Os07g0603600

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Revision as of 08:45, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0603600| Description = Similar to Avr9/Cf-9 rapidly elicited protein 246 (Fragment)| Version = NM_001066749.1 GI:115473230 GeneID:4343839| ...")
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Gene Name

Os07g0603600

Description

Similar to Avr9/Cf-9 rapidly elicited protein 246 (Fragment)

Version

NM_001066749.1 GI:115473230 GeneID:4343839

Length

3787 bp

Definition

Oryza sativa Japonica Group Os07g0603600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25360014..25363800

Sequence Coding Region

25360015..25360053,25361727..25361963,25362764..25362907,25363033..25363164,25363261..25363548

Expression

GEO Profiles:Os07g0603600

Genome Context

<gbrowseImage1> name=NC_008400:25360014..25363800 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25360014..25363800 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gccgacccggagctccacccgcagcagcttctcgccaaggatttgaacactaaagatcttgaaaccaacatcattgttcttgttcatggaggaggttttggtgcttggtgttggtacaagactatagcacttcttgaggatagtgggttcagagtcaatgctattgacttaacaggttccgggattcattcgtatgatacaaacaagattagcagtctcacgcagtatgctgagccgcttacatcttaccttaaaagcctaggtgacaacgaaaaggtgattttggttggacatgattttggcggtgcttgtatatcctacgcaatggagatgtttccatcaaaagttgcgaaggctgttttcctttgtgcagcaatgctgaaaaatgggcatagtactcttgatatgtttcaacaacagatggatacaaatggtacactccaaagggcgcaggaatttgtatattccaatggcaaggagcagcctcccaccgctatcaatatagagaagtctttactgaaacatttgttgttcaaccaaagcccctctaaggatgtatctttggcttcagtgtccatgagacctatcccctttgctcctgtgctggagaagctggtcctaacagaagagaagtacggatcggtgcggcgattctacgtcgaaaccacagaagacaatgccattccacttcatcttcagcaaggtatgtgcgacatgaacccgcccgagaaggttcttcggttgaaaggctcggatcatgccccattcttctccaagccacaagctctgcacaagacccttgtagagatagcaaccatgccaccagtcaaggcatcatga</cdnaseq>

Protein Sequence

<aaseq>ADPELHPQQLLAKDLNTKDLETNIIVLVHGGGFGAWCWYKTIAL LEDSGFRVNAIDLTGSGIHSYDTNKISSLTQYAEPLTSYLKSLGDNEKVILVGHDFGG ACISYAMEMFPSKVAKAVFLCAAMLKNGHSTLDMFQQQMDTNGTLQRAQEFVYSNGKE QPPTAINIEKSLLKHLLFNQSPSKDVSLASVSMRPIPFAPVLEKLVLTEEKYGSVRRF YVETTEDNAIPLHLQQGMCDMNPPEKVLRLKGSDHAPFFSKPQALHKTLVEIATMPPV KAS</aaseq>

