Os07g0588300

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0588300| Description = Protein of unknown function DUF936, plant family protein| Version = NM_001066676.2 GI:297607543 GeneID:4343761| Leng...")
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Gene Name

Os07g0588300

Description

Protein of unknown function DUF936, plant family protein

Version

NM_001066676.2 GI:297607543 GeneID:4343761

Length

3707 bp

Definition

Oryza sativa Japonica Group Os07g0588300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24613562..24617268

Sequence Coding Region

24613562..24614386,24614487..24614735,24614841..24614932,24615150..24615822,24617185..24617268

Expression

GEO Profiles:Os07g0588300

Genome Context

<gbrowseImage1> name=NC_008400:24613562..24617268 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24613562..24617268 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccggtgtcgtcgtcgacgtcgaggccggcgtcgctgccgtcgtcgccgcacaggccggcgctccggccgggcagcctgcagcggctgctccggccgccggacccctccgacgacgacggcgccgcccccacggcgccccgctcctcccgcggcggcggccgcgtcctgctccaggtcaccaacatcacccccgcgctctccggcgccaaccctttctccggccaccacggcttctacctccgcctctccgactccgcgcgctcctgctacgtctccctccacgccgaccacgacgacctcatcctcaccaacggcctccacatcggccaggtcatcgaggtcgagcacctggtgccgtccgtcccggcgcccgtgctccgccatttccgcgtcctccccggccgctacccctgcatccagcaggaacccgccgacgacgccgccgccggcggcgccgcggcggagatcaaggaggtcgtgtccgagcgcccgcgccgctcgtcgccgacgccccccatcccgggcgagaggagggcgcggcaggcgggcggcggcggctccccctcttcgatcagctaccgccacaggtcacggtcgatatcgaacttgtcggaggcgggcgcggcggcgaggaggagcggcgccgccgtcctggggaagctgaggaaggtcagcgtcacgtccatcgacggcaccagcaccgacgacgacgacgaggagtccgacgtgtcgtcgctgtcctcggcgaggaggaactgggatttcaccggaggcgtcaaggacaggaggcccgtcgctccacggagacgcgggaacagcgtttctccaagtaaatccggcccaaactctactatcacgcagaatgatgatccgatggagtcggtgaggaggaaagccgagaaggcattcaacgtgctctccaagagggcgtctgctaagatgaccagagaaagctctaattgcacggtggcgacgccgcagagcgctgcggcgtcgagcagcatcaagtggtgtgagagcaatgtgatgtggagcacactttcatcaagcttgctgaagcatggaaaggaagcagtgaagcagagagatatggcactgcaggctgtgcttgatggattgctagaggcatctaccactgagaaattgataaaatgcctgagtacttactctgaactacaatctgacaaggaagaaaacccaaaggagctcatcgacaggttcttgaaattctctcaggaactggatcatgctatcttcatcgcccaatcacagaccaaaattaggcatgtaaaagcatgtggttccaattcaacatcctcagcttcaaccaaagctgctttgaaggctgcattggataggaagcagtctgccatcttatggatcagagaagccattgaagcagacctctcacctttttctagccatacaagacccactgaatcaccaaagctatcactggcagagtcaaagcctatgaccccattgttctgttgttccaagccaaagtgcaactgcagcaaaaggtcctcaaggaaagcatctgatggttcctctcaaggaagtaacatgagtgctgccatggacctggctgtagcactgagatcagagtgcaactgttggttcctcaagtacatcgacaagttcttggacgatatcgaaagcgagaccatgtatgcaccatgtgattcccaagttgcaggccttctgcagcagcttaaaagggtggatgactggctcaaccgtgtcgcgctacatgagaggatgctttcggttgaccgaacaaacaaggatatcatgttttctgaagaagaggagagcgatgcgtgcgagaggagaagagatgttcagatcaatattgctgatgttgactccattgtaagcgattggtgcatacatccacgtgtcatcagagcttag</cdnaseq>

