Os07g0612500

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0612500| Description = Transcription factor TAFII-31 family protein| Version = NM_001066787.2 GI:297607607 GeneID:4343878| Length = 6080 bp...")
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Gene Name

Os07g0612500

Description

Transcription factor TAFII-31 family protein

Version

NM_001066787.2 GI:297607607 GeneID:4343878

Length

6080 bp

Definition

Oryza sativa Japonica Group Os07g0612500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25877131..25883210

Sequence Coding Region

25877131..25877162,25879704..25880628,25882896..25883210

Expression

GEO Profiles:Os07g0612500

Genome Context

<gbrowseImage1> name=NC_008400:25877131..25883210 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25877131..25883210 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaccggcgccgaccaggcaccacctcctcctcctcctccccctgtggcggccgcctccgccgccgccgacgagccgcgggacctgcgcgtggtgcgggagatcctccactcgctggggctccgggagggggactacgaggaggcggccgtgcacaagctcctgctcttcgcccaccgctacgccggcgacgtgctcggcgaggcgaaggcgtacgccggccacgccgggagggagtcgctccaggccgacgacgtccgcctcgccatccaggccaggggcatgtcctccgccgcgccgccgagccgcgaggagatgcttgatatagcacataaatgcaatgaaattccaatacccaagccttgtgttccttctggatcaatctctcttccacattatgaggatatgctattgaacaaaaaacacatatttgttcctcgagtcgagccaacaccccatcaaattgaggaaactgaagatgattataatgatgatggttccaatgctaatgttgcctctcccaattccaattatgaccaagatctttttggatcgatctctcttccacactatcaagacatgttattgaaccaaaaccacctatctgttcatcgagtggagccggcacatgatcaacttgagaaaatcaaagatgatggttccaatgacaatgctgactcttctcattccaattatgtccaagattcttctggatcagtgtctcttcaacatcatcaggatatgtcattgaaccaaaaccacctatttgttcatcaagtagagctgacgcttgatcaaattgaggaaattaaagatgatggttctaatgacaatgttgactctcctaatttcaattgtgtccaagatccttctcgatcggtgtcttttccacattatcaggttatgccattgaaccaaaaccatctatcttttcatcaagtagagccgatgcttgatcaagttgaggaaattaaagatgatagttctaatgataatgtcgcctctcttgattccaattgtatccaagatccacattatcaggacatgttattgaaccaagaccacctatctgtccgtggggtagaaccgacacttgatcaagttgaggaaattgaagatgattgttccagtgacaatgttgcctctcctgattctaattatgacaaagagaagaatgacagtaacaaacagaagccttctaagaaggtttctcaactcaatactttggttgctgcagttgtacatgagttgtacaactggatctcatga</cdnaseq>

Protein Sequence

<aaseq>MDTGADQAPPPPPPPPVAAASAAADEPRDLRVVREILHSLGLRE GDYEEAAVHKLLLFAHRYAGDVLGEAKAYAGHAGRESLQADDVRLAIQARGMSSAAPP SREEMLDIAHKCNEIPIPKPCVPSGSISLPHYEDMLLNKKHIFVPRVEPTPHQIEETE DDYNDDGSNANVASPNSNYDQDLFGSISLPHYQDMLLNQNHLSVHRVEPAHDQLEKIK DDGSNDNADSSHSNYVQDSSGSVSLQHHQDMSLNQNHLFVHQVELTLDQIEEIKDDGS NDNVDSPNFNCVQDPSRSVSFPHYQVMPLNQNHLSFHQVEPMLDQVEEIKDDSSNDNV ASLDSNCIQDPHYQDMLLNQDHLSVRGVEPTLDQVEEIEDDCSSDNVASPDSNYDKEK NDSNKQKPSKKVSQLNTLVAAVVHELYNWIS</aaseq>

