaggagcggcaccaagtactcacctggtctttcaattcgacattggtggcgtctgaagaacggagagaaaacgcaacgcgaggtaggccggccgctgcggtgcttgcaggtgtcgttgtagcatccgtcgtcgtcgtcggggcctcgatctgtttgtttgtaatgatcaggcggcgtaggatatctcgccggcggacgagagaagagtacgagatgggcggctccgacgacttcgacatgaacgatgagttcgagcaaggcaccggtccgaggcgatttctgtacagccaactggccaccgcgacgaacgacttctccgaggacgggaagctcggggagggtggcttcgggtcggtgtacaggggcgtcttgagcgaaccggccggcgtccacgtcgccgtcaagaggatctccaagacctccaagcaggggaggaaggagtacgcctccgaggtgagcatcatcagccgcctccggcaccggaacctggtgcagctcgtcggctggtgccacggccgcggcgacttcctcctcgtctacgagctggtgcccaacggtagcctcgacgcgcacctctacggcggcggcgcgacgctgccgtggccgaccaggtacgagatcgcgctcgggctcggctcggcgctgctctacctgcactccggctacgagaagtgcgtggtgcacagggacatcaagcccagcaacatcatgctcgactccgccttcgccgccaagctcggcgacttcgggctggcgaagctcgtcgaccacggcgacgcctcgcagacgacggcggtcctggcggggacgatggggtacatggacccggagtacgcggcctccggcaaggcgagcaccgcgtccgacgtctacagcttcggcatcgtgctgctggagatgtgctgcgggaggaggcccgtgctgctccaagaacaatccatcaggtcccgcctcctcgagtgggtctgggacctccacggccgcggcgccatcctcgaggcggccgacgagcggctgcgcggcggcgagctcgagctcgacgcgaagcaggtggagtgcgtgatggtcgtggggctctggtgcgcgcacccggaccgcggcgtgcggccgtccatcaagcaggcgctcgccgcgctccagttcgaggctccgctgccggctcttcctccgacgatgcccgtgccgacgtactcctccttgccgagccttgcattgtactgcgacgcggcggcagctagctcgtcgtcatccagtgcagggttttcttcttccacgagtggcgagcgttcgtcgacgagctcctctgcagcaaccgccgagtcgtcgtggctacttaagcacaacaacaggggcagtgaaaaaatagtattaggcaacaattgattagatcatatctttagtttgatgccaccttgatgttgcttagctcttcgttgtttatgtgtattgttcttccttgggccgccgtgtcatttgtgatatgtacctcaattcatatctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0569800, RefSeq:Os07g0569800