Os07g0571100

From RiceWiki
Revision as of 08:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0571100| Description = Conserved hypothetical protein| Version = NM_001066584.1 GI:115472900 GeneID:4343665| Length = 4314 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0571100

Description

Conserved hypothetical protein

Version

NM_001066584.1 GI:115472900 GeneID:4343665

Length

4314 bp

Definition

Oryza sativa Japonica Group Os07g0571100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23711482..23715795

Sequence Coding Region

23711482..23712849,23712939..23713373,23713454..23713538,23713625..23713694,23713787..23714030
,23714133..23714219,23714392..23714443,23714567..23714963,23715061..23715385
,23715485..23715651,23715744..23715780

Expression

GEO Profiles:Os07g0571100

Genome Context

<gbrowseImage1> name=NC_008400:23711482..23715795 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23711482..23715795 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcggcgtgccggttccgaggaaggctcggtcagcttctacaaagaggagttcgcacgagtggtcggtccccggcggtggaagcagcggcggcggcggcagcggtagcgtcgctggagacacctcacagatccagcggccgtcctcacggccgatctctccagcgtccggctctaccaccggacctgcaaggaagaagctgaaacatcttggtggcagtgggagcagcggcgcttcagggcaagcacccaagcagcggccttcgccggcatcagctccgtcgacagcgccaccgcagcctcccccgccgaagatttcgaagtcgccgtctttcattcaggaggagatcgaggtcgccgaagttctcttcggcctcacgaggcagttcccgtgtccttccaagccagtggagagcaaccacaagctggaggtcagggacgccccggaggccaagtccgggaactcctcgccggccccgtcgtcctcggttgcacggccatccgattcgacatccgttgctacaatagcgccaaagaggaagcggccacggctcgtcaagtacgacgacgatgtccggccagcgagcccggcgaagccagacttggctgagccgtcctcgaggccagagacgcttccggcatcaagatcggatgcaaaggcgtcggtgtcggccgctaccgacagtggcaccaccaccgccaccgctggtgcgcagcacgaggctatgcgggagcaggagaagagggaggaccataggagtcgagattcggagctccggccaggcgaatcagatcgccgggatcacaggccggagagccgggcagagccgacgccgccggcgcagccctcaggcaagccggatggtgaatcggcggcggtcgtctccgaggctaggaacggcgaggccaccgccgcgacaaagattgagctggcatctgatggagctcggcaagaaaagttttgcattgatctcatggctcctcctcctgggaagtctcctgatagagatggtgcttccgaccctgatgtggataagaagggattggattctgagatggacatggctgcgagaggaaattccgaaaagaaagacgcagagaggccacggagagggctggagatcaatttggaggatgataagatggtgcagaggatgccagcggatgaggttgctccaaagaaactcacgctgcaattggatttggagaagcccagccttggtgacgaaaagtccccatcagaacgacggccacagccggcattgcagcaacagaaacctaagaatgagataaagcatgaaaaatctgcaatgcctgctgttacaccacctatgccgatacctgttggaagttggctggggagttttccaccatttggttacctcggtcctgtaccggcactatcagctgctggtcttcatcatcctatggatgtcaagccagggtcttctgctggattacagcatgctgcattgctacctccagtacggccaaagcgctgtgctacgcattgtttcatcgctcagcagatcaggtacaaccagcaagtgacagcaaagatgcagaacttctggacaccggcgacggcagcagcggcagccgccgccgccagtagatcggcggcgccattctttggtccacgaccattcaacatgggtgtggtgccgccagcggaggctgcctcccttcttgtgaatccaatgcaggggagctaccctgtgagggcccacgcccccctgcaagaagccaaggctccttcaatggctacctctcctttccaggggagtctatcaaaggataaagcagcaatgaacaatgctgctgttgctgagtcaagccaaagaaagcaacctccggctcatgaagcacaacaacccggtcccgtgccgaacatgctgcaaggcccggcattcatctttccattcaaccagcaacaagctgcagttgtggctgctgctgcaaatgctgccagccgagtgggtgatgcaaagccttctgtgggcagtaatacaatgccaccatctgctgctgcccacaattcttcagcaaaccctggcgcagcggccatgaacctgagctttgccaacttgccaccagctgatgctcagctttttgccatcttacagaatggcggctacccgttccaggttgctgctcatgctggaggacctcctgctgcctatcgaggcatggcaccaccaggacctgctgttccgttcttcaatgggcatgtttacccttctcacatgttgcacccatcacagcagcaaggggcgtcaccacaaaatcttcagaagaaccccatgtcaaacatgtccgcttcatctcagaagcatcagccacaacaatctcaagggttactgggatatgcaccaaatgctaatgctgctgcagctgccagtaattcccagagctattccagtggcaaccagcgtccagtgctgctgcctggccttgctcaccgccaggacagtgagaaaactgtgcaagatggtccatcgggtgatgacaagtcatctcaccctcagaaaggaggttatgatcataattatgccgttccagttcatcttccaaattttgcattgatgccccctacttccgctgctggtggtggtggtcagagtgacaagaagttaagtgatcaccacccgcatcagctaccaccggcgagtcgagggcagggtgtgagaattgatcttgcttcctctccctcttttgtggttccttttggttctgtgggtgctcctggatctgccccaggtggccttgacttttcttcattggggccgaaccatcaactattccagagccatcaagaagcaggcaggcatggttatcctcagctcaattttgccacagcgcaatctgttcaagctggtcaacacaagccccagcgtcaggtcagtggagaaacaaaatctgtggctggtgattcttcaacgcataacactgttgacagtgagagaaagaaatcagcagctgcaaagtatccaggtgattcacagcagcattcactttccttctccaggcaagataacaagtcttatgtgcctcctttccttagtggaagcactaatgatagctcatcccgcaccttgagccttattgggtcagaaccttcaaatgccttcagtctaggaggcaaatcagcaaatacatcggccccggcagctacatcagcggcagcaccatccccatccagcattcctcagcagcagcagcagcagcagcagcaacaacatttccttcaacttcataagcagcag</cdnaseq>