Gene Sequence

<dnaseqindica>6049..6080#2583..3507#1..315#atggacaccggcgccgaccaggcaccacctcctcctcctcctccccctgtggcggccgcctccgccgccgccgacgagccgcgggacctgcgcgtggtgcgggagatcctccactcgctggggctccgggagggggactacgaggaggcggccgtgcacaagctcctgctcttcgcccaccgctacgccggcgacgtgctcggcgaggcgaaggcgtacgccggccacgccgggagggagtcgctccaggccgacgacgtccgcctcgccatccaggccaggggcatgtcctccgccgcgccgccgagccgcgaggtaattgatttgagcccgaagcccctcttcgcttttgtggaattttttttcgccggtgttgtttgctgcggaggacatcgaattttccatcgtcggttgcgaaatcgtcaggactgcgtggtttttggggttggatcttgcggttttgtgtccaaatcggagccttttagtcttaggaataggtgaatttctgcaaaaacggaatccttttgccttcggatcaggggatttgtgctatcaaggcagctcactaaccctttagcctttggatcagtgtatgttatacagatacgccatttgtagactaagacccctttaattctaaggatttattgagaaacttcataacatttgaaaaaaaaaacatgttacaaaagcagacactcattcacccctatgaacacaaaacctatccttatgaacaccccctaaaagactgaaccggcatgtgttgtgattcatgaagtcaccacaaagatgtctcgctatcaatggatatgttgcctatcaatgaaagaataattaatcataaatgcaagcacatgtaagtctagaacttgaacctgggtaggctgattccaccacaagaacctaaccagttgagctacgctcactttgctcctatttggccctttgatataaaggattggagctttttaaatcctataaaattcctatggaatgacttattacatatagattttgaaaaaaattagcaagatctcatatctcttggaaaattttcttcgagtctatttctctcttctgatacatgcatttttttcttgtggtttataaatcaaatgactattcctgtctgttttcctgtgctttatactttcattcctatcaaatttcgtgcttttcctattctccgttttttaatccaatgtttcaaaggagctttaataggtgtggatggtatacttttttggcaagaagatgatataactaaattaatgctgacaagattttttctttaaaatacttgagcttctaaccctacttaattgtcgagtgctctccaaaattcacaaagccgcaataccaaattggaaaccgctctttagcagttttcttggtttttgtgaaaaattgataaagaaatgatgaaattcagatatatttcatttaaaattggaaattcacttggttttctatttgactggttaacaaagctgttttgttaactcaagccagttcaaaacctcaaaattgcatgaaaatcaagcagtttttgttggttttgtaaaccgtgttggtcccttttattaaattttaatgtttctttactcactaggaagctcttcttttgagagcgtaggctagttcctctaaggttagttacaaggtggtgataggcatgtgaatattggataagcaagtcgatggcattgtctaaggaggaaatggtgtataaggcgacccaatggagaggaggatgaggttggaatgtggtagaggaggtcgggatacaaagaagtaggtaatagttccaactgaggatatgatgaatgggttttatggtggtgaagaagtatgcggcggaatctttgggcagcaggatgtgggagataggatcacacttgggttggaggaggttgatgtttgtggcaaaaaaaaggagcattgaatgtggctctggtagcaaaagaagaagatcaatcacaagcataggtaatttgatggcatcaatcaatgtaaaaaaaagataaaatagcatatgagagggcaaaataaggaagtgaagctagaaaataagtgcaacaaaaggagaggcaattttttacaatggaaaataaggggcacggtcaattatagaggaaaaaataactctatattacttatcttttttttaattcataaacttcataagtagagctaaaaatatgatatgatgttttgggggttatatatgatgttttttagccaaccatacattgtcatgtcaatcctagaagtctcttatctattcttgttcaaattgaattattttgcaacgtagaaatgctcggttgggcctatacaaggtcgagaaagtgacctaaactagccaccctaacatttctattatattatgcaacaaaatcatcttaagacaagttgtttttttcccaataagccagcccattaagggctttttgtgggtctattcttaaggaattttataagatcctatgttcaatcattatttaattggttgctataacgtccatatacacatgaaaaaattgtcgtaacatgacggatatcttcactttggacaggagatgcttgatatagcacataaatgcaatgaaattccaatacccaagccttgtgttccttctggatcaatctctcttccacattatgaggatatgctattgaacaaaaaacacatatttgttcctcgagtcgagccaacaccccatcaaattgaggaaactgaagatgattataatgatgatggttccaatgctaatgttgcctctcccaattccaattatgaccaagatctttttggatcgatctctcttccacactatcaagacatgttattgaaccaaaaccacctatctgttcatcgagtggagccggcacatgatcaacttgagaaaatcaaagatgatggttccaatgacaatgctgactcttctcattccaattatgtccaagattcttctggatcagtgtctcttcaacatcatcaggatatgtcattgaaccaaaaccacctatttgttcatcaagtagagctgacgcttgatcaaattgaggaaattaaagatgatggttctaatgacaatgttgactctcctaatttcaattgtgtccaagatccttctcgatcggtgtcttttccacattatcaggttatgccattgaaccaaaaccatctatcttttcatcaagtagagccgatgcttgatcaagttgaggaaattaaagatgatagttctaatgataatgtcgcctctcttgattccaattgtatccaagatccacattatcaggacatgttattgaaccaagaccacctatctgtccgtggggtagaaccgacacttgatcaagttgaggaaattgaagatgattgttccagtgacaatgttgcctctcctgattctaattatgacaaagagaagaatgacagtaacaaacagaagccttctaagaaggtttctcaactcaatactttggttgctgcaggtaaagacaaagtagattgctcaactgaactttcttagatgatcgtccaatggatgaaccattccttttcttttgaaacatgcacaatttttaatcttgcatttttattgccttttattaaacataccatgtgcctaattttagaatttaatattctcatcatagcctgaaacattgttgtaaagattttaatgcaaaacatgcatgtcttggtattgggtctatgtttgaattaaatattgtattacatggttactatagttatcataagtagtcatatatatggtcccctatgcccttggggggttgattttggtttccattaaaatctacatatgatgaaaacttgctgagctttttagcttgttttcatatcttatttaattatcacatgagcataatacatattgaataaaaaaaagcaaaatatttattggtaatgagtcgcatgtctttttgtgaagtaccacagttgttccatttgaatattagaatctacaagtttcatgaaaactgtgttgaggtgagcaaaaatactcaaaataaaagtgttgccttttgggttgagttaatgcactaataacttcaaagtaaggatgtgtagactggtcaataaccggctactagtgttgtgtttaggatggagcgttcatcatgttataaccaatacatagtttgtctagttacttaagaaggttctaaacatgaggttaaaggtgatcttagcaacttatgcaatttggtctagatattgaatgattttgagtggtttggatgagcattcatacaaacttggctgagaaagtgctattataggggagggttaatgcaagtaatgttgcatttcgacaagcgaaccaaagagacgatattctaaaatctaggaagccaatatgaggaaatgttgagtagtggcgtacaagcaaccaactagaaaagaaagatatcttgaaagtagagtgatcagggtcgacattgtgtaggaaagattataatgaaatggaaaacatacgaagaaaaactaggtagatcacgagggtgaaaaggtatgaaaaaatggagagagatagagggaaatgtgctaatagtagatgaattgttgtgacatgaccttgtcacatagaattgctagggcacactatatttacatgccaatatatttatattgcattttcctacatctaagtaattagatttctcgtacaattcatacttgggtatgatattctcatggatagttggggatgtcagcaatctatagcttacacggtcccttatgaaagactctattggtcttattgtgctccttgtgagcacatttggatacacattcaaatagattaagataactcgatggaatgtataccctcaaattctttttcgataatgtaatcaatattaccctattatttttctagcatgaaaatctcagatcaatccaaaaccatgtccaactcaatagttatatatcataataatttacaactcgtccactcataaattatatttttttaaagaaccactcaccatcccttccctcctctttttcatatttgtatccaataaacaccttgcccattctcttgctcatccttctgtctgtttgacagattggaccaatttatcactcgtagttgaaaggaacaagagcgatttaatgatatcttatcacttgtaattggacttcaagcctctttttttagaactacttcaagcctaccatcatcgagttatgcctggtgtcgtggcagctcggtagagccatgatatcgactgcgcagcattgtcacgtgtgtcatggatctagctagcctgcctttggtgtgttggtaaggcttgaggccatggggctgcgggttcagctttgtggtgttcttgaattggtggttatgtctggcacatagggtggttgtgtgtgaggatttgattgtggaatgacgaaagctttgtcaaattcttgcaagctttgatgacggcaacaatcttgagcgtcgtcacgacatcccatttctccacacaagtttccatattagaatcttggtccgatttcccaaacaagcaacggcgacgtgagcgtccccatggaattgttgctttggagaatcttcttcctatgacagtggccattattaggaacttagtggcatcttggaccatcttgtggctagggttcaccttttcgtatcggaaattatacccgcttatcaacggtttatagaaacccgataaaaaccaacaactttcggtcaacacggtatgaaaaccagctaaaactgaccggttttgaaaacatagcagtgtgcacgtgttttccgtgtaacagacaaaacaaattaggtctaatgtctagtttcacgtaaaaccgttttgttctatcttcttgatgaaaaggctatcttttgctatttaactttggaaattgctatgcatatgacccaactgtccgactcacgtacgattgaatttgatcaacggttgtaaacggctgcagtgtatatgaatatgctatcatttgattgatctataattgcttgtctctagttgtacatgagttgtacaactggatctcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0612500, RefSeq:Os07g0612500