Os07g0574800

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Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0574800| Description = Tubulin alpha-1 chain| Version = NM_001066610.1 GI:115472952 GeneID:4343694| Length = 3392 bp| Definition = Oryza s...")
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Gene Name

Os07g0574800

Description

Tubulin alpha-1 chain

Version

NM_001066610.1 GI:115472952 GeneID:4343694

Length

3392 bp

Definition

Oryza sativa Japonica Group Os07g0574800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23903982..23907373

Sequence Coding Region

23904081..23904193,23905104..23905318,23905400..23905599,23906157..23906665,23906785..23907100

Expression

GEO Profiles:Os07g0574800

Genome Context

<gbrowseImage1> name=NC_008400:23903982..23907373 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:23903982..23907373 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagagatcatcagcatccacatcggccaggccgggatccaggtcggcaacgcgtgctgggagctctactgcctcgagcacggcatcgagcccgatggcaccatgcccagtgatacaacggttggcgtcgcacacgatgcgttcaacactttcttcagcgagacgggcgctggcaagcatgtgcccagggccatctttgtcgacctggagcccactgtcatcgacgaggtgcgcactgggtcgtaccgtcagctcttccaccctgagcagctcatctctgggaaggaggatgccgctaacaactttgcccgtggccattacactgttggaaaggagatcgtagatctatgcctggaccgtgtgcgcaagttggcagacaactgcactgggctgcagggattcttggtgttcaatgctgttggtggtggaactggatcaggacttggttctcttctgttggagcgtctctctgttgattatggaaagaagtccaagcttggcttcacaatttacccttccccccaggtctcaacagctgttgtagaaccatacaacagtgtcctctccacccactccttgcttgagcacactgatgtggcagttctcctagacaatgaggctatctatgacatatgccggagatcccttgacatcgagaggccaacctacaccaacttgaacaggctcatctcacagatcatatcttcactcaccacctctctgaggtttgatggcgctatcaatgtggatgtcactgagttccagaccaaccttgtcccataccctcgcatccatttcatgctttcatcctatgcccctgttatctctgctgagaaggcttaccatgagcagctttctgtgcctgaaatcaccaatgctgtttttgagccctcaagcatgatggctaagtgtgaccctaggcacgggaaatacatggcttgctgcttgatgtaccgtggtgatgttgttcccaaggacgtcaatgccgcagttgcaaccatcaagacgaagagaactgtccagtttgttgactggtgccctactggattcaagtgtggcatcaactaccagccaccctctgttgtccctggtggtgacctggctaaggttcagcgtgcagtgtgcatgatcagcaacaacactgctgttgctgaggttttctcgcgcatcgaccacaagttcgacttgatgtatgctaagcgtgcgtttgtgcactggtacgttggtgagggaatggaagaaggtgaattctcagaagcccgtgaggacttggctgcccttgagaaggactatgaggaagtcggcgccgagggtgcagacgacgagaacgacgatggagaagactattag</cdnaseq>

Protein Sequence

<aaseq>MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGV AHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANN FARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD YGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD IERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVI SAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVAT IKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRID HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGADDENDDGEDY </aaseq>

