Os07g0580900

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Revision as of 08:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0580900| Description = Similar to GGDP synthase| Version = NM_001066637.1 GI:115473006 GeneID:4343721| Length = 2435 bp| Definition = Oryz...")
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Gene Name

Os07g0580900

Description

Similar to GGDP synthase

Version

NM_001066637.1 GI:115473006 GeneID:4343721

Length

2435 bp

Definition

Oryza sativa Japonica Group Os07g0580900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24167010..24169444

Sequence Coding Region

24167867..24168289,24168596..24169273

Expression

GEO Profiles:Os07g0580900

Genome Context

<gbrowseImage1> name=NC_008400:24167010..24169444 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24167010..24169444 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgccttccccccgctcgccgcctcccgcgtccgcatctcccctctcatccccgccgccgcgatggctgggacagcaggggcggcggcggcgtcgtacgcgcagcaccggcggaggttctgcgccatcgtggcgaccgcggcggcgtcaccggtgccggccgcggcggcggcggcggcgacggggtttgattttaacgcgtatatgggtgagaaggctgcggcggtgaaccgggcgctggacgcgtcgatcccggcggacgagccgcccgcggcgctccacgaggcgatgcggtacgcgctgctggcgggcgggaagcgggtgcggcccgcgctgtgcctggcggcgtgcgcggtggtcggggggcgggaggcctgggcgatgcccgccgccgccgccgtcgagatggtgcacaccatgtcgctcgtccacgacgacctcccctgcatggacgacgacgacctccgccgcgggaagcccacctgccacgtcgtctacggggagcccatcgccgtgctcaccggcgacgcgctgctctccctctccttccaccacatggccaggttcgactcctaccctccggacatcgacgctgacaagcaccccgcccgcgtcgtccgcgccattggcgagctcgcgcgctgcataggctccgagggcctagtcgccggccaggttgttgatcttgagatgactggatcgaccgaaactgtacctcttgaacgtcttgagtacatccatctccacaaaactgctgcattgcttgaggcatcagtggttattggggcaatcttgggaggtggctctgatgagcagattgaaagtttgcgcatgtatgcgagatcgataggattgttgttccaggttgttgatgatatacttgatgtgaccaagtcttctgaggagctcggcaagacagcagggaaggacttggcgagtgacaagacgacatacccgaaattacttgggctggagaaatcacgggagtttgcagaaaagttgctttctgatgcaagggaacaactttcaggatttgatcaagagaccgcagcaccacttctgcacctggccaattatattgcctatcggcagaactga</cdnaseq>

Protein Sequence

<aaseq>MAAFPPLAASRVRISPLIPAAAMAGTAGAAAASYAQHRRRFCAI VATAAASPVPAAAAAAATGFDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYAL LAGGKRVRPALCLAACAVVGGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGK PTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIG SEGLVAGQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIES LRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEK LLSDAREQLSGFDQETAAPLLHLANYIAYRQN</aaseq>

Gene Sequence

<dnaseqindica>1156..1578#172..849#gtggaacggagccaccgcccaactcgcccccaaagttgcccatctagataagaagaagcgtcgcaactcacggtcgcagtgccacgccccacttcatatcctttccctcccccaactgaacgaaaaaaacaacagagaaaaactcctccctcctcctccccctctgaagccatggctgccttccccccgctcgccgcctcccgcgtccgcatctcccctctcatccccgccgccgcgatggctgggacagcaggggcggcggcggcgtcgtacgcgcagcaccggcggaggttctgcgccatcgtggcgaccgcggcggcgtcaccggtgccggccgcggcggcggcggcggcgacggggtttgattttaacgcgtatatgggtgagaaggctgcggcggtgaaccgggcgctggacgcgtcgatcccggcggacgagccgcccgcggcgctccacgaggcgatgcggtacgcgctgctggcgggcgggaagcgggtgcggcccgcgctgtgcctggcggcgtgcgcggtggtcggggggcgggaggcctgggcgatgcccgccgccgccgccgtcgagatggtgcacaccatgtcgctcgtccacgacgacctcccctgcatggacgacgacgacctccgccgcgggaagcccacctgccacgtcgtctacggggagcccatcgccgtgctcaccggcgacgcgctgctctccctctccttccaccacatggccaggttcgactcctaccctccggacatcgacgctgacaagcaccccgcccgcgtcgtccgcgccattggcgagctcgcgcgctgcataggctccgagggcctagtcgccggccaggtcatcaactcgtcattttctattcgattccttattcgagctaattaagaaaatacaaattaagcaatgcactaattatgtggatcatactctttcctaattgctatgttttgtattgctatctgcatacgttttaattagatgttgttaagcaatgcactaattatgtgaatcatactccttcctaattgcgatgttttgcattattatctgcatcgttttgactagatgttgtaaatactcttaaaatagaatgtgacttcgagttgtgtcgttgctgaaaattgtttgttaaattttggataggttgttgatcttgagatgactggatcgaccgaaactgtacctcttgaacgtcttgagtacatccatctccacaaaactgctgcattgcttgaggcatcagtggttattggggcaatcttgggaggtggctctgatgagcagattgaaagtttgcgcatgtatgcgagatcgataggattgttgttccaggttgttgatgatatacttgatgtgaccaagtcttctgaggagctcggcaagacagcagggaaggacttggcgagtgacaagacgacatacccgaaattacttgggctggagaaatcacgggagtttgcagaaaagttgctttctgatgcaagggaacaactttcaggatttgatcaagagaccgcagcaccacttctgcacctggccaattatattgcctatcggcagaactgaggtgatgggtactccattgattattgttgatttgtaactttgtaagctcattaagattcagatttgaggaatatctgaattatcttgtgatacgtgctagttgtagtttcttatcttgagaagaatatctggttgacaaatgtcaatttcctagttagtcagtcaaaacggaataatgaaaatcagcctctctgccctataccccaattgcttgattcttgacaattgaacacatcatatcataaaggaagaaaatattttatcttcattgttttgattgattatcatagttcatgttcatacctgttttagtgtttatcctacgcaattgatttcgttttatgtgattgtatcaggttcgttttacaatgagtgtcaatgtaagctttgattcagggatgagcttgtcttggaaattgttctgttgaacatgtgtttcagtgatgttcttctgtttacagcaattgggatcaatgtttctctaacagctatatatatgtatattcttggttccaagcatgcagaaaacttcaatcagagaaagtgtttagttacagtgccgtagtaaataaatcggttataattgattcctgtctataggtgtgcattcagtcttttggtcaattcgctttgtagcaaaattcagttagtcaaaactcaggaatgaattgttattgggaaaaggcaagaccgaaattcggttaatcctgtctattgctcaaaaacctatacaagcctttcatagtgaatgtagcccctgcataaggtttcctgtacaggtacagtaggaccttgactaaatgtttttcattggaataatggaatggttataagctgcacctttcttgttcttttct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0580900, RefSeq:Os07g0580900