Protein Sequence

<aaseq>MIGVPVPRKARSASTKRSSHEWSVPGGGSSGGGGSGSVAGDTSQ IQRPSSRPISPASGSTTGPARKKLKHLGGSGSSGASGQAPKQRPSPASAPSTAPPQPP PPKISKSPSFIQEEIEVAEVLFGLTRQFPCPSKPVESNHKLEVRDAPEAKSGNSSPAP SSSVARPSDSTSVATIAPKRKRPRLVKYDDDVRPASPAKPDLAEPSSRPETLPASRSD AKASVSAATDSGTTTATAGAQHEAMREQEKREDHRSRDSELRPGESDRRDHRPESRAE PTPPAQPSGKPDGESAAVVSEARNGEATAATKIELASDGARQEKFCIDLMAPPPGKSP DRDGASDPDVDKKGLDSEMDMAARGNSEKKDAERPRRGLEINLEDDKMVQRMPADEVA PKKLTLQLDLEKPSLGDEKSPSERRPQPALQQQKPKNEIKHEKSAMPAVTPPMPIPVG SWLGSFPPFGYLGPVPALSAAGLHHPMDVKPGSSAGLQHAALLPPVRPKRCATHCFIA QQIRYNQQVTAKMQNFWTPATAAAAAAAASRSAAPFFGPRPFNMGVVPPAEAASLLVN PMQGSYPVRAHAPLQEAKAPSMATSPFQGSLSKDKAAMNNAAVAESSQRKQPPAHEAQ QPGPVPNMLQGPAFIFPFNQQQAAVVAAAANAASRVGDAKPSVGSNTMPPSAAAHNSS ANPGAAAMNLSFANLPPADAQLFAILQNGGYPFQVAAHAGGPPAAYRGMAPPGPAVPF FNGHVYPSHMLHPSQQQGASPQNLQKNPMSNMSASSQKHQPQQSQGLLGYAPNANAAA AASNSQSYSSGNQRPVLLPGLAHRQDSEKTVQDGPSGDDKSSHPQKGGYDHNYAVPVH LPNFALMPPTSAAGGGGQSDKKLSDHHPHQLPPASRGQGVRIDLASSPSFVVPFGSVG APGSAPGGLDFSSLGPNHQLFQSHQEAGRHGYPQLNFATAQSVQAGQHKPQRQVSGET KSVAGDSSTHNTVDSERKKSAAAKYPGDSQQHSLSFSRQDNKSYVPPFLSGSTNDSSS RTLSLIGSEPSNAFSLGGKSANTSAPAATSAAAPSPSSIPQQQQQQQQQQHFLQLHKQ Q</aaseq>

