Os07g0616200

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0616200| Description = Similar to Beta-ketoacyl-ACP synthase| Version = NM_001066809.1 GI:115473350 GeneID:4343906| Length = 5577 bp| Defi...")
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Gene Name

Os07g0616200

Description

Similar to Beta-ketoacyl-ACP synthase

Version

NM_001066809.1 GI:115473350 GeneID:4343906

Length

5577 bp

Definition

Oryza sativa Japonica Group Os07g0616200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26053181..26058757

Sequence Coding Region

26053707..26053823,26054094..26054153,26055231..26055311,26055384..26055538,26055631..26055715
,26055843..26055911,26056147..26056226,26056357..26056402,26056480..26056575
,26056658..26056768,26056878..26057081,26057167..26057369,26058232..26058448

Expression

GEO Profiles:Os07g0616200

Genome Context

<gbrowseImage1> name=NC_008400:26053181..26058757 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26053181..26058757 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgtggcggtgcccccgctctccgcgtggctcgtcgccgcgcgctcctcgacgcaggcggaatgcggcggcgccgacgagcaccaccaccaccaccatcagcagcagcaccagtgctgcgtcggcggcgggtccagcacggtgatgttcggcccgcgccgccgccgcttcctcggcggcggcgcgcggcggcgcggcgcggcgcgctctggaatggccatggctgttgccctgcagcctgaaaggagaactgttgaaaagaaacctgatgttaaacaaagaagggtggttatcactggcatgggtgtagtaacaccgttgggccatgatcctgatgtgttttacaacaaccttctggatggtgttagtggaataagcgagatagaaaggttcgactgctccacgtttccgacgagaattgcaggagagataaaatccttttctactgatggttgggttgctcctaagctagctaggcgaatggacaagttcatgctatatttgataactgctggaaagaaggcgttggaacatggtggtctcactgaagaactcaggaatgaattggataaaaccagatgcggtgttctcattggttctgcaatgggtggcatgaaggtttttaatgatgcgattgaagcattgagggtctcctacaagaaaatgaacccattttgtgtcccttttgcaactacaaatatgggctctgcaatacttgcaatggatctgggctggatggggccgaactattctatttccaccgcgtgtgctaccagtaatttctgtatcctcaatgcagcaaaccatatcagaagaggggaagctgatgttatgctctgtggtggttctgatgcaccactcatcccaattggattaggaggttttgtggcttgcagagcactttcacagagaaacagtgacccaactaaagcttcccggccatgggatgtggaccgtgacggttttgttatgggggaaggggcaggtgttcttgtgttggaagaacttgaacacgccaagcaaagaggtgcaaaaatatatgctgaatttctaggtggaagcttcacgtgtgatgcataccacatgactgagccacatcctgaaggaagagggattattctttgtatagaaaaggcactggctgattcaggagtagcaagggaagaaatcaactatgtcaatgctcacgcaacgtctacacagtcaggtgatttgaaggagtatgaagctattgtccgctgctttggccagaaccctcagctaagggtgaactcaacaaaatcaatgactggacatctaataggtgcagctggtggaatagaagctgttgctgctattcaagctataagaactggctgggtccatccgaatctgaatttggagaacccagagaaaatagtggatgtgggcgtgctggtcgggtcgcagaaggagagatgcaaagtgaatgtggcactgtcaaactcatttggatttggtgggcacaactcatcaattctgtttgcacccttcaagtga</cdnaseq>

Protein Sequence

<aaseq>MAAVAVPPLSAWLVAARSSTQAECGGADEHHHHHHQQQHQCCVG GGSSTVMFGPRRRRFLGGGARRRGAARSGMAMAVALQPERRTVEKKPDVKQRRVVITG MGVVTPLGHDPDVFYNNLLDGVSGISEIERFDCSTFPTRIAGEIKSFSTDGWVAPKLA RRMDKFMLYLITAGKKALEHGGLTEELRNELDKTRCGVLIGSAMGGMKVFNDAIEALR VSYKKMNPFCVPFATTNMGSAILAMDLGWMGPNYSISTACATSNFCILNAANHIRRGE ADVMLCGGSDAPLIPIGLGGFVACRALSQRNSDPTKASRPWDVDRDGFVMGEGAGVLV LEELEHAKQRGAKIYAEFLGGSFTCDAYHMTEPHPEGRGIILCIEKALADSGVAREEI NYVNAHATSTQSGDLKEYEAIVRCFGQNPQLRVNSTKSMTGHLIGAAGGIEAVAAIQA IRTGWVHPNLNLENPEKIVDVGVLVGSQKERCKVNVALSNSFGFGGHNSSILFAPFK</aaseq>

Gene Sequence

<dnaseqindica>4935..5051#4605..4664#3447..3527#3220..3374#3043..3127#2847..2915#2532..2611#2356..2401#2183..2278#1990..2100#1677..1880#1389..1591#310..526#actccactcctcgccttccactctccacacctcgcctcgcgtcgagcacctggcaatggcggctcacgcgccctcgatgcgccccacccacgccctctcctcgtgagatcgcctgctgcgctctctccccgcgcgcgcgcgcgcctccctccctgtttgttgaatccaagagcgagcccgaccgcatcttggaccctcccctccccgcggttcttggacgacgccggtgcgcgcggtggctctgctgtccccgcgccgcaccgcgccgaatccgagcagaacgcgcgcgcgtcggcggggggatctgcaatggcggccgtggcggtgcccccgctctccgcgtggctcgtcgccgcgcgctcctcgacgcaggcggaatgcggcggcgccgacgagcaccaccaccaccaccatcagcagcagcaccagtgctgcgtcggcggcgggtccagcacggtgatgttcggcccgcgccgccgccgcttcctcggcggcggcgcgcggcggcgcggcgcggcgcgctctggtgagacaacgcacgcacgcgcgccgcccccccccccccctcatttgcctctgcatttgtgtcctgtttgattccgttggatcatcgcggcgaccgtacgtgcgaatcgcggcgcaattcgcgagcctcggttgtatcgccctggggggtaaagacgtgatttttatcccctccgggttttggcgtcacattgtgcgtgtgcatgtgcaaagaagtggagatgtggggaattattctctggcttatgccaaaggatcttggtctagttgcgagtgatagtttttttttttttttttttttaatatccgtttggggttttggttatctcgtcgccaggttcccttctgcttcatgggatgcatacatttctgctgaattagtctgttcctcatcgctttcgtttagcttagttgtccttggattgtttttactccatctcttgatagcacagaggtttgaccggatgattgagacagaattagcttggattagtatggagtacaaggtgacttgtttaagttaatggtgtgaaagactccaaataggttgaaaaaaaaatatttgagtaggaaacacagctttaaacttgaattgccaatgttgcattccggtttaaattttaatgcatgtttcttgaatcaccaaaaggcattaaactttgtagttttttgaacgaattgttttatatagtgatgggctgatgggcaattgcaagttggtgcttgagaaaacgtctagctaatgtgcatgtttgtggagactgtcactgcttgtttgtttcgtctgctgctggtttatgatatgtgctgactcaagcagacaatgagacaagggtctaaaggaaattcattgccatttgcaggaatggccatggctgttgccctgcagcctgaaaggagaactgttgaaaagaaacctgatgttaaacaaagaagggtggttatcactggcatgggtgtagtaacaccgttgggccatgatcctgatgtgttttacaacaaccttctggatggtgttagtggaataagcgagatagaaaggttcgactgctccacgtttccgacggtaatacagatggttttcttcctgtcatggatatgggggcatgaatattttcatgcagcagttgacatgttgaactcttctacagagaattgcaggagagataaaatccttttctactgatggttgggttgctcctaagctagctaggcgaatggacaagttcatgctatatttgataactgctggaaagaaggcgttggaacatggtggtctcactgaagaactcaggaatgaattggataaaaccagatgcggtgttctcattggttctgcaatgggtggcatgaaggtttagtttcttgtactaatattagttttattcctaaacaaattttcacatttgataaaaaaaacatgttttcctcaatttcacacatttaagatgcaacattgagcaggtttttaatgatgcgattgaagcattgagggtctcctacaagaaaatgaacccattttgtgtcccttttgcaactacaaatatgggctctgcaatacttgcaatggatctggtgtgatatttttttgcgtaaagtttttaagtggttaacaatgactatggttcttgatgtctcatatttcattgtttcatagggctggatggggccgaactattctatttccaccgcgtgtgctaccagtaatttctgtatcctcaatgcagcaaaccatatcagaagaggggaagctgtaagtaattttgtattttcacgatctcttctacaagtgagcaaaaatcttgtttgaccttgtttctaatcttacaggatgttatgctctgtggtggttctgatgcaccactcatcccaattggtatgggtcctgatcattgttgaaagtagctaccattattttcaattcccactgttgttctttctcctctagtcttccacggcttatcaatcgttgctgtttgaaatgtttaataaactattgcatgcaggattaggaggttttgtggcttgcagagcactttcacagagaaacagtgacccaactaaagcttcccggccatgggatgtggttagtatattttgatgtgcatattttggtcttgtcattgtagctaataatttacttcacaagcatgcaaaaagctcatttactgcaagtgacaagtttcttggccaaatggcaatgatttattacctgttttttctattgtcattcaacacatcccaacataacagcagcttgtagacatataactgtttgagaaagtgatcttactgattttggtgcatgcaatgtgttgcaggaccgtgacggttttgttatgggggaaggggcaggtgttcttgtgttggaagaacttgaacacgccaaggtttgttacatgcaatcacctttctcccttttcatatagatctatttgagccccttttccccagttaagtgccttgtagttatgttcaaacagtaaggttttctgatatggatgcaccattctgcagcaaagaggtgcaaaaatatatgctgaatttctaggtggaagcttcacgtgtgatgcataccacatgactgagccacatcctgaaggttaaatgtgcatctggctttgttgctgttatcctcttactgacctaaatctaataccttctgatgccaatctgatcatgaataaatatcaggaagagggattattctttgtatagaaaaggcactggctgattcaggagtagcaagggaagaaatcaactatgtcaatgctcacgcaacgtctacacagtcaggtgatttgaaggagtatgaagctattgtccgctgctttggccagaaccctcaggtatacgtgctatcataatggttgtagtgattttatgaattaaaccaagtaaaaaaaatggtgtgcgtgcagctaagggtgaactcaacaaaatcaatgactggacatctaataggtgcagctggtggaatagaagctgttgctgctattcaagtaaggaagttcattccctatcacagtttttatgctcaaaataaattatcactggtatttaaaattttatcttctggcctttgtctattccttgttgattttcctgaatttttccctatgaacactatatatttcaaaatgttgatctggactgtatagtcctttctagagcagttggctatagcagtaaggaaaaaagcttttcatttggctaattgatatacatctgatataatttgtacaaaatgggagcacatgtaagtgtatgaccagtgtcaaccagcctttgcatggccagttcgtatatcgcagtaccattgatcaatcactgagaaatatgtgatagtttatttggagttctgtatgagataccaatttccaaattagggactgtcaaaagaaaagcatcaagcaacataaagaaccattgaacaatatctcaaggctaatatagaattgtactgaatgtataatatgtcccatatatcggcatgtccttaaacagctgcatttctggaaattttatcacttttaagcacgaaacccaaatattttcatctagttgagtgtttgtaaaaaaagggggttctgcatgaattcagtactgaccaactccagtactgttgtaagtcatgattccgtgcacttagtgaacttctataaagctcaactgcaaatcttctaccgttttggtgctctggattgttgcacaagcaggtggtgcatctaaagttagcattatccaccatctctctttgtttttgttttttttttcgaaaaaaaggtgcttggtgtagcactttaaaactgtctgcctagttggtactgtattatggataaaactactccaaaatgtacattcttttattggttccttttggtaaggtctgcttggatttcatattcatatagtcaatgatttgtctttcaatttcatattgcacttcagttaggatgctttgaattcagcgagcgtgaattccaatgcctttgcataggatttatcatatttttcaatgtgaatatattggactctgcatggttatgttcctcattgtttggtactgttgcttgcaggctataagaactggctgggtccatccgaatctgaatttggagaacccagagaaaatagtggtaagctctttgcttgcaaactacatacttcaactgtagatacacccttttgggcatttttagggaaaaatgtcataatagaatctggtatgcctcgttgagaatattaatgagagatttagtatacttcctgccaaacatctcgctgctactaagctagatatgaaattacaagtttgaagaaaaatatagaagtgacttgaattgcccacaacgtcagttagagctgatctcactcaatgaatgttctaattttcaatcgcgacacaggatgtgggcgtgctggtcgggtcgcagaaggagagatgcaaagtgaatgtggcactgtcaaactcatttggatttggtgggcacaactcatcaattctgtttgcacccttcaagtgaactcggcctacgattatcgcttgctccctcaaatttccaaccgcgccatggtaccggaaccgcgtatagaaaactagcaagcaagtgaattcatggcttacacatgctatgaataattgaacatgaaggtccaagctaagaagagcattgtgccatacaacaacagagtgaagaaagtaagaaaccatagaggccatgtccatggcatgaccactcctaagtttcattttgtatcaccatcgcaaatacatccctggaaaagtcctggatttcctttttctcaagtgaagaagaatatgatgtagcctatggcctatgttattactttgtttatctcatctaggaggactttgtgtatcctacctgggccggtaatttttttttcttttttcgcctcacctcagaacccttctctagatttggcatagttgatgagagtgaggatgctttgcagtacagaggtgctgtcatttgatgttgtattgatgatgtttattagtaactttggctactcatattagccgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0616200, RefSeq:Os07g0616200