Os07g0603100

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Revision as of 08:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0603100| Description = Nuclear transport factor 2 domain containing protein| Version = NM_001066745.1 GI:115473222 GeneID:4343835| Length =...")
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Gene Name

Os07g0603100

Description

Nuclear transport factor 2 domain containing protein

Version

NM_001066745.1 GI:115473222 GeneID:4343835

Length

4940 bp

Definition

Oryza sativa Japonica Group Os07g0603100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25315064..25320003

Sequence Coding Region

25315368..25315879,25316255..25316318,25316548..25316613,25316686..25316807,25316907..25317081
,25317203..25317438,25317518..25317866,25318746..25318883,25318979..25319026

Expression

GEO Profiles:Os07g0603100

Genome Context

<gbrowseImage1> name=NC_008400:25315064..25320003 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25315064..25320003 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctatgcaagttggggaatcagttgctcctttaagtccacaaatgattggaaatgcgtttgttcaacaatactacaatgttctccatagttcaccgggtcaagtttgtaagttctatcatgattcaagcacccttggtcgaccagattctaatggaaccatgacatctgtaaccacattgactgctatcaacgatgaatttctctctacggacttcagtagctgtttgattaagttagagaatgtggatgcacagttatccctcaatggtggtgtgcacattttggtaactggatctattggacacaatggcactatgaggcatagatttagccagtcattcttccttgctccacaagaaagcggaggctattttgttctgaatgatatgctaagatatgattctctgcaagaaacactgttgactgagacaaatgattctccacaagaaagactgttgactgagataaatgattctctgcctaaccatgttgatgataacactcacagtgtcacatttacatctgagccagagacttcaggcaatgtcaatgagactgcagacttggagcttccatctgcagagaatgtcaatgacaatgttgagaatctgcctgccaatgacagttctcccgaagaaaatgttcttgttgaggcatgcacggaagtggttagttcgtgtgcagagaacattcctgcagctgcacctgcacctgctcctcgtgcctcgactcagaaggatgttactaaacagtcatatgcatcagttgttaaggttacaaaggagggcacaccaactccacctgttgcaaagcccaagcccaaacccaaaccaaagccaactgcaaaagtgactgacaatgtggagaaagctgtgtcctcacctgtgaaacctactaatgcagctgataccacatctccaaatgacaaaaatgttcttgttgagcaagggtattctgtttatgtaaagcacttaccttatgaatgtaccacgaaagatgttgaggaaaagttcaggaaatttggtgctatcaggcctggtggtattcaagttcgacaccgtcagcccgatggattctgctttggctttgttgaatttgagtctcggcaatccatgctagcagcaattgaggcctctccagtttctattggctcaaaagcatccattgttgaggagaaacgaactacaactcgagttgttaatggtgtcacccatattgaaaacaatggcaatgctcggggtggtcggttccagcaagacaacagaggtggtggataccgtggggacaacttcaggggacgagaagcaggtttcgtgaacaatggtaactaccgtgatggtgataacatgaggaacggattcagaaatcagaacgagtactcagggcgtggtcgtgggcctcaggggaatggttaccatcagaatggtaacggtggtggttaccatcagaatggaaatggataccatcagaacggtgatggataccatcagaatgggaacagatacaatcagaacgggaacagataccatcagaacggagatgagtactatcagaacggcaatggcaatggacatcggcagaatgggtctggatactatcatcagaatgggaatggctatcgtcaggaccgcatcttccacaatgggaatggaaatgggcggcctgctcgcttcaatggacccaggcaaacaccggttcaagcgtag</cdnaseq>

Protein Sequence

<aaseq>MAMQVGESVAPLSPQMIGNAFVQQYYNVLHSSPGQVCKFYHDSS TLGRPDSNGTMTSVTTLTAINDEFLSTDFSSCLIKLENVDAQLSLNGGVHILVTGSIG HNGTMRHRFSQSFFLAPQESGGYFVLNDMLRYDSLQETLLTETNDSPQERLLTEINDS LPNHVDDNTHSVTFTSEPETSGNVNETADLELPSAENVNDNVENLPANDSSPEENVLV EACTEVVSSCAENIPAAAPAPAPRASTQKDVTKQSYASVVKVTKEGTPTPPVAKPKPK PKPKPTAKVTDNVEKAVSSPVKPTNAADTTSPNDKNVLVEQGYSVYVKHLPYECTTKD VEEKFRKFGAIRPGGIQVRHRQPDGFCFGFVEFESRQSMLAAIEASPVSIGSKASIVE EKRTTTRVVNGVTHIENNGNARGGRFQQDNRGGGYRGDNFRGREAGFVNNGNYRDGDN MRNGFRNQNEYSGRGRGPQGNGYHQNGNGGGYHQNGNGYHQNGDGYHQNGNRYNQNGN RYHQNGDEYYQNGNGNGHRQNGSGYYHQNGNGYRQDRIFHNGNGNGRPARFNGPRQTP VQA</aaseq>