Protein Sequence

<aaseq>MPPVSSSTSRPASLPSSPHRPALRPGSLQRLLRPPDPSDDDGAA PTAPRSSRGGGRVLLQVTNITPALSGANPFSGHHGFYLRLSDSARSCYVSLHADHDDL ILTNGLHIGQVIEVEHLVPSVPAPVLRHFRVLPGRYPCIQQEPADDAAAGGAAAEIKE VVSERPRRSSPTPPIPGERRARQAGGGGSPSSISYRHRSRSISNLSEAGAAARRSGAA VLGKLRKVSVTSIDGTSTDDDDEESDVSSLSSARRNWDFTGGVKDRRPVAPRRRGNSV SPSKSGPNSTITQNDDPMESVRRKAEKAFNVLSKRASAKMTRESSNCTVATPQSAAAS SSIKWCESNVMWSTLSSSLLKHGKEAVKQRDMALQAVLDGLLEASTTEKLIKCLSTYS ELQSDKEENPKELIDRFLKFSQELDHAIFIAQSQTKIRHVKACGSNSTSSASTKAALK AALDRKQSAILWIREAIEADLSPFSSHTRPTESPKLSLAESKPMTPLFCCSKPKCNCS KRSSRKASDGSSQGSNMSAAMDLAVALRSECNCWFLKYIDKFLDDIESETMYAPCDSQ VAGLLQQLKRVDDWLNRVALHERMLSVDRTNKDIMFSEEEESDACERRRDVQINIADV DSIVSDWCIHPRVIRA</aaseq>

