Os07g0614100

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0614100| Description = Alpha 1-2 subunit of 20S proteasome| Version = NM_001066796.1 GI:115473324 GeneID:4343891| Length = 4485 bp| Defini...")
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Gene Name

Os07g0614100

Description

Alpha 1-2 subunit of 20S proteasome

Version

NM_001066796.1 GI:115473324 GeneID:4343891

Length

4485 bp

Definition

Oryza sativa Japonica Group Os07g0614100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25949414..25953898

Sequence Coding Region

25950196..25950267,25950533..25950592,25951232..25951327,25951570..25951655,25951762..25951820
,25952253..25952349,25953319..25953400,25953489..25953580,25953716..25953833

Expression

GEO Profiles:Os07g0614100

Genome Context

<gbrowseImage1> name=NC_008400:25949414..25953898 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:25949414..25953898 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggaagccgaggccgcggcggtggtcaccggaggcggcagccgcgccgccggccccgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcgactacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacgactccgtctacgtcctcacccatcggaaggaggacaagttgcacgacccgacgaccatcacgaacctgttcgcgatcaccgaccggattgggctgctcgccaccgggatgccaggtgatggaagggcaatagctcaggaggcaaggaacgcagctgccgagtttcgcttcaagtggggatataaaatgtctccttgtatgttagctcaatggattgcagacagagcacagatccgcacccagcatgctcagataagaccttatggagttgtttctatgatctttggaattgatgaagagaaaggaacccccgagctcttcacatgtgatccagctggacaattctttgcacacaaggccacaagtgctggtccgaaagagaaggaagttatgaactttcttgaggaaagaatgaagagcaaaccttctctatcatctggcacaacaaaagggttggcaaaatctgcgttgaaacatgtcctggagggggatttctatgcccgagaatttgagcttggatttatcaagaaaggggatccaactgtaactctgcacccagtgaaattcaagcgcacgcggaggtga</cdnaseq>

Protein Sequence

<aaseq>MPEAEAAAVVTGGGSRAAGPADYERFITLFSPEGRLCQLDYAFN AVKLAGITSVGVRGDDSVYVLTHRKEDKLHDPTTITNLFAITDRIGLLATGMPGDGRA IAQEARNAAAEFRFKWGYKMSPCMLAQWIADRAQIRTQHAQIRPYGVVSMIFGIDEEK GTPELFTCDPAGQFFAHKATSAGPKEKEVMNFLEERMKSKPSLSSGTTKGLAKSALKH VLEGDFYAREFELGFIKKGDPTVTLHPVKFKRTRR</aaseq>