Gene Sequence

<dnaseqindica>4125..4636#3686..3749#3391..3456#3197..3318#2923..3097#2566..2801#2138..2486#1121..1258#978..1025#ctcctctctccgtctcgcttcggttccttcctcgagtcgaaacctcgcgaagccgccgccgccgccgccgactctcgctagggctagggttttcctcccgccgccgggagcccctccccctgcaaccgcgcaaggttcgactcctgttcctccgcccccccctctctctctcttgcaatctctgttttgttttgtttcgtgcacgatgatcgcggctggtagggcatgattcgtgcgcgtgcgtcccccccctcgtgttaattagggggttcttttgggtgatgtgtaattagggtttcgtttggttgatgtggtgtagtgataggggttttatgtgtggggaagaggtatccttgggggagatttaggttggggacgagttggttctaagattttgcgtttttggtcgggcgatggtatgagtgggatgtcccttttagtaggatttataatgttatgccttgaaaaaaaacctttttgttgtattgaattcctgtttattgtaggtttaccgtatattcagtgtttctaggtaccgtggtttgtgttaaataagtttttccttaatgtgtttaataagttttcaagttgttttggttattggtattgtcaaaataatcccaggttctgattgtagtgaaaatttgctggtttgtttgtttgtcaaagcgtaagcctttatgattcgaagtggaaagtcaaataatttgcatggattgttgttttttactttggttttcctttgctgtaacagtagttatctgctgcgtatatcatgttgttaccatcgggtttggctcctgagctgtggagctcatacccaggcattcgctgatctgccaattaattcaccttttctgttttattctggacccttactaatagctttaaaaacctctgtatttatgatgctgctattacttatgtattcgcctcaaagctttcggatattaatcagtgctataccttccacagggatggctatgcaagttggggaatcagttgctcctttaagtccacaaatggtattatcccctttctgtcgttctactcccatatattttatatcgatctactcccatgtagctgaactcaacgtgattttggtctttctttccagattggaaatgcgtttgttcaacaatactacaatgttctccatagttcaccgggtcaagtttgtaagttctatcatgattcaagcacccttggtcgaccagattctaatggaaccatgacatctgtaaccacattgactgtaagttttctgcaataggacatactctttcaattagttataaattatgaatacacactcttaggctgggcaattttcgaattagcagtatggatgtacatgcatttacttgtatcaaatttgtggaacttgattttcatttatgcagtggcatttacctctacacattattcagaatgaaaacacatgagcatcaaatgcgatgatagatattctgtcagcagttatagttctatttgcttgttaagttcagagaaatgcgctgggatggtaattattaatagatttttctgtgtgccttcttaagagagaattttgactgcaaatcagcatgcagtatccgtagaccgtagtaccgtggtagttgcatagttgcagcatgcatgttgctgtatgtcaattattagaaggatgtgcatggcctttaaggtcgtcttactatggaacattcatgtatgattcatcaaacatgtaacgtcgtttgataggatcgtaggataatgtgacatctacattcagtagagtattctaacttaatttcatatttatgtaatctgtaataagtatttaacacggacatattactttgttcctacaattcacttgttagatactgcctcgttcacttttataggcattttggttccaaaagatcatttattttttatgattttcaccaagaattagttaacttagcagtacatttggtgtattttcatacttcaaagtgcatacacgtgatattggttttatagctatcaagaatatatttcatgagaaactaagggtcgatatttcttgtagtctttttgaagtcaaatacaccttatataattaaattgatggagtgtaatttatttgtttgcgttgcttgtccaggctatcaacgatgaatttctctctacggacttcagtagctgtttgattaagttagagaatgtggatgcacagttatccctcaatggtggtgtgcacattttggtaactggatctattggacacaatggcactatgaggcatagatttagccagtcattcttccttgctccacaagaaagcggaggctattttgttctgaatgatatgctaagatatgattctctgcaagaaacactgttgactgagacaaatgattctccacaagaaagactgttgactgagataaatgattctctgcctaaccatgttgatgataacactcacagtgtcacatttacatctgagccaggttattgtatttcattacttcacctttggctgaccatattcccttcaatatgtttgctaaaattacaatgttttaccagagacttcaggcaatgtcaatgagactgcagacttggagcttccatctgcagagaatgtcaatgacaatgttgagaatctgcctgccaatgacagttctcccgaagaaaatgttcttgttgaggcatgcacggaagtggttagttcgtgtgcagagaacattcctgcagctgcacctgcacctgctcctcgtgcctcgactcagaaggatgttactaaacagtcatatgcatcagttgtgagttttctttttccctgcacttcatccgtatactcaattctgcctgaattatgaatacacaagaataatgccctttttgtttcaatgcttactgttccttctgtggtttgcactacaggttaaggttacaaaggagggcacaccaactccacctgttgcaaagcccaagcccaaacccaaaccaaagccaactgcaaaagtgactgacaatgtggagaaagctgtgtcctcacctgtgaaacctactaatgcagctgataccacatctccaaatgacaaaaatgttcttgttggtcagtttatcctttgtttcatgttttatttaagaagaaaaaagcatgcatgttgttatttatactgaagtgaactataccaaaacgttgtttttgtagagcaagggtattctgtttatgtaaagcacttaccttatgaatgtaccacgaaagatgttgaggaaaagttcaggaaatttggtgctatcaggcctggtggtattcaagttcgacaccgtcaggttagtgaaagcttgtatgtaggtttggttgctctaatcatttgttttgacatttccaccatgtttctgcagcccgatggattctgctttggctttgttgaatttgagtctcggcaatccatgctagcagcaattgaggtttgtttctcggagtgttgacctcagtttgtagtatgctcataagttacctcgctaatttgggcttcactatgctagaattctatctgcagttatgacgggctgggttttattataatttcatttagctgaagtgcattgtttgatgtggtttcaagagggagcaaatttatatctccccctacttgtatagcatatggtctaaacaagtgaatatctgttattgtaggcctctccagtttctattggctcaaaagcatccattgttgaggagaaacgaactacaactcgaggtgagcaagctttctgatcttccttagcaaagacaccaatggcatgttctgttgtcataggtctaggacaggttcacaatctgcgtgttaataggctttgaggttgcttatgaccttctccaaccacgcacacgcacacattgagaatcttatattcttatatatgtgaatggtacaggctcaatcaatttgcaatttagtatggtgatgtggtatttctgcttccctgcgcatttcatttagaaatctcacgagtggcctttttgaatctaagtgcaaagatcagcatcttttgctgctggtcattggtttatatatttcacatcacttgcataaactgatgtgccatttccccttatttcttctcactttcagttgttaatggtgtcacccatattgaaaacaatggcaatgctcggggtggtcggttccagcaagacaacagaggtggtggataccgtggggacaacttcaggggacgagaagcaggtttcgtgaacaatggtaactaccgtgatggtgataacatgaggaacggattcagaaatcagaacgagtactcagggcgtggtcgtgggcctcaggggaatggttaccatcagaatggtaacggtggtggttaccatcagaatggaaatggataccatcagaacggtgatggataccatcagaatgggaacagatacaatcagaacgggaacagataccatcagaacggagatgagtactatcagaacggcaatggcaatggacatcggcagaatgggtctggatactatcatcagaatgggaatggctatcgtcaggaccgcatcttccacaatgggaatggaaatgggcggcctgctcgcttcaatggacccaggcaaacaccggttcaagcgtaggcgtttcttgaatatccaaaaaatccttttgtcaatcctaggatcgccttatttatctgtgttcttttgcaccccattcggctgcgacaaagttcagtcccagcccttcgttttgcctcgatgcttttgctgactagttggcatgttctggatgtacttggtgagaccaggaagtgtaattttggaaaggttgggagcttactgcaaggttcgtgacttcatgtcgagacatgctatctaatatatgcattagtatttatggcacgcagatggatgaaggatctgttgtgtgcttttccttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0603100, RefSeq:Os07g0603100