Os07g0577300

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Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0577300| Description = Glycoside hydrolase, family 17 protein| Version = NM_001066622.2 GI:297607510 GeneID:4343706| Length = 4077 bp| Def...")
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Gene Name

Os07g0577300

Description

Glycoside hydrolase, family 17 protein

Version

NM_001066622.2 GI:297607510 GeneID:4343706

Length

4077 bp

Definition

Oryza sativa Japonica Group Os07g0577300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24004669..24008745

Sequence Coding Region

24005805..24005886,24006144..24007400,24008303..24008330,24008419..24008548

Expression

GEO Profiles:Os07g0577300

Genome Context

<gbrowseImage1> name=NC_008400:24004669..24008745 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24004669..24008745 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctagagcaccgaaatatgtggccagcgagcctaaaaggcgtggtgattctgttaatgctcatggttttcaatgtttcaggagcatttgttggtatcaatgttggcactgatatttcgaacccaccatcagcatcagacacagtgtctatcctgaaagaaaagaagattcaacatgttcgtctgcttgattcagaccatcagatgctatctgcccttgcaaatactggaatagaagtggtggttggggttccaaatgatcagctacttcgagtggggcaatctcgttctacagctgctgattggattaacaagaatgttgctgcatacattccagcgactaacataacgcatattgctgtagggaatgaggttcttactacagaaccaaatgcagctcttgttcttgtacctgcattgcaattcctacagtcagcgcttttggctgcaaatctcaatacccaggtgaaaatttcaagtcctcattcaacagacatgatctctaagccatttcctccatctactgctacattcaattcgacatggagctcaataatgcttcagtatcttcaatttctgaacaacacagcatctcccttcatgctgaacgcccaaccttattatgactatgtcaaagggcaaggcgtattccccttagaatatgcgctgtttcgatcactcaaccctgatagccaaatttcagatcccaacacaaatttgttctataccaatatgtttgatgctatggttgatgctacatacaactcaatgcaagcaatgaatttcactgggatccctgttatggtcacagcttctgggtggccatcgcatggtgggcaaaatgagaaggctgctaatgtggataatgctttggcctacaatacaaacctcatacgccatgtattaaataattctggtactcctggccagccaaacaatcaagtaagcacattcatatttgagttgttcaatgaggatcttcgggctggacctgtctcagagaaaaattggggcatcatgttccccaatgcaactactgtgtacagccttacatttgaagacatggccacaactaatacagattcaccagttttgcgagggacattctgtgtagcaaattctagtgctcctcatagcgcattgaagcaaagcttggattgggcctgtggccctggctctgcaaactgcagtgcaattcaacctgggcaaccatgctataaatcagatgacattgtcgctgttgcttcttatgctttcaatgattattaccataggacacgagcaagtggcggaacatgcaacttcaatagcacggcaatggtgacatctactgatccaagccatggttcatgcatttttgcaggaagcactggctccaatggcagcaacggtggtgcggcgtctgggcccgtaagcccagacaattttgctacacaaattcactcgtgctggttgactcacctaattacattgctgtctatcatggtgttcatgtaa</cdnaseq>

Protein Sequence

<aaseq>MLEHRNMWPASLKGVVILLMLMVFNVSGAFVGINVGTDISNPPS ASDTVSILKEKKIQHVRLLDSDHQMLSALANTGIEVVVGVPNDQLLRVGQSRSTAADW INKNVAAYIPATNITHIAVGNEVLTTEPNAALVLVPALQFLQSALLAANLNTQVKISS PHSTDMISKPFPPSTATFNSTWSSIMLQYLQFLNNTASPFMLNAQPYYDYVKGQGVFP LEYALFRSLNPDSQISDPNTNLFYTNMFDAMVDATYNSMQAMNFTGIPVMVTASGWPS HGGQNEKAANVDNALAYNTNLIRHVLNNSGTPGQPNNQVSTFIFELFNEDLRAGPVSE KNWGIMFPNATTVYSLTFEDMATTNTDSPVLRGTFCVANSSAPHSALKQSLDWACGPG SANCSAIQPGQPCYKSDDIVAVASYAFNDYYHRTRASGGTCNFNSTAMVTSTDPSHGS CIFAGSTGSNGSNGGAASGPVSPDNFATQIHSCWLTHLITLLSIMVFM</aaseq>