Gene Sequence

<dnaseqindica>1..825#926..1174#1280..1371#1589..2261#3624..3707#atgccgccggtgtcgtcgtcgacgtcgaggccggcgtcgctgccgtcgtcgccgcacaggccggcgctccggccgggcagcctgcagcggctgctccggccgccggacccctccgacgacgacggcgccgcccccacggcgccccgctcctcccgcggcggcggccgcgtcctgctccaggtcaccaacatcacccccgcgctctccggcgccaaccctttctccggccaccacggcttctacctccgcctctccgactccgcgcgctcctgctacgtctccctccacgccgaccacgacgacctcatcctcaccaacggcctccacatcggccaggtcatcgaggtcgagcacctggtgccgtccgtcccggcgcccgtgctccgccatttccgcgtcctccccggccgctacccctgcatccagcaggaacccgccgacgacgccgccgccggcggcgccgcggcggagatcaaggaggtcgtgtccgagcgcccgcgccgctcgtcgccgacgccccccatcccgggcgagaggagggcgcggcaggcgggcggcggcggctccccctcttcgatcagctaccgccacaggtcacggtcgatatcgaacttgtcggaggcgggcgcggcggcgaggaggagcggcgccgccgtcctggggaagctgaggaaggtcagcgtcacgtccatcgacggcaccagcaccgacgacgacgacgaggagtccgacgtgtcgtcgctgtcctcggcgaggaggaactgggatttcaccggaggcgtcaaggacaggaggcccgtcgctccacggagacgcgggaacagcgtaaatccatttctttgaatctcccaaaatttcgcgccaaataacacacaaattgcaacaaatcaaagctgattcggtcaatttttggtctatcatttaggtttctccaagtaaatccggcccaaactctactatcacgcagaatgatgatccgatggagtcggtgaggaggaaagccgagaaggcattcaacgtgctctccaagagggcgtctgctaagatgaccagagaaagctctaattgcacggtggcgacgccgcagagcgctgcggcgtcgagcagcatcaagtggtgtgagagcaatgtgatgtggagcacactttcatcaagcttgctgaagcatggaaaggtatactggtatatctccctagttgattctactgcatttttttttgcttggttctgttctttcaacaagttaattctggtgattattgtttgcccccaattgcaggaagcagtgaagcagagagatatggcactgcaggctgtgcttgatggattgctagaggcatctaccactgagaaattgataaaatgcctgaggtgagtgatgtttagagcttatgtagaattggcgagaatgattgggtgaaaattttacatgaggattgagaaatttgggaataatacagtctgttagaacagtaaatttgattgatatctgatttcacttaattatagaattgtatgatcaagtttctatacttgtaaataacattgcaccatgtaattgatagttcatttccccctctttttgcagtacttactctgaactacaatctgacaaggaagaaaacccaaaggagctcatcgacaggttcttgaaattctctcaggaactggatcatgctatcttcatcgcccaatcacagaccaaaattaggcatgtaaaagcatgtggttccaattcaacatcctcagcttcaaccaaagctgctttgaaggctgcattggataggaagcagtctgccatcttatggatcagagaagccattgaagcagacctctcacctttttctagccatacaagacccactgaatcaccaaagctatcactggcagagtcaaagcctatgaccccattgttctgttgttccaagccaaagtgcaactgcagcaaaaggtcctcaaggaaagcatctgatggttcctctcaaggaagtaacatgagtgctgccatggacctggctgtagcactgagatcagagtgcaactgttggttcctcaagtacatcgacaagttcttggacgatatcgaaagcgagaccatgtatgcaccatgtgattcccaagttgcaggccttctgcagcagcttaaaagggtggatgactggctcaaccgtgtcgcgctacatgagaggatgctttcggttgaccgaacaaacaaggatatcatgttttctgaagaagaggagagcgatgcgtgcgagagggtacggagaaagatttatggagcccttttaaggcatgttcaatatgctgcaatggcgctagaaggtctaaatggtgtaattgatgaagagaaggacgagagaaaataacagtaactgtgcaaagagctttatcaatatatagaatgaacaaataaattttgtgtagctgcagataatataagtttaccatcgtcagaattctagctggtagaagcatgttaggcataacttccaaatgctgtctgataaatgttggatgctctgatggtattgttgcaactattgctaatcttgtctgtgatgagacatggcatccaaaaactaacaattgcctcaagtgcgactttaaggccatgaaagatctgaatagtactattggtgaacctaagtaggacattgaaacaaagctgaggatatctggtgcaatttacactctgatcaattacttgctacacttgtcattacatacttgcatacatgctcatgactgcatctcacatttcattacatgttcttcggtacatttcaatttgtgttgatgtactggtgatgtcaattgtcaagtgtactgcctttttcaaagttagggcccctttgaatcaaaagaattatgaaggaattttataggattgaaatcctataggaaattttcctatgtagccctttgattcaaaggattgaagttttccaaatcctacaaatttcctatggaatggcttatagtatataggttttggaggaaacttagcaagaggtccaacctcttggaaaaaatcctttaagtctatctctctcatccgattcctgtgtttttcctgtggtccaatcaaacgatcattcctatgtttttcctgtgttttgcaatcctctgttttacgcttacattcctgtcataatcctatgtttttcctattcctccgtcttttgcagggatgaagcaaagggtttacccctgtgtgtctctgggttagtatgtgtacaacaaattttgaattattttttagaaattagcctacctagtacctctcttttgataggattaagcttgtattattcctgtcaatgtatatttctctctcaaaaaaataaacaaggtataggattagtgttacaaatgccaacactgtgacatgaaaaatactcatctcaaatggaagtcaatcatatcacttgatctttgatcattaacatgatcatgattacttcttcttatggctttatggtaaatgccaagtagtaggaagaaaaatgaataaagttacattacatgtatgatatttgggactatatgggccagaatcaattaatctctatgcaattcaatgttagctctgtatatccgaggcgatattatttttgcagagaagagatgttcagatcaatattgctgatgttgactccattgtaagcgattggtgcatacatccacgtgtcatcagagcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0588300, RefSeq:Os07g0588300