Gene Sequence

<dnaseqindica>2..40#1714..1950#2751..2894#3020..3151#3248..3535#cgccgacccggagctccacccgcagcagcttctcgccaaggtatctatccccttctcctctcttgcgtccccgggctcgcactggcgttgcgtgcgcgcgtgcgccgccgcgtggaattttcggcgccgtactcttttgacttctcctgttcttcccccaatctcgtcgttgggcgtacgggagcttcgcggttgaaatctcgcgtcttcctcgtggctctgcgtactcctttggttgcagattgctcctccgcttctcatctccccgattcactgtactgagtagtactgaacggcttaattcgtcgatttttcttcctctgatttggttaccgtctacctgaatcgagtccgctgcgtccttccatctcgctcagcttgcttctatggcgattggcaattcggagtaccaactgccaagtaatagcagttgtgcttcgcggtgtgacactggctggcaagtggggcccacaaagatgtaggtcccatgcgtcagagggcccaggttgccgaagtgaaatgaaatgaatgatccattggatcaatttgagcaggatgtgaaatgatttcagatagttactaccttttctttgactagagtttcagttctatcctggttggtgatggcctgctgttccatccagagaatcgcctaattcttcgtaatgtgcatgtggatgaagtgggatcaaagagaattgcaattataattttcctatctacaagaaagatcttttaagtatctttgggacccgatgaatcattagtcatgtgaacaggttggacaacgacctgacattgatttggtaaaagatttaatagcaagcaggaaatttcagttgtgtgggtgataataatacatatctgggtctgtttcagaagccctttcatggatagagggcagttgaattcggttgttttttattgtttccagggaaattttcttgtcgcgtgcattcattttttgtagagtttggacaaagggttagcagaacacccaacctgtgcaatggtggggaatcctgaatttctttacttcaagttgtttttagtcctgatacattcgtgttgttcagttctgttgttaccaggattggctttgtcataactggaaatggctgctggcgtggaaaactaagctatcgcgacttttatacctgcattagtaactaataagaaaataaatccctaagctaatcttgactagcaactagtagtatgactagtaagaacataccagcctgctaggaaagcacggttgactgggaagtttttgtttgatattttcaatgtcacctgtcacttggtcagttagttgatgaaggcgtatgatggcagtacttgtacgacgaattagcaccttgtttgactgttcattggtctcattgtttttctagcacttgtgacttgtgagacccagaaaaatatcaatcccgcagtttcgacttcagaaaactggaagtgcacatacacataataattagttttgtcagctcttgagcttttgtgtttgatgattctactattgatggacttcatttttaagtatgttttaacttggttatcagaactccatatttttctttttaatctcagttgctgcttgagcaatactgatgtttcaatttgtgtttgtcctgttgcataatgttcagtctctgttacgtgcatgtaatcactaccacactaaccaaaggaatgcttctgaaacaggatttgaacactaaagatcttgaaaccaacatcattgttcttgttcatggaggaggttttggtgcttggtgttggtacaagactatagcacttcttgaggatagtgggttcagagtcaatgctattgacttaacaggttccgggattcattcgtatgatacaaacaagattagcagtctcacgcagtatgctgagccgcttacatcttaccttaaaagcctaggtgacaacgaaaaggtttgctctcttccatgtattgattcatgatgagtttgcaccattgaaataagtgaacttccatttcggagtattttagtaggctattactaagtgctgttttacccctaaccaatttctattgtctatgctgaatactctttatgtcttgagtttctgacattgcactacagcttagataaaatatgcaaataggggtcatagttacttagattttaggtgaaatcctggagagagccctgctgaaatggttgctcatttcttgtatctttgaactttacacataatggtaaatattaatgtctccagaagctcataaatttatattaccaatgtttgaacatgctaattctaaggacttgggtgtttcatacaggtctctgtagcaccctttagcctgtaatggtacattttactctgtggggatcataattcattagagaagttttgacactgatgcaattagtttcatggctatgtttcagagctttagcatcactaagtaggtccaattgtagtaatttgaagctggctactgcctcactatacttcaatgtctttctcaaatctgatgatggataggacgtttatcatttctaatggctgccagaatattcctgtgctattctgtgcatatgcctcatgttttcttgcaattgtttgaaatatttttgttggcactaatgctgatattctaaagcagcataggattattcttcgaatagatttttaatgtatagttcgataaacatcagagtccctgtaataatatgcattttgattcttttgttattacacaggtgattttggttggacatgattttggcggtgcttgtatatcctacgcaatggagatgtttccatcaaaagttgcgaaggctgttttcctttgtgcagcaatgctgaaaaatgggcatagtactcttgatatgtttcaacaacaggttcatttctatcacagcatcaacacaattttaaagataaaaggaatagagccaaagtcttctgcattaaaatttatttgaatgacaatacactaatgcctgttcattctacccatacaacacagatggatacaaatggtacactccaaagggcgcaggaatttgtatattccaatggcaaggagcagcctcccaccgctatcaatatagagaagtctttactgaaacatttgttgttcaaccaaagcccctctaaggtaggtcttgttcaaccatcccgatcatatcatgaaatcctagttttttcagaattgggttctaacagtacatcattgtgttcttgattcttgaaggatgtatctttggcttcagtgtccatgagacctatcccctttgctcctgtgctggagaagctggtcctaacagaagagaagtacggatcggtgcggcgattctacgtcgaaaccacagaagacaatgccattccacttcatcttcagcaaggtatgtgcgacatgaacccgcccgagaaggttcttcggttgaaaggctcggatcatgccccattcttctccaagccacaagctctgcacaagacccttgtagagatagcaaccatgccaccagtcaaggcatcatgagagctggggtttctcccttcaggtttcaaggctggtgactggctgattgccattgttgtgcagttgcttcttgtatgtaatatgttgagaatgggggtgtaatgcttgagccaagatgttatggcttggaggtcgtttatacaggatgtttgtcacagaggctcactgcgtagcagcagagtaggggagctctgattttctatacatggtgaatcacatcctcccagtgcagactgacctggagaaattgct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0603600, RefSeq:Os07g0603600