Os07g0616500

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0616500| Description = Similar to (S)-2-hydroxy-acid oxidase, peroxisomal (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy ...")
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Gene Name

Os07g0616500

Description

Similar to (S)-2-hydroxy-acid oxidase, peroxisomal (EC 1.1.3.15) (Glycolate oxidase) (GOX) (Short chain alpha-hydroxy acid oxidase)

Version

NM_001066811.1 GI:115473354 GeneID:4343908

Length

4694 bp

Definition

Oryza sativa Japonica Group Os07g0616500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26068557..26073250

Sequence Coding Region

26069824..26069969,26070156..26070280,26070387..26070433,26070529..26070606,26070686..26070810
,26071049..26071109,26071460..26071522,26071999..26072068,26072477..26072682
,26072811..26072990

Expression

GEO Profiles:Os07g0616500

Genome Context

<gbrowseImage1> name=NC_008400:26068557..26073250 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26068557..26073250 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggacaatctaccagtcaatgtccgggagtatcaagaactcgccaaaaaagcgttgccaaagatggcttatgattacatcaatgggggagcagaggatgagcacacactgagggagaatatcgcagcatacacaagaattatattacgacctcgcgttcttgtggatgtgagcaagatagacatgtcaacaactttattaggatacaccatgcgttcacccataattgtggctccaactggggggcacaaattagcacatccagaaggggagaaggctacagcaagagctgcagcatcatgtaacgccataatggttctttccttttcttccagttgcaagattgaggatgttgcctccagttgcaatgccattcgcttttatcagctatatgtgtataagaataggaatgtttcagcaacattagtacggcgggccgagagttgtggattcaaggcacttcttttgacagttgacactcctatgctcggtcggcgtgaagcagatatccgaaacaaaatggttttcccacggagtggtaatctcgaaggtttaatgacaacagatgaccatgataccacaaacggttctcagctcgaacgattcgcacgagcgacgctggatccatcattatcatggaaggatatagagtggctcaagtccataaccagcatgccgatctttctcaagggcatcgtcaccgctgaggacgcgaggagagcagtggaggccggggtggccggcgtgatcgtctccaaccacggcgcgcggcagctggactacgcgccggcgaccatcgccgccctggaagaggtggtcagggcggtggccggcgccgtgccggtgctggtcgacggcggaatccggcgaggcactgacgtgttcaaggccctggcgctcggcgcacgggcggtcatggttgggaggccggtgttcttcgggctggcggcgaggggggaggcaggcgcgaggcacgtgatcgagatgctcaacggcgagctggaggtggccatggcgctctgcggctgccggagcgtcggcgagatcacccgcagccatgtcatgaccgagggtgacaggatcaggtccctgctctga</cdnaseq>

Protein Sequence

<aaseq>MEDNLPVNVREYQELAKKALPKMAYDYINGGAEDEHTLRENIAA YTRIILRPRVLVDVSKIDMSTTLLGYTMRSPIIVAPTGGHKLAHPEGEKATARAAASC NAIMVLSFSSSCKIEDVASSCNAIRFYQLYVYKNRNVSATLVRRAESCGFKALLLTVD TPMLGRREADIRNKMVFPRSGNLEGLMTTDDHDTTNGSQLERFARATLDPSLSWKDIE WLKSITSMPIFLKGIVTAEDARRAVEAGVAGVIVSNHGARQLDYAPATIAALEEVVRA VAGAVPVLVDGGIRRGTDVFKALALGARAVMVGRPVFFGLAARGEAGARHVIEMLNGE LEVAMALCGCRSVGEITRSHVMTEGDRIRSLL</aaseq>