Gene Sequence

<dnaseqindica>100..212#1123..1337#1419..1618#2176..2684#2804..3119#gaggccgcttctctagtctagaccaaaggaaggaaaccaaccgagaggcgaggcgaggagaggagaggagaggagaggaggaggaggagggaggagaagatgagagagatcatcagcatccacatcggccaggccgggatccaggtcggcaacgcgtgctgggagctctactgcctcgagcacggcatcgagcccgatggcaccatgcccaggtgacgatgaatcccccctccccctcccccaacctcttcttctttgatccgtagatgcattcctgttcctgatctcgggaggcggccccgcgttccccggcttcgtttgatctggtagccccggttgagttgcgtccgaaatgccagatttgtttcgccgtctgtttttttttgtgtgtatgtgttttttttggggggaaattgtttgcttcggcggagcgaacgatgggtgcagccttccgcttgtacttctcgtttggactctgcggattggttttggccgaaccttcttggtggttggtgcatctccttgccggttggtgaggggattgcaagggacaggacgaacaccgtgcgtctcggaggaagggaattttagccgtagtttttacgctcttttttttaccgtttggaattatatggaggaatgcgtttgattttctccggagtagactgtagatttgcgtgctggttgcatgtttacaagttggcaattgggagtttccagagttctttacggttctagatctgcgaatttacttgtggggtgatgcttagtaaataatgtcacatggaagctctgagtgtcagactgagcacgtagatcgtcctagattggagagtttaatctgggttactattaaaagcggcatcctccactatcgaggaggatttgttttgttggttttactttgcttggtgtaagaattgagtagattattgaatcataaacaattgtgctcatgctgccttgcctgagaattagattccattatattatcatggatgtagcccgctttttgtaggcagctctggtagactgtaatttatttggtactgcataggctaatgattagaattatcagtcagttttgatttctaaacattgtgctgtttgctcttggtgcagtgatacaacggttggcgtcgcacacgatgcgttcaacactttcttcagcgagacgggcgctggcaagcatgtgcccagggccatctttgtcgacctggagcccactgtcatcgacgaggtgcgcactgggtcgtaccgtcagctcttccaccctgagcagctcatctctgggaaggaggatgccgctaacaactttgcccgtggccattacactggtaattcagcttagagttcatacaagtgttattctattgcaactgtgcatgtgtcttgttctcattgtttgtggaatgcagttggaaaggagatcgtagatctatgcctggaccgtgtgcgcaagttggcagacaactgcactgggctgcagggattcttggtgttcaatgctgttggtggtggaactggatcaggacttggttctcttctgttggagcgtctctctgttgattatggaaagaagtccaagcttggcttcacaatttacccttccccccaggtataacttaatctgatccatgttagttgtactctgagggaaaaaattaaataaaatgctctataccagaaacttgaaattttcaggctggtgtagaattaatttatttggacacctgcttagatatgggccatgttatcagccacttctttttcttgttgttgtgagttgtgcatggcaatatattgattattggatctgccaaccattctctaattagtatgtggactaataaactgctggcctggctgcctggctggtggggatctacctatatggctatacaatatccctatcttatgtagactctttagtgaacttttatggactattagtcttcttcgcgaagtctgtaataccatgcattgtatgagccagcattatcctagtgtactgtaccaactttccatgtgatgtgggcctttcagcttgttcatgtgatgagtgggtttgctttgtcttagctgttgtggggacaatttgggtagagttgttgtacaattatttaaagttcatcatatcattatcttctcgtcttatgccactctggtttgcaggtctcaacagctgttgtagaaccatacaacagtgtcctctccacccactccttgcttgagcacactgatgtggcagttctcctagacaatgaggctatctatgacatatgccggagatcccttgacatcgagaggccaacctacaccaacttgaacaggctcatctcacagatcatatcttcactcaccacctctctgaggtttgatggcgctatcaatgtggatgtcactgagttccagaccaaccttgtcccataccctcgcatccatttcatgctttcatcctatgcccctgttatctctgctgagaaggcttaccatgagcagctttctgtgcctgaaatcaccaatgctgtttttgagccctcaagcatgatggctaagtgtgaccctaggcacgggaaatacatggcttgctgcttgatgtaccgtggtgatgttgttcccaaggacgtcaatgccgcagttgcaaccatcaagacgaagagaactgtccagtttgttgactggtaagctgtcttcatcactattttagttgcgcttattttaatcacaggcaacctatccacttgtttatcaacacctgattggctaaccaactgtttattgcttctcttcctccacaaaggtgccctactggattcaagtgtggcatcaactaccagccaccctctgttgtccctggtggtgacctggctaaggttcagcgtgcagtgtgcatgatcagcaacaacactgctgttgctgaggttttctcgcgcatcgaccacaagttcgacttgatgtatgctaagcgtgcgtttgtgcactggtacgttggtgagggaatggaagaaggtgaattctcagaagcccgtgaggacttggctgcccttgagaaggactatgaggaagtcggcgccgagggtgcagacgacgagaacgacgatggagaagactattagtagctggttaataagtagttctctggttaatgattggtttgtcagtatactccggttccgttgcattgcatattcctgttatgtgtgtttactttttgtactgtgctaaactgttgttagcccctcgttggccatgattgttcatatcttcccattttgctgtgcattgcttgctactcccccccaagcttggtacatatgccattctgagctgaattgcaaaactgtatgctctctatgcatggtccaatggagctatggatgctttcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0574800, RefSeq:Os07g0574800