Os07g0596000

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Revision as of 08:44, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0596000| Description = Zinc finger, DHHC-type domain containing protein| Version = NM_001188355.1 GI:297725840 GeneID:9267772| Length = 496...")
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Gene Name

Os07g0596000

Description

Zinc finger, DHHC-type domain containing protein

Version

NM_001188355.1 GI:297725840 GeneID:9267772

Length

4963 bp

Definition

Oryza sativa Japonica Group Os07g0596000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24913080..24918042

Sequence Coding Region

24915268..24915333,24915551..24915622,24915707..24915775,24915867..24916250,24917550..24917663
,24917770..24917811

Expression

GEO Profiles:Os07g0596000

Genome Context

<gbrowseImage1> name=NC_008400:24913080..24918042 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:24913080..24918042 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcggcatgggtggcagcttccctatcaccctctccaggtggtggccgtgtccgtgttcttggcgctggcgttcgcgttctacgtgttcttcgccccgttcgtcgggaagaaggtgttccaggacgtggccgtggggctctacacgcctctggtttcatttgtcttcttcatgtacatctggtgtgctgcaacagacccagctgacccaggtgtcttgaaatcaaagaagtacctaagattgtatggaagcggcaaacacaagcatccgaaggaattcagacatggcatttcagattcagggttgcaagtagagggaactggagaaaagcaagaacatgagtttgcagctgctagtgaaaagtcaacaactcgctacaaagacaataacccatcttgctgcagttcaacttcctctgtttttctcattattttctaccctctctatcttgttttttcctgctgccaaccacgggaatggtctgagcagcaagccagtgaggaaggaatgtttttctgcagcctctgtgaagttgaggtattgaagtacagtaagcactgcagagtttgtgacaaatgtgttgatggttttgatcatcactgcaggtggctcaacaattgcattggaaaaagaaactatatgaggttttttattctgatgacttcttccctattcttggtctacatgatttgtgcactttgggccagcttatcctacaatcagcagttggagtattggtgctag</cdnaseq>

Protein Sequence

<aaseq>MRRHGWQLPYHPLQVVAVSVFLALAFAFYVFFAPFVGKKVFQDV AVGLYTPLVSFVFFMYIWCAATDPADPGVLKSKKYLRLYGSGKHKHPKEFRHGISDSG LQVEGTGEKQEHEFAAASEKSTTRYKDNNPSCCSSTSSVFLIIFYPLYLVFSCCQPRE WSEQQASEEGMFFCSLCEVEVLKYSKHCRVCDKCVDGFDHHCRWLNNCIGKRNYMRFF ILMTSSLFLVYMICALWASLSYNQQLEYWC</aaseq>

