Os07g0618600

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Revision as of 08:46, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0618600| Description = Zinc finger, FYVE-type domain containing protein| Version = NM_001066823.1 GI:115473378 GeneID:4343920| Length = 320...")
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Gene Name

Os07g0618600

Description

Zinc finger, FYVE-type domain containing protein

Version

NM_001066823.1 GI:115473378 GeneID:4343920

Length

3204 bp

Definition

Oryza sativa Japonica Group Os07g0618600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:26191098..26194301

Sequence Coding Region

26191279..26191362,26191513..26191569,26191710..26191777,26191924..26192128,26192199..26192323
,26192602..26192677,26192802..26192861,26192923..26192973,26193400..26193478
,26193920..26194008

Expression

GEO Profiles:Os07g0618600

Genome Context

<gbrowseImage1> name=NC_008400:26191098..26194301 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:26191098..26194301 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggagacgccgccgccgttccaggagtccgcccactgcgacgtctgccgctgcaccttcaccaccttccgccgccgccatcactgccgcaactgcgggaggacgctctgccacgagcactcgtcgtaccatatggctctcccacagtacgggatatacacggacgtcagagtctgctatgattgcttcaacaaatcctccagtcgtggtggtgttggcaatgccggttcacctgggagtgtatctagtgcagctgactccttttcagggttaaacttgggggaagatgatgcttcatcacctatgaaaaattcagcgtttcacagtgcacctgctgttattgagtgcaaatgtggaatgcctttgtgtatatgcgaggctccgaaaccagaacctgtgcctgtaaagcagagtatcagcacaacttcctcaagtgcacagtcgaatcctaggccaaaaaaatcttctaccaatcaacaatctgctgaatcaagtgtcaagaaggcttcggccacttcaagcagcaactcaagctcattcttaaatcttggcctgatgagcaatgatactaatgataagggtccttctgaatatgatgttactggggagggactgagggaagcaattaagagtggggatattaaagctgtcaagaaacttctcagccagggagtggattctaattactgcgataagcaaggatttgctttgctacatttggctgcactatttaaccagacagagattgctcttattctcatggataatggagcaaatattcagagcaaaaatggacaaggggaaactcctttggattgtgctccagccatgctgcaatacaagatgcgccagaggatggaagaacttgcggcatcacaacgaccctag</cdnaseq>

Protein Sequence

<aaseq>MAMETPPPFQESAHCDVCRCTFTTFRRRHHCRNCGRTLCHEHSS YHMALPQYGIYTDVRVCYDCFNKSSSRGGVGNAGSPGSVSSAADSFSGLNLGEDDASS PMKNSAFHSAPAVIECKCGMPLCICEAPKPEPVPVKQSISTTSSSAQSNPRPKKSSTN QQSAESSVKKASATSSSNSSSFLNLGLMSNDTNDKGPSEYDVTGEGLREAIKSGDIKA VKKLLSQGVDSNYCDKQGFALLHLAALFNQTEIALILMDNGANIQSKNGQGETPLDCA PAMLQYKMRQRMEELAASQRP</aaseq>