Gene Sequence

<dnaseqindica>1268..1413#1600..1724#1831..1877#1973..2050#2130..2254#2493..2553#2904..2966#3443..3512#3921..4126#4255..4434#actcgtactgtttctgatatcattgattgctatcctcctcctcctccttcctcccctaaatctctagaggtatggtctcactcttacatgtggaatgtttttgcttttgtttttccaatcgaacttgaattcgataaaagaaaacttggtagattatcatgctactgtgaatcttgaatgctcccaacttattgcaataaaggcttgctgttgttcatcagttcttccttatcagctgtttcgacagatttggggtttggtttttaattcagaggaggcattttcttttggttatgatgccaattttggtcgcttactgctccaattaggaccgattttgagtcttccactttggagtttggacatgactggtttggtagtaacttactacgagtgatcaaaatgaactatcccaaatatccttcaatcatgatgcagagttccagtttggtttgcatcctgttcttggtaaccctgaagacagaggagaaaccggtctatccttcctaattatcgcagttgttcagcgttaattcgaagcagaatcaagctatgcttttagaggattgaaaccttatatggattatctacaagaaccctcttcattttgagattgtagcattagtatctattggagtagtttgcagtagcatgccggacttgtcagtgagctgacctgaacaaagaagtactctgaaaagccaattgttcaggatcagtttcaattgaggtatgcaggtcagggaatcaatattgaatttagtagtttgattgtgggggtaattttgctttgctatccccactttattctcaactgtactcactgattgggagtagaaatctactgtttgccgcttttcattgcctgcccccctttgcatgattgcatctatgcagtctcccaataacttgatctattaattgggtaggagatctagtattcatggtagaaagagatgtgtgccaaacagtctgagttgatcctagggcaagtttgagtgatgaagtaatggtatttttcgcagtaaaacatttttagattactaccttcaaaatcgacaagcgtgtcaactcaaaaaatatatgtattgtagtgacatattctggcgtgccattatagtctcacagaaaaattggcattgttttgatggtttgtgtgaatttctgaagatgtatggttaaagacagattttcgatctgaaatgaacattaatatttaccagcagttaaatgtcaatgactttgtaagaatttttgtagtgcagaaatggaggacaatctaccagtcaatgtccgggagtatcaagaactcgccaaaaaagcgttgccaaagatggcttatgattacatcaatgggggagcagaggatgagcacacactgagggagaatatcgcagcatacacaagaattatgtactgtttataccgaattcttaggccataactttattatttttattcttttttatttgtgatgaagtcagagcttcattatgcaaagatgaactaggacttcacattatactgaaaccttaagccagagcttcattattcaacagtgtacttagaccataaattatattggtgtcgattttgcagattacgacctcgcgttcttgtggatgtgagcaagatagacatgtcaacaactttattaggatacaccatgcgttcacccataattgtggctccaactggggggcacaaattagcacatccagaaggtcttaaaactaaaaccttctttcaatttttaaattgtgaattatgtgatgtaattatctaagcactgcagtatctctatttctcttggttgaatgcttatttcaggggagaaggctacagcaagagctgcagcatcatgtaacgccataatggttggtaacaattgacattgttcaggatcatttggtcaaacacttccactttctccatgaattgctacacattttcatatgtttctcatttacaggttctttccttttcttccagttgcaagattgaggatgttgcctccagttgcaatgccattcgcttttatcagctatatgtatggcattcacattttgaaccaaatattttccttttactcctgataatttatctgaaatttgtcataatcattgtaggtgtataagaataggaatgtttcagcaacattagtacggcgggccgagagttgtggattcaaggcacttcttttgacagttgacactcctatgctcggtcggcgtgaagcagatatccgaaacaagtaatatgctaccacaaatattgttctgaagatatattttttagatataacaaagatttcattgagcaaatattgctctgaagattcagtcaattacatatcctctggaaggataaaacttggcaagcatgcataatgcaagatagtagaagtgaatatattcactgatggcattttaggatattgtacagttatcatggtacgaaattctggttactaatttcgattgttcacgcagaatggttttcccacggagtggtaatctcgaaggtttaatgacaacagatgaccatgataccgtgagtgaaatttttcgcttgatagaatctcttatatatgtctcaattaatcagttattttcttgaaacaactaaatgctcatttttttttatttttttttagagaagggtattttctacctggcctctatatccaaccagatatatacggccattgagataggaaacttagccccgcaaacaacccaatctgaaattcgctccataggagatttgaattcagtacctttgggtactactcagtcactaaatgctcatggagaataaaaagaacagaactaacctttttcagatgaactttctttcctccgagaacacttaaacacactatcctcttctcggtttcgcagacaaacggttctcagctcgaacgattcgcacgagcgacgctggatccatcattatcatggaaggtaacaaaggacagcaacaattgatattttgatcatacatacccacattctgcaatgaagtttcagattctgcaccatgtgctcttccggtacttccagcatcttcagaacagcatgaactcatcattgctgaagaaaatcatccatctcatagtacatctacactagacgtattcaaagcccatcctataggaaacagagtgtgctaatcagccactagaacatgcagtgtaacatgctgaaatggtgacaggaacccggcatgacgacactgaccttaaatttcttcagtacttgccatgtgtgttcttgctaggtggtagctgcactgaagtcctctgaattctgaaactgaaagagaggagccacttcattgtggatggatagccagtaggactagtaattaactctgcttgccaaacattttctgacagataataagctatgtgtactgaactttctaaatttttctgcaggatatagagtggctcaagtccataaccagcatgccgatctttctcaagggcatcgtcaccgctgaggacggtaattactccagttcatccatcatcttggtcactgaataattcactgtcatgcatgttaaatatatgtgatccgaattttgggctcatagtatattcgtattagttatgtaatagactctactttataggattagtttcctattaggactcctagatttctcctatatatatcccttataagccgcacagggagggtgcgatagcccaatgtattccctgcgtttgtatccaactcttctatagtgatcattgccggtcggcgcccgtggttttctcccgcaagggttttccacgtaaaattcgtatctccgttgtgcatctattttcataacaatgcaaaattatgaaataaaaactgtcattaagcaagaactgaccggtgaaaacgaaaatgggtggcgtgcagcgaggagagcagtggaggccggggtggccggcgtgatcgtctccaaccacggcgcgcggcagctggactacgcgccggcgaccatcgccgccctggaagaggtggtcagggcggtggccggcgccgtgccggtgctggtcgacggcggaatccggcgaggcactgacgtgttcaaggccctggcgctcggcgcacgggcggtcatggtaaggcagaaacacatttcaatcattcaaaccagcaaaccaatcaaattactaatttatgtaaaatttcttgcgtttcaaacgaaaacttgttcaaacttgttgggggggggggggggggggcgcaggttgggaggccggtgttcttcgggctggcggcgaggggggaggcaggcgcgaggcacgtgatcgagatgctcaacggcgagctggaggtggccatggcgctctgcggctgccggagcgtcggcgagatcacccgcagccatgtcatgaccgagggtgacaggatcaggtccctgctctgatgaatcatttctcatctggccaatgcagcttcaggtctaaaaatacaagtgggctatgggccaacccgtaaaccgatttataggtaataaaatttgaccgacccgtgaatctatttatatgtaaaattagtgggtaatccaaagtctacttatttggtctataactataagtggcttcgcggatcagtccagttacatcatattcaggtctcaatgtgagagactttagtatatgcagtatattgcaattggatttatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0616500, RefSeq:Os07g0616500