Gene Sequence

<dnaseqindica>2947..4314#2423..2857#2258..2342#2102..2171#1766..2009#1577..1663#1353..1404#833..1229#411..735#145..311#16..52#aaggccgccgacgaaatgatcggcgtgccggttccgaggaaggctcggtcaggtatgcgcttggaaaccaccggaaattttggcatctccggtgttcttcgttcttctccatatggctaactcgctccccttgattttcttcagcttctacaaagaggagttcgcacgagtggtcggtccccggcggtggaagcagcggcggcggcggcagcggtagcgtcgctggagacacctcacagatccagcggccgtcctcacggccgatctctccagcgtccggctctaccaccggacctgcaaggaagaagctggtaggtgtcacacatctcctcgcctccttggcttgctgatttttctctcggtttttagctgatttttttctgttggtttttcgccgcgtctcttcacagaaacatcttggtggcagtgggagcagcggcgcttcagggcaagcacccaagcagcggccttcgccggcatcagctccgtcgacagcgccaccgcagcctcccccgccgaagatttcgaagtcgccgtctttcattcaggaggagatcgaggtcgccgaagttctcttcggcctcacgaggcagttcccgtgtccttccaagccagtggagagcaaccacaagctggaggtcagggacgccccggaggccaagtccgggaactcctcgccggccccgtcgtcctcggttgcacggccatccgattcgacatccgttgctacaataggtttgagcctctttcacttccctacttgcaacgatttcttctttgccaattttgggtttctgggagcctcatctcatcttttgcctgcttattgcagcgccaaagaggaagcggccacggctcgtcaagtacgacgacgatgtccggccagcgagcccggcgaagccagacttggctgagccgtcctcgaggccagagacgcttccggcatcaagatcggatgcaaaggcgtcggtgtcggccgctaccgacagtggcaccaccaccgccaccgctggtgcgcagcacgaggctatgcgggagcaggagaagagggaggaccataggagtcgagattcggagctccggccaggcgaatcagatcgccgggatcacaggccggagagccgggcagagccgacgccgccggcgcagccctcaggcaagccggatggtgaatcggcggcggtcgtctccgaggctaggaacggcgaggccaccgccgcgacaaagatgtgggtcctcctggatttttatattattcggtgttgcgataaccattattgtttttggattgtgccgatctgattaagtgattagtatattcacaatttgtgtgaacgatatttttttttcagtgagctggcatctgatggagctcggcaagaaaagttttgcattgatctcatggtgggtatatgcttccttgtgtgtgtggttgaattggtcttgcggaatttgttgggcaatgattgaaagcgacaatttttgccgcaattgttgcttggttttttctccccttttcttatctttttttgctccttttctgacttcttttgtttttaattttttttggttccaggctcctcctcctgggaagtctcctgatagagatggtgcttccgaccctgatgtggataagaagggattggattctgagatggacatggtgtgaacttcagtttcaccaattttttttagttcacctgctagagcattggatttttggacactgattgaccattttatttgtgttttggtttgattttaggctgcgagaggaaattccgaaaagaaagacgcagagaggccacggagagggctggagatcaatttggaggatgataagatggtgcagaggatgccagcggatgaggttgctccaaagaaactcacgctgcaattggatttggagaagcccagccttggtgacgaaaagtccccatcagaacgacggccacagccggcattgcagcaacagaaacctaagaatgagataaagcatgaaaaatctggtaagaattttgctatattcgtttgcaaatttggttcttttggttttcgaaatgtgggagttttctcatctggaattcatcctctcttgcagcaatgcctgctgttacaccacctatgccgatacctgttggaagttggctggggagttttccaccatttgggtgagttttcttggctgattgatgtgttacactcttgcccccagaggaatttttgttctaaagcttgctgtttcctgacctcccagttacctcggtcctgtaccggcactatcagctgctggtcttcatcatcctatggatgtcaagccagggtcttctgctggattacaggtttgcttctcatttcagcctagatatggttctctgcgttttgacctccttccaagcactgatttcttttttaattgcagcatgctgcattgctacctccagtacggccaaagcgctgtgctacgcattgtttcatcgctcagcagatcaggtacaaccagcaagtgacagcaaagatgcagaacttctggacaccggcgacggcagcagcggcagccgccgccgccagtagatcggcggcgccattctttggtccacgaccattcaacatgggtgtggtgccgccagcggaggctgcctcccttcttgtgaatccaatgcaggggagctaccctgtgagggcccacgcccccctgcaagaagccaaggctccttcaatggctacctctcctttccaggggagtctatcaaaggataaagcagcaatgaacaatgctgctgttgctgagtcaagccaaagaaagcaacctccggctcatgaagcacaacaacccggtcccgtgccgaacatgctggtatgttcatgtctggtgtgcgatgtgttttcgttcttcggaaaaaaacgtcatttggtttccttatgagagtcccctctttttttcagcaaggcccggcattcatctttccattcaaccagcaacaagctgcagttgtggctgctgctgcaaatgctgccagccgagtgggtgatgcaaagccttctgtgggcagtaatacaatgccaccatctgctgctgcccacaattcttcagcaaaccctggcgcagcggccatgaacctgagctttgccaacttgccaccagctgatgctcagctttttgccatcttacagaatggcggctacccgttccaggttgctgctcatgctggaggacctcctgctgcctatcgaggcatggcaccaccaggacctgctgttccgttcttcaatgggcatgtttacccttctcacatgttgcacccatcacagcagcaaggggcgtcaccacaaaatcttcagaagaaccccatgtcaaacatgtccgcttcatctcagaagcatcagccacaacaatctcaagggttactgggatatgcaccaaatgctaatgctgctgcagctgccagtaattcccagagctattccagtggcaaccagcgtccagtgctgctgcctggccttgctcaccgccaggacagtgagaaaactgtgcaagatggtccatcgggtgatgacaagtcatctcaccctcagaaaggaggttatgatcataattatgccgttccagttcatcttccaaattttgcattgatgccccctacttccgctgctggtggtggtggtcagagtgacaagaagttaagtgatcaccacccgcatcagctaccaccggcgagtcgagggcagggtgtgagaattgatcttgcttcctctccctcttttgtggttccttttggttctgtgggtgctcctggatctgccccaggtggccttgacttttcttcattggggccgaaccatcaactattccagagccatcaagaagcaggcaggcatggttatcctcagctcaattttgccacagcgcaatctgttcaagctggtcaacacaagccccagcgtcaggtcagtggagaaacaaaatctgtggctggtgattcttcaacgcataacactgttgacagtgagagaaagaaatcagcagctgcaaagtatccaggtgattcacagcagcattcactttccttctccaggcaagataacaagtcttatgtgcctcctttccttagtggaagcactaatgatagctcatcccgcaccttgagccttattgggtcagaaccttcaaatgccttcagtctaggaggcaaatcagcaaatacatcggccccggcagctacatcagcggcagcaccatccccatccagcattcctcagcagcagcagcagcagcagcagcaacaacatttccttcaacttcataagcagcag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0571100, RefSeq:Os07g0571100