Os07g0584000

From RiceWiki
Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0584000| Description = Similar to Yippee-like protein CG15309| Version = NM_001066652.1 GI:115473036 GeneID:4343737| Length = 3309 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0584000

Description

Similar to Yippee-like protein CG15309

Version

NM_001066652.1 GI:115473036 GeneID:4343737

Length

3309 bp

Definition

Oryza sativa Japonica Group Os07g0584000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24333217..24336525

Sequence Coding Region

24333552..24333694,24334817..24334925,24336292..24336372

Expression

GEO Profiles:Os07g0584000

Genome Context

<gbrowseImage1> name=NC_008400:24333217..24336525 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24333217..24336525 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtttgctgttcgtggagtcgctcccggggccgaaggtgttcaagtgcaagttctgcggggtggactcggcgtcgccggacgccatcgtgtccaaggagttccgcggccgccatggccgggcctatctcttcgacagcgtggtgaacgtgagccttggtcccagggaggatcgccttctcatgactggattgcacacagtgaatgatatctattgtagctgctgccaacgactccttggttggagatacgagaaagcttatagtgaggaccagaagtacaaagaaggcaagtatatattagagaagcacatgatgctgaaagaaggatag</cdnaseq>

Protein Sequence

<aaseq>MGLLFVESLPGPKVFKCKFCGVDSASPDAIVSKEFRGRHGRAYL FDSVVNVSLGPREDRLLMTGLHTVNDIYCSCCQRLLGWRYEKAYSEDQKYKEGKYILE KHMMLKEG</aaseq>

Gene Sequence

<dnaseqindica>336..478#1601..1709#3076..3156#gaaaaaaacagcccgaaaacagaagcaatcgcgacagagaagaagagggccattcccttcgtcctcctcgtcgcctccgctttcccaatccaccatctccccccacctaaatccatcgaatcatccgcccccgaattccgccgccgacgcggtcgatccctccccggccggcgcatggggatcgggcccaatcgccgcctctcccgcccctcatttggggttcccgggatttgacggctttttgcttgcttgagcgcttgcttgctgattcgatcgggtgggaagatttccgtgcctgcctccggtggtggttcgatcgggcttgggggggattgatgggtttgctgttcgtggagtcgctcccggggccgaaggtgttcaagtgcaagttctgcggggtggactcggcgtcgccggacgccatcgtgtccaaggagttccgcggccgccatggccgggcctatctcttcgacagcgtgtaagctgggctatccatccactatttccatttccccctctcttttgattattgcgtttctatgcatgacagtgacgcgatcgtggcaatgtcgctgtcctggaaaggattagcgtgtccatggacggggaattgtggaattgtcttgtaacagtgctgtttaatgatggatttctcgcgtattgttgttttgggatgggagggaaaacggcggtatcttatattggtgcaattaagctagattgcaagcgttcggaagtagattcatgatgtggttgtgttggatttgatcagtactgcgtggctagggcataagaggctaataagagctatgcaaattatgttccacatgataaattgtcttgttcttaatttttttggtctgtcaatctagacacagatggaactgataggaaatgccgaaatgttgatggctagtgttaagctacagagctatagtttggagattaattagccacaatctcttgttagatattacatgatggaaaacaacatcatgcttggtaaagaatgaagatgaacagagcaaggtgtgagttgagaacttaattcattgtagctatgtcaatctgatatgttgcaaaggtggctcttatcttaaacctagtaggacaagggttcatgtactaatcctaataggattttggttcctgcttctatttggactatgtatgccacaatacccaatccagtccagtattgctgctcacaaaatagggtatcagagtataacatgctattatatagtttttcttagtctatttttcatatctttgtaactgacctactactggatgttaaaggcatgcgaaggttatgttttgtgaaatcagttgaacatgtaaaccatatgttgttttctgaaataggcaagcaatataccatgtacttcgtttgtttaaatgaagtatccttgtctggcgtttatttttgtccgatccaacaaacaaacatgataattagggcaatgttgttaatgttgcatcaatttacatcacagtattagttaaggcataattggtcattcaaattgataatttgaacaaccactctcaaccaattcttgtttacatgttgatccggagtgaacatgacatccagggtgaacgtgagccttggtcccagggaggatcgccttctcatgactggattgcacacagtgaatgatatctattgtagctgctgccaacgactccttggttggagatacgtaagttgccagtttccatgttgtttagtgagaattcatttgaacactacaaatgtaggacggtctatgccttcatgatggtcaacctgttaaatattcgatactttatctatatctggataagttaatgtcctaacagaagactgtgagagatttgactaacttttcttattgagcatgatcatatagcattcatgtcttttgaaacaataggagggtagagtttgctacataatgtatgggaatctccaaggcataacctctgcatttctggggagcacataactaagaattatgttggctatagattgcatttttgctaagagccaatgcattaccttatgattcatgggcatcgactggttgtcagactttctatttcctggatctctttcgtgttatcatttctttgatgtgtaaaactctattaatactatatgccttaattgtgaggcaaaatgggcagcaggatgtggctatgctttctgacacaagacaaacatgatctggtttttttgtttcctcattttcgaaatttgatgttgtcagttgagaagatgcatgatgaatccatgctccatggtgcattaccggtagaagtctaacaagctatcactccctctacaaactcatctatgctcgtaggcttttctgttagatcatgtttcatgagcttccatgcggcactttatcgtttgaatgcattcttctgcaacactcaaagtaggtagtaatgcttagtgttcaagtcgtagcttaaacctgggactgtccagatcttaataatatataccgagactagtcgatcactaccctatagttctgagctttataaattaagtacacctcattttctaccactgtgtagtttatagttattttttcctggtgaatttttttttggggaaaaaacaatatgttgcctatgttatgtggttgggaacatctagtccatagtgggtcttttcagctaaggagcatatgatcaatttgttcctccatttctcccttagttccatggtcaggctgccctttccacaggaatcttgcaaattgttaacttaatatgagatttttattgtttggttgcatttgtagtgatgatttcctccaggagcattggctggatgttccttcatgcatgactaattatacctctaaacacttgctactgccagatggactataagaccaatcctgggtcatacacacttgggcatttgatccaaatgtcagcaagtatgagtccataagcgtgaacgaacgaatatgctctttaatgttcatgccatttctctcatgaatgttggttattttttctggatcagtcatcatcatgtaactgtgctcattgaacaatatgcaggagaaagcttatagtgaggaccagaagtacaaagaaggcaagtatatattagagaagcacatgatgctgaaagaaggatagtgattggaaaaccgctgaactattaagtctgcaaatgcaggcatatgaaaccatgtaaaatatcgctgaatattgggtttcaattctccccaaaattgattatctggcgaggaccatcgtcattaaattgcatttatgaaatataatgtcatg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0584000, RefSeq:Os07g0584000