Gene Sequence

<dnaseqindica>1137..1218#1476..2732#3635..3662#3751..3880#gctggctccagccagcggtccagcctccaatctgaagttcgtgcttcgttcttggctgtgtgtatctggaaaggggaagtggaagtggaagaaaggtctcttctccggggacaagatcaggtggcttaattattttcttctcttctcttgttggtttgtttcatttttctttcatgtactgttgatacgattgcgatgttcccgtttgttgctttgtttctggaggcttgtgatcttttgtgctcgtgacctttcaccaaccgaggtttcttggaaaggaatggaattttaaccgtgaggggtgatgggagtgttcttcaaagcttgcttgtttatgactccaaaacaaattttaatttcacgtttcactcagaaacaaagcccatcaccatgctcttgtcctcctgtttcacgtttctcattgctttatattcagtgaagttttaactgtcggggaacggagttcttctgatttcctcatgattaggcagcgttagtattggggatttgtcctgatgttttgagaggtaactgcttgatttgcttgttcatctttgtgttgatgtgctttcatgcgtagcccctttgggttttcttgcttgaattcctcttcattcttcttacccgttcggccgttcacctcccaggcatttcttcagacagctctccgccacctcgggttatctgatagatttctctcagattccctgaattgcttggttcttggatgagcgcctggttcctgtttcttggatgtttgcagatttgcagagtattcggcaagctctttgaactagtagtatctgaatacttttgaactgcatttatgtcccaaactgttattttgtgatgatgatttgggaagaaccagaaaggtcgatgctttaatatcatatttggctgtattctacaaatgtggatgcattctttatttctcatcattttttttgcggggaattgtatttctcatcattaaagttttctcagctcaaatttattacctcctaaagatagaagttaagtgaagtttgtgctatattgtttgaagggaataatttcttcaatgttgatatttcagcttcggttaagtgcttctgagaaagtgagaaaagtgtcattggataataagaaatcagatgctagagcaccgaaatatgtggccagcgagcctaaaaggcgtggtgattctgttaatgctcatggttttcaatgtttcaggtaacagcacatttgtaacttaacttctatgaatatggctttattgtaacacggtgctttcaattagggttgatgctttattgtatttattcaatttgcgctttgatttgccaagttgtgcgagagatagttttctcgaatacatgcgaagagttaagctagtacaccaaacaaattactgctttgaactgcaaaatggttgctttatgactgttgccatatatatattcatggaacaattttattcacttccacaggagcatttgttggtatcaatgttggcactgatatttcgaacccaccatcagcatcagacacagtgtctatcctgaaagaaaagaagattcaacatgttcgtctgcttgattcagaccatcagatgctatctgcccttgcaaatactggaatagaagtggtggttggggttccaaatgatcagctacttcgagtggggcaatctcgttctacagctgctgattggattaacaagaatgttgctgcatacattccagcgactaacataacgcatattgctgtagggaatgaggttcttactacagaaccaaatgcagctcttgttcttgtacctgcattgcaattcctacagtcagcgcttttggctgcaaatctcaatacccaggtgaaaatttcaagtcctcattcaacagacatgatctctaagccatttcctccatctactgctacattcaattcgacatggagctcaataatgcttcagtatcttcaatttctgaacaacacagcatctcccttcatgctgaacgcccaaccttattatgactatgtcaaagggcaaggcgtattccccttagaatatgcgctgtttcgatcactcaaccctgatagccaaatttcagatcccaacacaaatttgttctataccaatatgtttgatgctatggttgatgctacatacaactcaatgcaagcaatgaatttcactgggatccctgttatggtcacagcttctgggtggccatcgcatggtgggcaaaatgagaaggctgctaatgtggataatgctttggcctacaatacaaacctcatacgccatgtattaaataattctggtactcctggccagccaaacaatcaagtaagcacattcatatttgagttgttcaatgaggatcttcgggctggacctgtctcagagaaaaattggggcatcatgttccccaatgcaactactgtgtacagccttacatttgaagacatggccacaactaatacagattcaccagttttgcgagggacattctgtgtagcaaattctagtgctcctcatagcgcattgaagcaaagcttggattgggcctgtggccctggctctgcaaactgcagtgcaattcaacctgggcaaccatgctataaatcagatgacattgtcgctgttgcttcttatgctttcaatgattattaccataggacacgagcaagtggcggaacatgcaacttcaatagcacggcaatggtgacatctactgatccaagtaagccggtttctttctctttgactaccaatttccctgcaattattaggtactaacacttttgcacaattggtaattacctggtttagttttctggaagcatggttagcagcagtcagcactaaaaggacatttactttctgaacattttagtaatcttcatttgctcctagtactgcaggaaaaaaaaactaagtttatatattaaaacaactagatgcatgttttcaccaaactaatagccaccagccaccatagcagtttagatcatgttggttagattattagttaaccagcccaatattttactggttacatggaaacttgcttaagatctgtgaaacttataggggcttatcctgtcgcatgctataatagtatccacatgactacatgatttctacggtgtcttcctgttcctggtatgcagcatggcagctattacaaactgttctgatccaagcgaaactaaatgtaacaagtgcatgcaaaagaactgattggctcattcattgggactttgtttgcctattcttaatatgacttagatgccattgaacgccagtaaacaccttggagctgcaaacaaggttataattgaacatgtttgagtttgtgtatgtctgacatggacctctgattacataggaatggtaagcgagaaaatttgaagaaaccttagactttagatatctgatcatgctaatataaaatgtgtttaccactagttaaatgcatgatcacatcctgaagtttcatgcattttcttatagaaggcatcctgaagtttttttagtgtgttcaaagagatcaagaatatttactgttagattggaccgggtgattacttattttccctgtttgatgagcctaatacaatttccctggatcaaaatatgcaggccatggttcatgcatttttgcaggaaggtgagtcctttctcgatatttttgtgctaacggttctacattttttttttggctctacgtcctgatgcagtgttggttcttcttgcagcactggctccaatggcagcaacggtggtgcggcgtctgggcccgtaagcccagacaattttgctacacaaattcactcgtgctggttgactcacctaattacattgctgtctatcatggtgttcatgtaaaaccctgtaaaaaaatgatgcgttttggatgagatgcccgaaatttattgtggatcttgtcagtaggagtgtaggaggccatatttgtcttagatgtattgaggttagatggcatgtgtttctcaaaattcgttgacctagagaaaggagtcaaatacatcaattttgaatgccaggctgggagtattgaattgtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0577300, RefSeq:Os07g0577300