Gene Sequence

<dnaseqindica>2710..2775#2421..2492#2268..2336#1793..2176#380..493#232..273#tcttctcttcttccttcccttttttttttctcttcccctcctctcgtagcccacgacggatgcggttgcgggtagcaggggatggagggcagatgaaacccgcgagttcttgattcttgggagaatcaccccgtgctcctcctcgcattgatcgcgagaaaagttgttcttttcttggtttcttcgttctgtttgggattgtgggggtttggttcttggcgacgcgtcgccatgaggcggcatgggtggcagcttccctatcaccctctccaggtgagttcttggtgacggaattctgctcctcctcctcttcctgggcggggagaggagttgatcttttgctgttcttggttgctgaagaatttagttgttgctgcaggtggtggccgtgtccgtgttcttggcgctggcgttcgcgttctacgtgttcttcgccccgttcgtcgggaagaaggtgttccaggacgtggccgtggggctctacacgcctctggtaaagattcttgcttttgcctccactgctgtcctctgttgagtttcgctgccttgtggtttggcacctttggtctttggatccccatcttggtgatgtctgatggggcccgtcagtggttgctggaacttgtggaagatgccaaattaagcaggcattacctgcaaatgtggtgttttagcacactcctgcatgtgtagtgtagatagtggttccagtgtttgtgtaccttctcgtttgttggaggttggtagtacaagctaccaagaattcagtctaatctgggaaattctggtgctatcatgtgacatgcctaactccttcagtcactgccagtttgttcaacagctctaattcagctttgtggttggtagaattttgcttgcattacgaggtttaagaacagtataggcatatttttgtgtatgtaatagcgatatggcacatgtagaaacactgaatcggagaaagcaggcattgtatgcattgaactctcaggtgcttcttggagtcaatccggttgattagtagtgctttgtggttgtacagattttgtacatgtttggtaggattttgtacctctgtttgatggagatggcatgggcataagttgtatttattgctaatatttgttgtttcttactggtccaaatccttctgataccatgccctcgtttttgtgctatcctcatcgttccaagatggtacaggcaattccttgggatcagtcatataactttattatgatattgtctgctacaaatgggttatcacagattattttaatgaccactcctaaatcctttgggagttttcattgcttttaagaaaattgttgtatttattttgtgatgagtagctgatgtttttgctaacacatttcctgaactccataggtatgaaatgaaacagcatcagaccccaataaacaagggttataatacattgtaaaattttgtaattcaaatatgatctgctactgaacatcacaaacagttgagttcacaaaactataaatttattgtgacaatggaacatactacatcatggattaacatgtgctgttattttttcaaacattacctgaacacagtgtttttctgatctgaatccaagcttgtgacaggcactctgttgtggccaaatggcgagcttgagcacgtatgcccttttaaaagaaaataatgacacttagcaaaagtgcaaaaccctgcatgaatttactttattccattatggtcaatgtatgcatttacttaacacctttatgatagaaatgtgtattttggctcctttcaggtttcatttgtcttcttcatgtacatctggtgtgctgcaacagacccagctgacccaggtgtcttgaaatcaaagaagtacctaagattgtatggaagcggcaaacacaagcatccgaaggaattcagacatggcatttcagattcagggttgcaagtagagggaactggagaaaagcaagaacatgagtttgcagctgctagtgaaaagtcaacaactcgctacaaagacaataacccatcttgctgcagttcaacttcctctgtttttctcattattttctaccctctctatcttgttttttcctgctgccaaccacgggaatggtctgagcagcaagccagtgaggaaggaatgtttttctgcagcctctgtgaagttgaggtatgcttcttgtatttctagctgttgagtacttgagttatgcttttcttctgtcaactcaactctttaatatgctgctaattttttataggtattgaagtacagtaagcactgcagagtttgtgacaaatgtgttgatggttttgatcatcactgcagggtaaggttatcctgaaacagatcatttcttattcatccattagcgagtatttagtaactctccttttctcctcaatctcaacagtggctcaacaattgcattggaaaaagaaactatatgaggttttttattctgatgacttcttccctattcttggtaagctcatgttcaatcagctacaattactcttataagattgtatggataggagtgctgcatagtgctctaatcttgttgtcattagtctataatgtttaccatagtcccagcatcagctacacttaaagtcttttgcatgcatataaatttggtcatggttaccgcatagagcattttattcctggtccttttcatcctagttgaccattgacaggtctacatgatttgtgcactttgggccagcttatcctacaatcagcagttggagtattggtgctagtgttctgctttgttgagcgaaaggaattctccattcaaattgtgtcaaagcttggaagcagcttctctgtggtgccttatgttattgtggtggtgcgtttggctgttctactttcaaattctagctatttcacctttcctttggagaaccagttgactctgttcacattttttcttgaacgctcaaaatgttgatctttgttcatacaggcatcttgtaccattctagccatagttgctttgctgccaattgcgcaacttctcttttttcacattcttctaatcaagaaggtaactcctaacccattcccgttttatgtaatgccacggattgattaggtactacgttgctattcctgataattttttagagcagcttgtacaccagattctcatacagtcataccctttgaacacttaaaaaatatttatgtattgaattagaaaaaatttattaaaaggacatccacaatgaaatgttaactttccagtgtgtgtcatattgttgcattctgaggtgatgcgatgttgaatctaaccatcatgttctcaacttcatacagggaattagtacatatgactacatcatcgccataagagagcaagaacaagaagaggttggtgggcagcagagtccacagatgtctcgtgtaagctcctacactggacttagcagtacaagttcctttggtggacgacgtcgtggttcatggtgtactcctccaagattatttcttgaagatcaggtaacaaccttgaagaatcttatgataaatgataaatggctgcatacctttcgaagtgacggtatgtctgtacagaaaaatcttactgctagcctttgtagctgtgcgatgtgctgatgcgaattgaagttaagtgatttgattgtttagctagccttgctaatttttagtctatattagacttgtcgtctttggaacttcctcttatgtttgtaaaattgcagtcctatattacaacaaatgcatatttatgtttcatcatgagtcgtatacatgatcataaaagatactactgtatggctttttttttttcgatttggcatttgccactagctgatcttgtgctactcaacttcttttcagttcgatgttattccgtcagaggctggttcatcgcataattctacttccaagaggaaagaagatgaagtaaggaggaagaagggttcaggtggtataaaaattagcccatgggcactcgctcgtcttaacgcggaggaagtttcaagagttgctgcagaggcacgaaagaagtccaaagttctactgcccatcagaaaagatgagtatgcagttggccatgaaacggacagtagctatggaggcacaagcagcagtaggattgatctaggccctgataacaagaggagaacaagcagaagagcaagacctcacaatgatttctctcttaaacctgttgccaagatttccgcagatgctcttgatagtcatggcagtgagttggttcctgaaacattatccagtttagcaccattgcagcttgaggcgcgaagcgcttttcatccaagtagagctgcatcctctgctaatggtggtggttcatcaccagacagcagcttggactcccctgatcttcatctgtaccgagtctcggctgtctcctcatctgcagctgaagacctgcagctgacaactcttacagccccaggaagcactccacagcaagggattgagctgtcaagatccaccagcgacgggtatgaagcatcaggaggcgaagacagtgatcgcatcccatcgcggatagttcatcgatcttcgaactgggcaagcatcatcctcagttctgatcaaagtgtggcttcatctggcatcctcgtgccgaagaacaggttgtcttgactccaaatcaattccatcctcagcttctttcagatgaatgaaaaattgtaaatggtccgtgtagattgtctcgttttccatcggtttctggtcctccatagtttcaaatcttgtctcagagatggttggatgctgcgtgaattctgaattggttggatgtttttggtgaactctgaattgttaggtagggaaagagagttgattcattcgtggtgcatccaaaatggttgtaattttgctctcagatgacaatggaatcaatcagaggttgatatatcttcagcctcctgggttaatgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0596000, RefSeq:Os07g0596000