Gene Sequence

<dnaseqindica>182..265#416..472#613..680#827..1031#1102..1226#1505..1580#1705..1764#1826..1876#2303..2381#2823..2911#ctcccggactcccggtctaccccgacgccgcggcgcggctgcttcctctcatcgattccgcctcagatcggggaggaatcgcggcgagatcggccgctccgaatccgatccgcgcacgtggtctcgccggcggggtcaggttggttcgcgggagccgccgccgccgccgccgacgacgacgatggccatggagacgccgccgccgttccaggagtccgcccactgcgacgtctgccgctgcaccttcaccaccttccgccgccgcgtacgaatcttcctctcccttatccctctccctcgctccgtgggtggatcgcctatggcgtgagtcggatcgtggatcgctacttgggtagcagtgggggagagtatcgtgttctctgatttgctgacggattttacgctgttgttgcagcatcactgccgcaactgcgggaggacgctctgccacgagcactcgtcgtaccatatggtgagaactcagtaaactgaggatgttttggtgtgattccgtgggaaatttgtgcttgatctactagcagtgcaagtgcctggggagtttgggtttgcggttttgaatcatttgcttcaacttcaattggttggttgcaggctctcccacagtacgggatatacacggacgtcagagtctgctatgattgcttcaacaaatcctccaggtagccagcctatgatttattttactgctagaatctaactgtctactcacttgtatttgggttaggtataactgaataagcagctttccttgatcacctccgagcgcaccctgtataatttacttatgtcctgtataatgttgcagtcgtggtggtgttggcaatgccggttcacctgggagtgtatctagtgcagctgactccttttcagggttaaacttgggggaagatgatgcttcatcacctatgaaaaattcagcgtttcacagtgcacctgctgttattgagtgcaaatgtggaatgcctttgtgtatatgcgaggctccgaaaccagaacctgtgcctgtaaaggtagatgacagtccattttattttatcaacacctaagttttgtgtgcctccgcctaacgagcatatgcagcagagtatcagcacaacttcctcaagtgcacagtcgaatcctaggccaaaaaaatcttctaccaatcaacaatctgctgaatcaagtgtcaagaaggcttcggccacttcaagcagcaactcaaggttcgttagaattcactttcttgtattctgaagagaaatgcttgacttattattgtgatatatatctctattaagtattatcctttgtagtacactgtgccaaaatacgctcagctttatttggcaagatctagaagcatgttctggtcattatctcactgccaccttttctgcacgcttgttttgtaatcaaaactttgacatatctgcattaggcataggtgttcaaactgatcctcagatctcttgggtataatcttattattattgtattgcagctcattcttaaatcttggcctgatgagcaatgatactaatgataagggtccttctgaatatgatgttactggggaggtaagtttgtttaaaagaatacctcaacagctcctttctattctatttttcagcatacagtacaaggtggtatttctggcctggcaagtttaagtctgtctaacccagttattactccttgtagggactgagggaagcaattaagagtggggatattaaagctgtcaagaaacttctcagccaggtaatgttgtcctctcttgtctgattttgtcatcttgattcttacctccaacattgggcagggagtggattctaattactgcgataagcaaggatttgctttgctacatttggtatgtgcccttttattatgtcccttttggttgacttttattgttgtatcattttcttaaatacctccataaatctgttcatacaagataacaagagtaacagaatttgctgtgtaaagacaagcacatccatgcatcaggataacatacaacaagaatgcattgtactgtgcattaggataacatacaacagaatgcaataggtactgaaaataacctatcttctgatcaatgaaatatccaagaaagacttctttaaaacaatctattttttttatcgattagttgcttccttatgtgtaaatttccatacaattgacaaaccttcatcccggcatgaacacttatcccagttcatttgtaaattatctagttgtaatacatatgatcactgtctaacatacatccttttctggacaattgcaggctgcactatttaaccagacagagattgctcttattctcatggataatggagcaaatattcagagcaaaaatggacaaggttgcttctttttactacttgaacccattcatataagcacagaagatcatttaaatacattatctcccattttcagtcccacccttgttttctgcaatttgcttgaattgcacgttagcttcgatgacctcaggggccttttatgcttttactgtatttatgttcctcaaggtcaggcaggcttgggtagaatagaagcagtactatgtacctgggctacctgttatgtttagctgatgtaacaagtgcctttttgataagtttatcttgttgtagcagattttttggattattaaacgctagaccgttttgggtcaggattacgttataccaaatcctagcctcgagacaaatgctcatttcagctcatctgtagatatttctgccagcgcctggagttgttaacaaatgctaacaatcgtcatgaatttcgttgcgcaggggaaactcctttggattgtgctccagccatgctgcaatacaagatgcgccagaggatggaagaacttgcggcatcacaacgaccctagtgatatttttctcctcttgttcatgtgccaaagatggtgcccccccttgcatggcccagaataaaaccatttttaccaaccgaggggcctctttgctgtgggtatagtagtatttctgttggcaccatcgcctacaaaatgtcaaaacaacaccagctcataaactgcatgtttcgccagctaaaaaaataattcattgtgcttaatcttgccatgtcatcgtgcatacatatgttcatgtatatgtaatcatatgtcctggtttattattagcattggtctgaagaaaatct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0618600, RefSeq:Os07g0618600