Gene Sequence

<dnaseqindica>3632..3703#3307..3366#2572..2667#2244..2329#2079..2137#1550..1646#499..580#319..410#66..183#accacgccaccattcccacgcctcacgcggcggagagagagagagagggtgaatttgctagcgagatgccggaagccgaggccgcggcggtggtcaccggaggcggcagccgcgccgccggccccgccgactacgagcgcttcatcaccctcttctccccggagggccgcctctgccaactcggtgagtgcccgccgccgcgacatgccccctccacgccgaccaaattcgctgctggtgtctgcgctttggctaacgatctgctgcttcaattccgccgcccgcctccccgtgcggccgtgctgtgtgctctcgcagactacgcgttcaacgccgtgaagctggccgggatcacctccgtcggcgtgcgcggcgacgactccgtctacgtcctcacccatcggaaggaggtgagcacgtcgcgagagcggaatccccttgtcccctcatttgtgattcattctgcggccgtttgatttgcttcgttcccctgatcaggacaagttgcacgacccgacgaccatcacgaacctgttcgcgatcaccgaccggattgggctgctcgccaccgggatgccaggtgagccacaactttgctctctcagattctcagttctaagtgctgcgtggaacatgcggtgcgcgcgtttggatcccgctggcacaatatcatttacgagttacgaattgcgaattggaggatcactcgactttatcctgccgtagaacgtctcagcgaaaccggttccaataattaatctctgcaactcttggtgttcatgagagcattgcgatgtgataaggatgttttacataccgatgatgcgcttgttcgactggatgctaattttgctgactccctatattgaatcagttttagtataggagtagtatgcacttccaggatacgtcatacatgctgattagatgaaatgttcagtgaatgagtgaaccactgtggtgtgattggatcctacatcctagtagtatgcactagatagaatggaatcttggccttggttgcacaatatactgacttatttggcagtcgatcgcccctttactaccatactctcatctattttgtgtttctgaggttgtaaatggctaatgtgacaatgtgagccagtactgtaactactgtactgagctattgtcttgtttgatttaacctatgtgagacagtaatgtaactaggcaacttttgcttgctaagtaatcaatcgttctatttgactactttcttgtatgatataatgtactgttttgttactaatgcctgataacttgttatatcattctgttggtggacagttccttcagtttagagggagttagggacttctcaattccatagcatgtgatttgtcactgagctctaaatatcttaatatagttctgtttagaattttatggaacagctagaatggctcacatcatcataagaaacactctagaggccaatggcaggacataccatcgcagtatcattttacttgtctgcttgttctgatcttttgagttttgacgggctatatctttattccaggtgatggaagggcaatagctcaggaggcaaggaacgcagctgccgagtttcgcttcaagtggggatataaaatgtctccttgtatgttagctcaatggtaagctttggtctaaatgaaatagatggctcattgtacaatacctatgtcttacaaacatctaaaatgatttgatcatcacgctattttatataatggttatataattatctctaggccgctctctgcttgtagggattgatcatttgccactcccattagaatgtcaaaggatcaatttcgcccattcacattaagacttagtattggatatatgagaaaatatggtgagagttcatatgagatcaacgggctgggaacttttctgaattctgataagcatatgctcgtgctttactatcaaacctacccttattttgttaagctacgtggatacattactctgttcaatcttcaatagcctaacgttgtttactaatttcactgaactgttctgcattttactagtggtgtatcattgcttgtttgtaggattgcagacagagcacagatccgcacccagcatgctcagataagaccttatggagttggttagtgctatccaatttgtgttttgtgagtggtgaaacctgccatcatcgtctaccatcaaaggattacaatgattactttgatcctacacattttcctctgcagtttctatgatctttggaattgatgaagagaaaggaacccccgagctcttcacatgtgatccagctggacaattctttgcacacaaggtattctaggaattttttgcagttcattaaatagctcttttcatcataacacaagttagtcgtgtttttttgtgaatgactacaacaaatgcaaatagcatgctgtattttttttcagttatcatgtgcaactagaaactgattaggtcacagagccactgaacaatctagatggagaaaccaccccataagctcaagcattttctgtatctgagaaacatgaatctcctatgtcattgcaggccacaagtgctggtccgaaagagaaggaagttatgaactttcttgaggaaagaatgaagagcaaaccttctctatcatctggcacaacaaaaggggtgtgtgttactattcttagcaaaccatgaaattgaacttatccaatgctgactagaaatgtataaaatggcattcagattagtgagtaaactaggtaagcattgatctgtaatggaaaaaatgttattgaattttttagttacagtaacatgttcatatgaaatgtgatggttcaacaccaagccacacattgcagacagtacaagatatccaaatctcatacatgcttaaatactagtaactagtatttaacacaacaaaagttcccttttctctgaagctgaatttgagaacatcattattaagggcaccactctgttagttctctttggatgcttaccacatgaagttttagctgtttctttaacaacagagtgcgttttgggatgtctatctgtgcagcatcttcgacagactactgtcaataatgcatgcctgcaagttcttttttccctcatgctgttgcgtatttatttgtacattagcacttttgtagtcacaagccctatccaatacggtgatccaatattttgatcccctttgtgattaatttttactgactttgtttccagttggcaatacggtgatccaatattttgatcccctttgtgattaatttttactgattttgtttccagttggcaaaatctgcgttgaaacatgtcctggagggggatttctatgcccgagaatttgaggtagtgctcattcttagccctattgtagatatgttctgtttgcactcactattgttaaataaaagagtgattttacggttcttgaggagataccgaaagataccatattttctagtgtaaaatttagtacatcccagtgtaaggtaaaaaaaatgtactaaaaattttggaattcttaaagaatgtaaaacttctctaaataaaacgttaagaaatatttgcactgccattatactgaacgacgcaagtcaaactttcttgtcagcttggatttatcaagaaaggggatccaactgtaactctgcacccagtgaaattcaagcgcacgcggaggtgaaggacgagagcagaacaaagtgctcgatataggacgatcaccagtctttcaaatcttttacagcatggaagttatgcaaaaccattaccgctaactgattactgtacgctatagctatatgtatgactgcgctcaagctgtgtcaagtgtcaattatgagttgcccccggatttacgataccaactgatgatcacacatcaacacttcaaactgtaactgtctacgaaggaactgcatcctcctgctcccgtgtaaccttagccagggataattttcctatgaagttggtcgcaaggctgccgaggaagagatctccgttgaactctgtcaccgaagtgaccatgttgatcacattcccttcagagtcaccaagaaccctcacgatctcgccgttcaacgacacctgagccaccactgctcccttgagcgtcgccttggtcctctcgacgagcgccgggaacgacgcgatgaccctcctcgtcaagctccagcgagagatcaggtccagccatggagacctcacctgcagtttgagcacagaaaattgtaagtttgagcactgaaaatgttgtgtagatgcttatggcagcagaaaggttagagagcagagacctggagaagggcaatccagaagtgaccatctgaacccagccgaatgttgtctggattccccggcaggttgtccacgaagatctctgcctccccagccttctcccctttcagccacactctcaagcatctgaacctgcacttgacaatatcacttcatggtcacttgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0614100, RefSeq:Os07g0614100